RNA–Protein interactions for RNA: ENST00000298260.8

SKA3-201, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 2,803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-201ENST00000298260 PRKG1Q13976 671 aa13.86□□□□□ -0.19
SKA3-201ENST00000298260 SPDYE2Q495Y8 402 aa13.86□□□□□ -0.19
SKA3-201ENST00000298260 CCDC92Q53HC0 331 aaPredicted RBP13.86□□□□□ -0.19
SKA3-201ENST00000298260 FAM219BQ5XKK7 198 aa13.86□□□□□ -0.19
SKA3-201ENST00000298260 TMEM214Q6NUQ4 689 aaKnown RBP13.86□□□□□ -0.19
SKA3-201ENST00000298260 SCARA5Q6ZMJ2 495 aa13.86□□□□□ -0.19
SKA3-201ENST00000298260 DSELQ8IZU8 1212 aa13.86□□□□□ -0.19
SKA3-201ENST00000298260 OR5B17Q8NGF7 314 aa13.86□□□□□ -0.19
SKA3-201ENST00000298260 MAML3Q96JK9 1138 aa13.86□□□□□ -0.19
SKA3-201ENST00000298260 CAMKK2Q96RR4 588 aa13.86□□□□□ -0.19
SKA3-201ENST00000298260 KCNK16Q96T55 309 aa13.86□□□□□ -0.19
SKA3-201ENST00000298260 CIB1Q99828 191 aa13.86□□□□□ -0.19
SKA3-201ENST00000298260 PCDHAC1Q9H158 963 aa13.86□□□□□ -0.19
SKA3-201ENST00000298260 PSAT1Q9Y617 370 aa13.86□□□□□ -0.19
SKA3-201ENST00000298260 TPP1O14773 563 aa13.86□□□□□ -0.19
SKA3-201ENST00000298260 KCNN4O15554 427 aa13.86□□□□□ -0.19
SKA3-201ENST00000298260 E2F6O75461 281 aa13.86□□□□□ -0.19
SKA3-201ENST00000298260 ZBTB7AO95365 584 aa13.86□□□□□ -0.19
SKA3-201ENST00000298260 GH2P01242 217 aa13.86□□□□□ -0.19
SKA3-201ENST00000298260 GNAO1P09471 354 aa13.86□□□□□ -0.19
SKA3-201ENST00000298260 CD151P48509 253 aa13.86□□□□□ -0.19
SKA3-201ENST00000298260 SP4Q02446 784 aa13.86□□□□□ -0.19
SKA3-201ENST00000298260 MGAT5BQ3V5L5 792 aa13.86□□□□□ -0.19
SKA3-201ENST00000298260 FGD3Q5JSP0 725 aa13.86□□□□□ -0.19
SKA3-201ENST00000298260 CENPSQ8N2Z9 138 aa13.86□□□□□ -0.19
SKA3-201ENST00000298260 WDTC1Q8N5D0 677 aa13.86□□□□□ -0.19
SKA3-201ENST00000298260 NETO2Q8NC67 525 aa13.86□□□□□ -0.19
SKA3-201ENST00000298260 LRTOMTQ8WZ04 291 aa13.86□□□□□ -0.19
SKA3-201ENST00000298260 ISOC1Q96CN7 298 aa13.86□□□□□ -0.19
SKA3-201ENST00000298260 TMA16Q96EY4 203 aaKnown RBP13.86□□□□□ -0.19
SKA3-201ENST00000298260 COX4I2Q96KJ9 171 aa13.86□□□□□ -0.19
SKA3-201ENST00000298260 SLC4A5Q9BY07 1137 aa13.86□□□□□ -0.19
SKA3-201ENST00000298260 SLC2A11Q9BYW1 496 aa13.86□□□□□ -0.19
SKA3-201ENST00000298260 OLAHQ9NV23 265 aa13.86□□□□□ -0.19
SKA3-201ENST00000298260 STK39Q9UEW8 545 aa13.86□□□□□ -0.19
SKA3-201ENST00000298260 TSC22D4Q9Y3Q8 395 aa13.86□□□□□ -0.19
SKA3-201ENST00000298260 ADAMTSL1Q8N6G6 1762 aa13.86□□□□□ -0.19
SKA3-201ENST00000298260 MCF2LO15068 1137 aa13.86□□□□□ -0.19
SKA3-201ENST00000298260 CLIC3O95833 236 aa13.86□□□□□ -0.19
SKA3-201ENST00000298260 ALDOAP04075 364 aaKnown RBP13.86□□□□□ -0.19
SKA3-201ENST00000298260 ARSAP15289 507 aa13.86□□□□□ -0.19
SKA3-201ENST00000298260 ZNF26P17031 533 aaPredicted RBP13.86□□□□□ -0.19
SKA3-201ENST00000298260 CRHR1P34998 444 aa13.86□□□□□ -0.19
SKA3-201ENST00000298260 GRM5P41594 1212 aa13.86□□□□□ -0.19
SKA3-201ENST00000298260 MAP7D1Q3KQU3 841 aa13.86□□□□□ -0.19
SKA3-201ENST00000298260 GPAT2Q6NUI2 795 aa13.86□□□□□ -0.19
SKA3-201ENST00000298260 BORAQ6PGQ7 559 aa13.86□□□□□ -0.19
SKA3-201ENST00000298260 DCDC5Q6ZRR9 648 aa13.86□□□□□ -0.19
SKA3-201ENST00000298260 BBS12Q6ZW61 710 aa13.86□□□□□ -0.19
SKA3-201ENST00000298260 ZNF677Q86XU0 584 aa13.86□□□□□ -0.19
SKA3-201ENST00000298260 CHERPQ8IWX8 916 aaKnown RBP13.86□□□□□ -0.19
SKA3-201ENST00000298260 GPD1LQ8N335 351 aa13.86□□□□□ -0.19
SKA3-201ENST00000298260 SNX31Q8N9S9 440 aa13.86□□□□□ -0.19
SKA3-201ENST00000298260 DEPTORQ8TB45 409 aa13.86□□□□□ -0.19
SKA3-201ENST00000298260 DEPDC1BQ8WUY9 529 aa13.86□□□□□ -0.19
SKA3-201ENST00000298260 DCPSQ96C86 337 aaKnown RBP13.86□□□□□ -0.19
SKA3-201ENST00000298260 PPP1R14BQ96C90 147 aa13.86□□□□□ -0.19
SKA3-201ENST00000298260 NLRP4Q96MN2 994 aa13.86□□□□□ -0.19
SKA3-201ENST00000298260 PLK2Q9NYY3 685 aa13.86□□□□□ -0.19
SKA3-201ENST00000298260 TMEM216Q9P0N5 145 aa13.86□□□□□ -0.19
SKA3-201ENST00000298260 RBBP6Q7Z6E9 1792 aaKnown RBP13.85□□□□□ -0.19
SKA3-201ENST00000298260 SLC15A5A6NIM6 579 aa13.85□□□□□ -0.19
SKA3-201ENST00000298260 A8MU76 341 aa13.85□□□□□ -0.19
SKA3-201ENST00000298260 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.85□□□□□ -0.19
SKA3-201ENST00000298260 KRT38O76015 456 aa13.85□□□□□ -0.19
SKA3-201ENST00000298260 APOEP02649 317 aa13.85□□□□□ -0.19
SKA3-201ENST00000298260 ALDH2P05091 517 aa13.85□□□□□ -0.19
SKA3-201ENST00000298260 CKMT2P17540 419 aa13.85□□□□□ -0.19
SKA3-201ENST00000298260 EIF2B2P49770 351 aaKnown RBP13.85□□□□□ -0.19
SKA3-201ENST00000298260 CYP2A13Q16696 494 aa13.85□□□□□ -0.19
SKA3-201ENST00000298260 BSPRYQ5W0U4 402 aa13.85□□□□□ -0.19
SKA3-201ENST00000298260 KRT80Q6KB66 452 aa13.85□□□□□ -0.19
SKA3-201ENST00000298260 B3GNT9Q6UX72 402 aa13.85□□□□□ -0.19
SKA3-201ENST00000298260 NAPRTQ6XQN6 538 aa13.85□□□□□ -0.19
SKA3-201ENST00000298260 CHST15Q7LFX5 561 aaPredicted RBP13.85□□□□□ -0.19
SKA3-201ENST00000298260 CMC1Q7Z7K0 106 aa13.85□□□□□ -0.19
SKA3-201ENST00000298260 TMEM110Q86TL2 294 aa13.85□□□□□ -0.19
SKA3-201ENST00000298260 UBR7Q8N806 425 aa13.85□□□□□ -0.19
SKA3-201ENST00000298260 TFAP2BQ92481 460 aa13.85□□□□□ -0.19
SKA3-201ENST00000298260 FBXO28Q9NVF7 368 aa13.85□□□□□ -0.19
SKA3-201ENST00000298260 TBCCD1Q9NVR7 557 aa13.85□□□□□ -0.19
SKA3-201ENST00000298260 CORINQ9Y5Q5 1042 aa13.85□□□□□ -0.19
SKA3-201ENST00000298260 PRKCGP05129 697 aa13.85□□□□□ -0.19
SKA3-201ENST00000298260 OSBPP22059 807 aa13.85□□□□□ -0.19
SKA3-201ENST00000298260 TMED10P49755 219 aaKnown RBP13.85□□□□□ -0.19
SKA3-201ENST00000298260 ROR1Q01973 937 aa13.85□□□□□ -0.19
SKA3-201ENST00000298260 ZNF423Q2M1K9 1284 aa13.85□□□□□ -0.19
SKA3-201ENST00000298260 CES3Q6UWW8 571 aa13.85□□□□□ -0.19
SKA3-201ENST00000298260 SH3BP5LQ7L8J4 393 aa13.85□□□□□ -0.19
SKA3-201ENST00000298260 MAP4K3Q8IVH8 894 aa13.85□□□□□ -0.19
SKA3-201ENST00000298260 TMEM102Q8N9M5 508 aaPredicted RBP13.85□□□□□ -0.19
SKA3-201ENST00000298260 THAP11Q96EK4 314 aa13.85□□□□□ -0.19
SKA3-201ENST00000298260 ACO2Q99798 780 aaKnown RBP13.85□□□□□ -0.19
SKA3-201ENST00000298260 GPATCH1Q9BRR8 931 aaKnown RBP13.85□□□□□ -0.19
SKA3-201ENST00000298260 GCOM2Q9BZD3 368 aaPredicted RBP13.85□□□□□ -0.19
SKA3-201ENST00000298260 CYP26B1Q9NR63 512 aa13.85□□□□□ -0.19
SKA3-201ENST00000298260 SACM1LQ9NTJ5 587 aa13.85□□□□□ -0.19
SKA3-201ENST00000298260 GPATCH2LQ9NWQ4 482 aa13.85□□□□□ -0.19
SKA3-201ENST00000298260 HES2Q9Y543 173 aa13.85□□□□□ -0.19
SKA3-201ENST00000298260 FOCADQ5VW36 1801 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms