RNA–Protein interactions for RNA: ENST00000304778.11

LONRF3-201, Transcript of LON peptidase N-terminal domain and ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene LONRF3, Length 2,989 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3-201ENST00000304778 SLC25A41Q8N5S1 370 aa16.65■□□□□ 0.26
LONRF3-201ENST00000304778 STKLD1Q8NE28 680 aa16.65■□□□□ 0.26
LONRF3-201ENST00000304778 NSL1Q96IY1 281 aa16.65■□□□□ 0.26
LONRF3-201ENST00000304778 CNPY3Q9BT09 278 aa16.65■□□□□ 0.26
LONRF3-201ENST00000304778 PAK5Q9P286 719 aa16.65■□□□□ 0.26
LONRF3-201ENST00000304778 HSFX1Q9UBD0 423 aa16.65■□□□□ 0.26
LONRF3-201ENST00000304778 TTLL3Q9Y4R7 772 aa16.65■□□□□ 0.26
LONRF3-201ENST00000304778 MANSC4A6NHS7 340 aaPredicted RBP16.65■□□□□ 0.26
LONRF3-201ENST00000304778 H7C0C1 242 aa16.65■□□□□ 0.26
LONRF3-201ENST00000304778 HAS3O00219 553 aa16.65■□□□□ 0.26
LONRF3-201ENST00000304778 KLF11O14901 512 aa16.65■□□□□ 0.26
LONRF3-201ENST00000304778 AVILO75366 819 aa16.65■□□□□ 0.26
LONRF3-201ENST00000304778 RECQL4O94761 1208 aa16.65■□□□□ 0.26
LONRF3-201ENST00000304778 USP1O94782 785 aa16.65■□□□□ 0.26
LONRF3-201ENST00000304778 ATP5OP48047 213 aa16.65■□□□□ 0.26
LONRF3-201ENST00000304778 YWHAZP63104 245 aaKnown RBP16.65■□□□□ 0.26
LONRF3-201ENST00000304778 SH3PXD2AQ5TCZ1 1133 aa16.65■□□□□ 0.26
LONRF3-201ENST00000304778 TTC39BQ5VTQ0 682 aaPredicted RBP16.65■□□□□ 0.26
LONRF3-201ENST00000304778 LCLAT1Q6UWP7 414 aa16.65■□□□□ 0.26
LONRF3-201ENST00000304778 C17orf99Q6UX52 265 aa16.65■□□□□ 0.26
LONRF3-201ENST00000304778 NAT14Q8WUY8 206 aa16.65■□□□□ 0.26
LONRF3-201ENST00000304778 ZNF395Q9H8N7 513 aaPredicted RBP16.65■□□□□ 0.26
LONRF3-201ENST00000304778 GJD2Q9UKL4 321 aa16.65■□□□□ 0.26
LONRF3-201ENST00000304778 TRIP11Q15643 1979 aa16.64■□□□□ 0.26
LONRF3-201ENST00000304778 PFKMP08237 780 aa16.64■□□□□ 0.25
LONRF3-201ENST00000304778 ITGA2BP08514 1039 aa16.64■□□□□ 0.25
LONRF3-201ENST00000304778 CPT1AP50416 773 aa16.64■□□□□ 0.25
LONRF3-201ENST00000304778 ZBTB16Q05516 673 aa16.64■□□□□ 0.25
LONRF3-201ENST00000304778 IRF5Q13568 498 aa16.64■□□□□ 0.25
LONRF3-201ENST00000304778 SNX17Q15036 470 aa16.64■□□□□ 0.25
LONRF3-201ENST00000304778 CFAP157Q5JU67 520 aa16.64■□□□□ 0.25
LONRF3-201ENST00000304778 ALKAL1Q6UXT8 129 aa16.64■□□□□ 0.25
LONRF3-201ENST00000304778 PRPF39Q86UA1 669 aaKnown RBP16.64■□□□□ 0.25
LONRF3-201ENST00000304778 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.64■□□□□ 0.25
LONRF3-201ENST00000304778 NMD3Q96D46 503 aaKnown RBP16.64■□□□□ 0.25
LONRF3-201ENST00000304778 CFAP36Q96G28 342 aa16.64■□□□□ 0.25
LONRF3-201ENST00000304778 FRMD8Q9BZ67 464 aaPredicted RBP16.64■□□□□ 0.25
LONRF3-201ENST00000304778 AP5M1Q9H0R1 490 aa16.64■□□□□ 0.25
LONRF3-201ENST00000304778 RAB6BQ9NRW1 208 aa16.64■□□□□ 0.25
LONRF3-201ENST00000304778 TAS2R1Q9NYW7 299 aa16.64■□□□□ 0.25
LONRF3-201ENST00000304778 KIAA1257Q9ULG3 409 aa16.64■□□□□ 0.25
LONRF3-201ENST00000304778 PIN4Q9Y237 131 aaKnown RBP16.64■□□□□ 0.25
LONRF3-201ENST00000304778 NME7Q9Y5B8 376 aa16.64■□□□□ 0.25
LONRF3-201ENST00000304778 GMEB1Q9Y692 573 aa16.64■□□□□ 0.25
LONRF3-201ENST00000304778 C2CD4BA6NLJ0 364 aa16.64■□□□□ 0.25
LONRF3-201ENST00000304778 COPEO14579 308 aa16.64■□□□□ 0.25
LONRF3-201ENST00000304778 FAM155BO75949 473 aa16.64■□□□□ 0.25
LONRF3-201ENST00000304778 KRT72Q14CN4 511 aa16.64■□□□□ 0.25
LONRF3-201ENST00000304778 GOLGA7BQ2TAP0 167 aa16.64■□□□□ 0.25
LONRF3-201ENST00000304778 TRNP1Q6NT89 227 aa16.64■□□□□ 0.25
LONRF3-201ENST00000304778 ACOT1Q86TX2 421 aa16.64■□□□□ 0.25
LONRF3-201ENST00000304778 ALYREFQ86V81 257 aaKnown RBP16.64■□□□□ 0.25
LONRF3-201ENST00000304778 TTC39CQ8N584 583 aa16.64■□□□□ 0.25
LONRF3-201ENST00000304778 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.64■□□□□ 0.25
LONRF3-201ENST00000304778 BEST2Q8NFU1 509 aa16.64■□□□□ 0.25
LONRF3-201ENST00000304778 RTP4Q96DX8 246 aa16.64■□□□□ 0.25
LONRF3-201ENST00000304778 OLFM3Q96PB7 478 aa16.64■□□□□ 0.25
LONRF3-201ENST00000304778 RNF157Q96PX1 679 aa16.64■□□□□ 0.25
LONRF3-201ENST00000304778 SRPK1Q96SB4 655 aaKnown RBP16.64■□□□□ 0.25
LONRF3-201ENST00000304778 MIS12Q9H081 205 aa16.64■□□□□ 0.25
LONRF3-201ENST00000304778 IQCGQ9H095 443 aaKnown RBP16.64■□□□□ 0.25
LONRF3-201ENST00000304778 USP29Q9HBJ7 922 aa16.64■□□□□ 0.25
LONRF3-201ENST00000304778 KLK14Q9P0G3 267 aa16.64■□□□□ 0.25
LONRF3-201ENST00000304778 TRIM49D1C9J1S8 452 aa16.63■□□□□ 0.25
LONRF3-201ENST00000304778 E5RJQ4 531 aa16.63■□□□□ 0.25
LONRF3-201ENST00000304778 RNASEH1O60930 286 aaKnown RBP16.63■□□□□ 0.25
LONRF3-201ENST00000304778 TMCC1O94876 653 aa16.63■□□□□ 0.25
LONRF3-201ENST00000304778 VAV1P15498 845 aa16.63■□□□□ 0.25
LONRF3-201ENST00000304778 MAP7Q14244 749 aa16.63■□□□□ 0.25
LONRF3-201ENST00000304778 LRRC36Q1X8D7 754 aa16.63■□□□□ 0.25
LONRF3-201ENST00000304778 RAB6CQ53S08 254 aa16.63■□□□□ 0.25
LONRF3-201ENST00000304778 PPP1R26Q5T8A7 1209 aaPredicted RBP16.63■□□□□ 0.25
LONRF3-201ENST00000304778 MPP4Q96JB8 637 aa16.63■□□□□ 0.25
LONRF3-201ENST00000304778 RAB6CQ9H0N0 254 aa16.63■□□□□ 0.25
LONRF3-201ENST00000304778 ZNF180Q9UJW8 692 aa16.63■□□□□ 0.25
LONRF3-201ENST00000304778 PRPSAP2O60256 369 aa16.63■□□□□ 0.25
LONRF3-201ENST00000304778 MYL2P10916 166 aa16.63■□□□□ 0.25
LONRF3-201ENST00000304778 RGS7P49802 495 aa16.63■□□□□ 0.25
LONRF3-201ENST00000304778 DSG1Q02413 1049 aa16.63■□□□□ 0.25
LONRF3-201ENST00000304778 PCBP1Q15365 356 aaKnown RBP eCLIP16.63■□□□□ 0.25
LONRF3-201ENST00000304778 C15orf59Q2T9L4 293 aaPredicted RBP16.63■□□□□ 0.25
LONRF3-201ENST00000304778 OR6B2Q6IFH4 312 aa16.63■□□□□ 0.25
LONRF3-201ENST00000304778 C1orf228Q6PIY5 440 aa16.63■□□□□ 0.25
LONRF3-201ENST00000304778 ST13P4Q8IZP2 240 aaPredicted RBP16.63■□□□□ 0.25
LONRF3-201ENST00000304778 RXFP2Q8WXD0 754 aa16.63■□□□□ 0.25
LONRF3-201ENST00000304778 PIWIL1Q96J94 861 aaKnown RBP16.63■□□□□ 0.25
LONRF3-201ENST00000304778 RNF39Q9H2S5 420 aa16.63■□□□□ 0.25
LONRF3-201ENST00000304778 FAM124BQ9H5Z6 455 aaPredicted RBP16.63■□□□□ 0.25
LONRF3-201ENST00000304778 POPDC2Q9HBU9 364 aa16.63■□□□□ 0.25
LONRF3-201ENST00000304778 SCN1AP35498 2009 aa16.63■□□□□ 0.25
LONRF3-201ENST00000304778 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.62■□□□□ 0.25
LONRF3-201ENST00000304778 KCNN4O15554 427 aa16.62■□□□□ 0.25
LONRF3-201ENST00000304778 OPHN1O60890 802 aa16.62■□□□□ 0.25
LONRF3-201ENST00000304778 PDGFRAP16234 1089 aa16.62■□□□□ 0.25
LONRF3-201ENST00000304778 RGS2P41220 211 aa16.62■□□□□ 0.25
LONRF3-201ENST00000304778 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.62■□□□□ 0.25
LONRF3-201ENST00000304778 C9orf57Q5W0N0 161 aa16.62■□□□□ 0.25
LONRF3-201ENST00000304778 FAM91A1Q658Y4 838 aa16.62■□□□□ 0.25
LONRF3-201ENST00000304778 CDHR3Q6ZTQ4 885 aa16.62■□□□□ 0.25
LONRF3-201ENST00000304778 FAM183BPQ6ZVS7 135 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms