RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 ARHGAP1Q07960 439 aa25.12■■□□□ 1.61
SPTSSA-201ENST00000298130 STILQ15468 1287 aa25.12■■□□□ 1.61
SPTSSA-201ENST00000298130 MAVSQ7Z434 540 aa25.12■■□□□ 1.61
SPTSSA-201ENST00000298130 MTBPQ96DY7 904 aa25.12■■□□□ 1.61
SPTSSA-201ENST00000298130 MAN1C1Q9NR34 630 aa25.12■■□□□ 1.61
SPTSSA-201ENST00000298130 LRCH1Q9Y2L9 728 aa25.12■■□□□ 1.61
SPTSSA-201ENST00000298130 FGF3P11487 239 aaPredicted RBP25.12■■□□□ 1.61
SPTSSA-201ENST00000298130 SKIP12755 728 aa25.12■■□□□ 1.61
SPTSSA-201ENST00000298130 PSMB4P28070 264 aa25.12■■□□□ 1.61
SPTSSA-201ENST00000298130 GRIK3Q13003 919 aa25.12■■□□□ 1.61
SPTSSA-201ENST00000298130 TTLL12Q14166 644 aaPredicted RBP25.12■■□□□ 1.61
SPTSSA-201ENST00000298130 TEDDM1Q5T9Z0 273 aa25.12■■□□□ 1.61
SPTSSA-201ENST00000298130 MBLAC2Q68D91 279 aa25.12■■□□□ 1.61
SPTSSA-201ENST00000298130 DPY19L2Q6NUT2 758 aa25.12■■□□□ 1.61
SPTSSA-201ENST00000298130 IZUMO2Q6UXV1 221 aa25.12■■□□□ 1.61
SPTSSA-201ENST00000298130 PACS1Q6VY07 963 aa25.12■■□□□ 1.61
SPTSSA-201ENST00000298130 NME8Q8N427 588 aa25.12■■□□□ 1.61
SPTSSA-201ENST00000298130 SPDYE1Q8NFV5 336 aaPredicted RBP25.12■■□□□ 1.61
SPTSSA-201ENST00000298130 PPP1R36Q96LQ0 422 aa25.12■■□□□ 1.61
SPTSSA-201ENST00000298130 CDHR5Q9HBB8 845 aa25.12■■□□□ 1.61
SPTSSA-201ENST00000298130 THAP1Q9NVV9 213 aa25.12■■□□□ 1.61
SPTSSA-201ENST00000298130 SYBUQ9NX95 663 aa25.12■■□□□ 1.61
SPTSSA-201ENST00000298130 TMEM216Q9P0N5 145 aa25.12■■□□□ 1.61
SPTSSA-201ENST00000298130 CCDC78A2IDD5 438 aa25.11■■□□□ 1.61
SPTSSA-201ENST00000298130 KCNK1O00180 336 aa25.11■■□□□ 1.61
SPTSSA-201ENST00000298130 SMIM24O75264 130 aa25.11■■□□□ 1.61
SPTSSA-201ENST00000298130 TM7SF2O76062 418 aa25.11■■□□□ 1.61
SPTSSA-201ENST00000298130 IL1BP01584 269 aa25.11■■□□□ 1.61
SPTSSA-201ENST00000298130 CYP2C8P10632 490 aa25.11■■□□□ 1.61
SPTSSA-201ENST00000298130 MAGEA6P43360 314 aa25.11■■□□□ 1.61
SPTSSA-201ENST00000298130 DPYSL2Q16555 572 aa25.11■■□□□ 1.61
SPTSSA-201ENST00000298130 ARMCX2Q7L311 632 aa25.11■■□□□ 1.61
SPTSSA-201ENST00000298130 MMADHCQ9H3L0 296 aaPredicted RBP25.11■■□□□ 1.61
SPTSSA-201ENST00000298130 C11orf97A0A1B0GVM6 126 aaPredicted RBP25.11■■□□□ 1.61
SPTSSA-201ENST00000298130 SDR42E2A6NKP2 422 aa25.11■■□□□ 1.61
SPTSSA-201ENST00000298130 CIB2O75838 187 aa25.11■■□□□ 1.61
SPTSSA-201ENST00000298130 ADCYAP1R1P41586 468 aa25.11■■□□□ 1.61
SPTSSA-201ENST00000298130 RAP1GDS1P52306 607 aa25.11■■□□□ 1.61
SPTSSA-201ENST00000298130 ARHGAP24Q8N264 748 aa25.11■■□□□ 1.61
SPTSSA-201ENST00000298130 TFB1MQ8WVM0 346 aaKnown RBP25.11■■□□□ 1.61
SPTSSA-201ENST00000298130 QKIQ96PU8 341 aaKnown RBP eCLIP25.11■■□□□ 1.618e-8■■□□□ 13.2
SPTSSA-201ENST00000298130 FRMD8Q9BZ67 464 aaPredicted RBP25.11■■□□□ 1.61
SPTSSA-201ENST00000298130 SLC2A14Q8TDB8 520 aa25.1■■□□□ 1.61
SPTSSA-201ENST00000298130 PGBD4Q96DM1 585 aa25.1■■□□□ 1.61
SPTSSA-201ENST00000298130 MPHOSPH6Q99547 160 aaKnown RBP25.1■■□□□ 1.61
SPTSSA-201ENST00000298130 C2CD2Q9Y426 696 aa25.1■■□□□ 1.61
SPTSSA-201ENST00000298130 CCNJLQ8IV13 435 aa25.1■■□□□ 1.61
SPTSSA-201ENST00000298130 PIWIL2Q8TC59 973 aaKnown RBP25.1■■□□□ 1.61
SPTSSA-201ENST00000298130 ARNTL2Q8WYA1 636 aa25.1■■□□□ 1.61
SPTSSA-201ENST00000298130 LRRC39Q96DD0 335 aa25.1■■□□□ 1.61
SPTSSA-201ENST00000298130 DNAJC25-GNG10A0A024R161 153 aa25.1■■□□□ 1.61
SPTSSA-201ENST00000298130 RNF103O00237 685 aa25.1■■□□□ 1.61
SPTSSA-201ENST00000298130 MAGEC1O60732 1142 aa25.1■■□□□ 1.61
SPTSSA-201ENST00000298130 DDNO94850 711 aaPredicted RBP25.1■■□□□ 1.61
SPTSSA-201ENST00000298130 SERPINA6P08185 405 aa25.1■■□□□ 1.61
SPTSSA-201ENST00000298130 NCF2P19878 526 aaPredicted RBP25.1■■□□□ 1.61
SPTSSA-201ENST00000298130 SLC26A2P50443 739 aa25.1■■□□□ 1.61
SPTSSA-201ENST00000298130 USP4Q13107 963 aa25.1■■□□□ 1.61
SPTSSA-201ENST00000298130 TUBB3Q13509 450 aa25.1■■□□□ 1.61
SPTSSA-201ENST00000298130 PCLAFQ15004 111 aa25.1■■□□□ 1.61
SPTSSA-201ENST00000298130 FAM187BQ17R55 369 aa25.1■■□□□ 1.61
SPTSSA-201ENST00000298130 MTHFD1LQ6UB35 978 aa25.1■■□□□ 1.61
SPTSSA-201ENST00000298130 ADAM32Q8TC27 787 aa25.1■■□□□ 1.61
SPTSSA-201ENST00000298130 P2RY11Q96G91 374 aa25.1■■□□□ 1.61
SPTSSA-201ENST00000298130 ZNF184Q99676 751 aaPredicted RBP25.1■■□□□ 1.61
SPTSSA-201ENST00000298130 TPSB2P20231 275 aa25.09■■□□□ 1.61
SPTSSA-201ENST00000298130 NME3Q13232 169 aa25.09■■□□□ 1.61
SPTSSA-201ENST00000298130 SEMA5AQ13591 1074 aa25.09■■□□□ 1.61
SPTSSA-201ENST00000298130 ITGA9Q13797 1035 aa25.09■■□□□ 1.61
SPTSSA-201ENST00000298130 TPSAB1Q15661 275 aa25.09■■□□□ 1.61
SPTSSA-201ENST00000298130 DLG2Q15700 870 aa25.09■■□□□ 1.61
SPTSSA-201ENST00000298130 WDR75Q8IWA0 830 aaKnown RBP25.09■■□□□ 1.61
SPTSSA-201ENST00000298130 DEFB106AQ8N104 65 aa25.09■■□□□ 1.61
SPTSSA-201ENST00000298130 ZNF483Q8TF39 744 aaPredicted RBP25.09■■□□□ 1.61
SPTSSA-201ENST00000298130 NXF3Q9H4D5 531 aaKnown RBP25.09■■□□□ 1.61
SPTSSA-201ENST00000298130 CAB39LQ9H9S4 337 aa25.09■■□□□ 1.61
SPTSSA-201ENST00000298130 KIAA1257Q9ULG3 409 aa25.09■■□□□ 1.61
SPTSSA-201ENST00000298130 WDR90Q96KV7 1748 aa25.09■■□□□ 1.61
SPTSSA-201ENST00000298130 CLDN5O00501 218 aa25.09■■□□□ 1.61
SPTSSA-201ENST00000298130 PRKCGP05129 697 aa25.09■■□□□ 1.61
SPTSSA-201ENST00000298130 DCAF6Q58WW2 860 aa25.09■■□□□ 1.61
SPTSSA-201ENST00000298130 CTU1Q7Z7A3 348 aaKnown RBP25.09■■□□□ 1.61
SPTSSA-201ENST00000298130 A0A088AWK7 358 aa25.08■■□□□ 1.61
SPTSSA-201ENST00000298130 A0A0G2JLL6 359 aaPredicted RBP25.08■■□□□ 1.61
SPTSSA-201ENST00000298130 GOLGA8TH3BQL2 631 aa25.08■■□□□ 1.61
SPTSSA-201ENST00000298130 SPTLC1O15269 473 aa25.08■■□□□ 1.61
SPTSSA-201ENST00000298130 PLIN3O60664 434 aa25.08■■□□□ 1.61
SPTSSA-201ENST00000298130 ITGA2BP08514 1039 aa25.08■■□□□ 1.61
SPTSSA-201ENST00000298130 NDUFV1P49821 464 aa25.08■■□□□ 1.61
SPTSSA-201ENST00000298130 ZNF484Q5JVG2 852 aa25.08■■□□□ 1.61
SPTSSA-201ENST00000298130 IRGCQ6NXR0 463 aa25.08■■□□□ 1.61
SPTSSA-201ENST00000298130 RAPH1Q70E73 1250 aa25.08■■□□□ 1.61
SPTSSA-201ENST00000298130 PRRT2Q7Z6L0 340 aaPredicted RBP25.08■■□□□ 1.61
SPTSSA-201ENST00000298130 PLD6Q8N2A8 252 aaKnown RBP25.08■■□□□ 1.61
SPTSSA-201ENST00000298130 APOL2Q9BQE5 337 aa25.08■■□□□ 1.61
SPTSSA-201ENST00000298130 NFKBIZQ9BYH8 718 aa25.08■■□□□ 1.61
SPTSSA-201ENST00000298130 G3BP2Q9UN86 482 aaKnown RBP25.08■■□□□ 1.61
SPTSSA-201ENST00000298130 MRPL42Q9Y6G3 142 aaKnown RBP25.08■■□□□ 1.61
SPTSSA-201ENST00000298130 A0A0A0MRY4 1105 aa25.08■■□□□ 1.61
SPTSSA-201ENST00000298130 PROCP04070 461 aa25.08■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms