RNA–Protein interactions for RNA: ENST00000300413.9

SNRPD1-201, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD1, Length 4,909 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-201ENST00000300413 CRLS1Q9UJA2 301 aa8.54□□□□□ -1.04
SNRPD1-201ENST00000300413 TNS1Q9HBL0 1735 aaKnown RBP8.54□□□□□ -1.04
SNRPD1-201ENST00000300413 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.54□□□□□ -1.04
SNRPD1-201ENST00000300413 CBX4O00257 560 aa8.54□□□□□ -1.04
SNRPD1-201ENST00000300413 DNALI1O14645 258 aaPredicted RBP8.54□□□□□ -1.04
SNRPD1-201ENST00000300413 DNAJC6O75061 913 aa8.54□□□□□ -1.04
SNRPD1-201ENST00000300413 GPR32O75388 356 aa8.54□□□□□ -1.04
SNRPD1-201ENST00000300413 FGFR1P11362 822 aa8.54□□□□□ -1.04
SNRPD1-201ENST00000300413 AKT1P31749 480 aa8.54□□□□□ -1.04
SNRPD1-201ENST00000300413 KCNJ1P48048 391 aa8.54□□□□□ -1.04
SNRPD1-201ENST00000300413 LBX1P52954 281 aa8.54□□□□□ -1.04
SNRPD1-201ENST00000300413 MPPE1Q53F39 396 aa8.54□□□□□ -1.04
SNRPD1-201ENST00000300413 PLPP4Q5VZY2 271 aa8.54□□□□□ -1.04
SNRPD1-201ENST00000300413 HGSNATQ68CP4 663 aa8.54□□□□□ -1.04
SNRPD1-201ENST00000300413 COLGALT1Q8NBJ5 622 aa8.54□□□□□ -1.04
SNRPD1-201ENST00000300413 BCAS4Q8TDM0 211 aa8.54□□□□□ -1.04
SNRPD1-201ENST00000300413 TRIM55Q9BYV6 548 aa8.54□□□□□ -1.04
SNRPD1-201ENST00000300413 PABPC3Q9H361 631 aaKnown RBP8.54□□□□□ -1.04
SNRPD1-201ENST00000300413 SLC24A2Q9UI40 661 aa8.54□□□□□ -1.04
SNRPD1-201ENST00000300413 MOSPD1Q9UJG1 213 aa8.54□□□□□ -1.04
SNRPD1-201ENST00000300413 VNN1O95497 513 aa8.53□□□□□ -1.04
SNRPD1-201ENST00000300413 IQCF3P0C7M6 154 aa8.53□□□□□ -1.04
SNRPD1-201ENST00000300413 VCLP18206 1134 aa8.53□□□□□ -1.04
SNRPD1-201ENST00000300413 MAP4P27816 1152 aaKnown RBP8.53□□□□□ -1.04
SNRPD1-201ENST00000300413 SLC5A3P53794 718 aa8.53□□□□□ -1.04
SNRPD1-201ENST00000300413 DUSP4Q13115 394 aa8.53□□□□□ -1.04
SNRPD1-201ENST00000300413 PCSK7Q16549 785 aa8.53□□□□□ -1.04
SNRPD1-201ENST00000300413 SCARA3Q6AZY7 606 aa8.53□□□□□ -1.04
SNRPD1-201ENST00000300413 SLC39A4Q6P5W5 647 aa8.53□□□□□ -1.04
SNRPD1-201ENST00000300413 PPFIBP2Q8ND30 876 aa8.53□□□□□ -1.04
SNRPD1-201ENST00000300413 OVCA2Q8WZ82 227 aa8.53□□□□□ -1.04
SNRPD1-201ENST00000300413 PBXIP1Q96AQ6 731 aa8.53□□□□□ -1.04
SNRPD1-201ENST00000300413 SCLYQ96I15 445 aa8.53□□□□□ -1.04
SNRPD1-201ENST00000300413 DDX23Q9BUQ8 820 aaKnown RBP8.53□□□□□ -1.04
SNRPD1-201ENST00000300413 CIPCQ9C0C6 399 aa8.53□□□□□ -1.04
SNRPD1-201ENST00000300413 NOCTQ9UK39 431 aaKnown RBP8.53□□□□□ -1.04
SNRPD1-201ENST00000300413 HEATR9A2RTY3 570 aa8.53□□□□□ -1.04
SNRPD1-201ENST00000300413 KIF3CO14782 793 aa8.53□□□□□ -1.04
SNRPD1-201ENST00000300413 PMPCBO75439 489 aa8.53□□□□□ -1.04
SNRPD1-201ENST00000300413 NFATC1O95644 943 aa8.53□□□□□ -1.04
SNRPD1-201ENST00000300413 PYGMP11217 842 aa8.53□□□□□ -1.04
SNRPD1-201ENST00000300413 GABRR2P28476 465 aa8.53□□□□□ -1.04
SNRPD1-201ENST00000300413 SERPINA4P29622 427 aa8.53□□□□□ -1.04
SNRPD1-201ENST00000300413 SNRPD1P62314 119 aaKnown RBP8.53□□□□□ -1.04
SNRPD1-201ENST00000300413 SMAD3P84022 425 aaKnown RBP8.53□□□□□ -1.04
SNRPD1-201ENST00000300413 TMPRSS15P98073 1019 aa8.53□□□□□ -1.04
SNRPD1-201ENST00000300413 ZC3H12AQ5D1E8 599 aaKnown RBP8.53□□□□□ -1.04
SNRPD1-201ENST00000300413 FSCBQ5H9T9 825 aa8.53□□□□□ -1.04
SNRPD1-201ENST00000300413 PTRHD1Q6GMV3 140 aaKnown RBP8.53□□□□□ -1.04
SNRPD1-201ENST00000300413 TRIM67Q6ZTA4 783 aa8.53□□□□□ -1.04
SNRPD1-201ENST00000300413 C3orf62Q6ZUJ4 267 aa8.53□□□□□ -1.04
SNRPD1-201ENST00000300413 MRPL10Q7Z7H8 261 aaKnown RBP8.53□□□□□ -1.04
SNRPD1-201ENST00000300413 MCUQ8NE86 351 aa8.53□□□□□ -1.04
SNRPD1-201ENST00000300413 ULK4Q96C45 1275 aa8.53□□□□□ -1.04
SNRPD1-201ENST00000300413 C8orf48Q96LL4 319 aa8.53□□□□□ -1.04
SNRPD1-201ENST00000300413 ZBTB18Q99592 522 aa8.53□□□□□ -1.04
SNRPD1-201ENST00000300413 RAD9AQ99638 391 aa8.53□□□□□ -1.04
SNRPD1-201ENST00000300413 CENPKQ9BS16 269 aa8.53□□□□□ -1.04
SNRPD1-201ENST00000300413 APOBEC3GQ9HC16 384 aaKnown RBP8.53□□□□□ -1.04
SNRPD1-201ENST00000300413 SIX2Q9NPC8 291 aa8.53□□□□□ -1.04
SNRPD1-201ENST00000300413 TRIM33Q9UPN9 1127 aa8.53□□□□□ -1.04
SNRPD1-201ENST00000300413 TBC1D4O60343 1298 aa8.53□□□□□ -1.04
SNRPD1-201ENST00000300413 ITGAVP06756 1048 aa8.53□□□□□ -1.04
SNRPD1-201ENST00000300413 MMP13P45452 471 aa8.53□□□□□ -1.04
SNRPD1-201ENST00000300413 PHEXP78562 749 aa8.53□□□□□ -1.04
SNRPD1-201ENST00000300413 TSTA3Q13630 321 aaPredicted RBP8.53□□□□□ -1.04
SNRPD1-201ENST00000300413 PARP15Q460N3 678 aa8.53□□□□□ -1.04
SNRPD1-201ENST00000300413 TIGD5Q53EQ6 642 aa8.53□□□□□ -1.04
SNRPD1-201ENST00000300413 RFX8Q6ZV50 586 aa8.53□□□□□ -1.04
SNRPD1-201ENST00000300413 LRRC6Q86X45 466 aa8.53□□□□□ -1.04
SNRPD1-201ENST00000300413 GPATCH11Q8N954 259 aa8.53□□□□□ -1.04
SNRPD1-201ENST00000300413 SMG7Q92540 1137 aaKnown RBP8.53□□□□□ -1.04
SNRPD1-201ENST00000300413 BCAS3Q9H6U6 928 aa8.53□□□□□ -1.04
SNRPD1-201ENST00000300413 NRDE2Q9H7Z3 1164 aa8.53□□□□□ -1.04
SNRPD1-201ENST00000300413 NT5MQ9NPB1 228 aa8.53□□□□□ -1.04
SNRPD1-201ENST00000300413 SMPD4Q9NXE4 827 aa8.53□□□□□ -1.04
SNRPD1-201ENST00000300413 TAS2R14Q9NYV8 317 aa8.53□□□□□ -1.04
SNRPD1-201ENST00000300413 CHMP2BQ9UQN3 213 aa8.53□□□□□ -1.04
SNRPD1-201ENST00000300413 A0A0A0MRY4 1105 aa8.53□□□□□ -1.04
SNRPD1-201ENST00000300413 ENPP3O14638 875 aa8.53□□□□□ -1.04
SNRPD1-201ENST00000300413 CHADO15335 359 aa8.53□□□□□ -1.04
SNRPD1-201ENST00000300413 DCTN3O75935 186 aa8.53□□□□□ -1.04
SNRPD1-201ENST00000300413 AMPD1P23109 780 aa8.53□□□□□ -1.04
SNRPD1-201ENST00000300413 TAF10Q12962 218 aa8.53□□□□□ -1.04
SNRPD1-201ENST00000300413 TRIP4Q15650 581 aaPredicted RBP8.53□□□□□ -1.04
SNRPD1-201ENST00000300413 TBCCQ15814 346 aa8.53□□□□□ -1.04
SNRPD1-201ENST00000300413 ACAD11Q709F0 780 aa8.53□□□□□ -1.04
SNRPD1-201ENST00000300413 CPA6Q8N4T0 437 aa8.53□□□□□ -1.04
SNRPD1-201ENST00000300413 C12orf29Q8N999 325 aa8.53□□□□□ -1.04
SNRPD1-201ENST00000300413 E2F7Q96AV8 911 aa8.53□□□□□ -1.04
SNRPD1-201ENST00000300413 CCDC126Q96EE4 140 aa8.53□□□□□ -1.04
SNRPD1-201ENST00000300413 PCED1BQ96HM7 432 aa8.53□□□□□ -1.04
SNRPD1-201ENST00000300413 SPATA13Q96N96 652 aa8.53□□□□□ -1.04
SNRPD1-201ENST00000300413 STRA6Q9BX79 667 aa8.53□□□□□ -1.04
SNRPD1-201ENST00000300413 PHACTR1Q9C0D0 580 aa8.53□□□□□ -1.04
SNRPD1-201ENST00000300413 LRRC19Q9H756 370 aa8.53□□□□□ -1.04
SNRPD1-201ENST00000300413 DZANK1Q9NVP4 752 aa8.53□□□□□ -1.04
SNRPD1-201ENST00000300413 PCYOX1Q9UHG3 505 aa8.53□□□□□ -1.04
SNRPD1-201ENST00000300413 NCKAP1Q9Y2A7 1128 aa8.53□□□□□ -1.04
SNRPD1-201ENST00000300413 PIRO00625 290 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms