RNA–Protein interactions for RNA: ENST00000297933.10

GAPVD1-202, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GAPVD1, Length 6,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-202ENST00000297933 TAF6LQ9Y6J9 622 aa7.09□□□□□ -1.27
GAPVD1-202ENST00000297933 C16orf96A6NNT2 1141 aa7.09□□□□□ -1.27
GAPVD1-202ENST00000297933 PFDN1O60925 122 aa7.09□□□□□ -1.27
GAPVD1-202ENST00000297933 ASGR1P07306 291 aa7.09□□□□□ -1.27
GAPVD1-202ENST00000297933 PPP2R1BP30154 601 aa7.09□□□□□ -1.27
GAPVD1-202ENST00000297933 GLUD2P49448 558 aa7.09□□□□□ -1.27
GAPVD1-202ENST00000297933 C1QBPQ07021 282 aaKnown RBP7.09□□□□□ -1.27
GAPVD1-202ENST00000297933 KBTBD12Q3ZCT8 623 aa7.09□□□□□ -1.27
GAPVD1-202ENST00000297933 RAP1GAP2Q684P5 730 aa7.09□□□□□ -1.27
GAPVD1-202ENST00000297933 KIAA0319LQ8IZA0 1049 aa7.09□□□□□ -1.27
GAPVD1-202ENST00000297933 CYGBQ8WWM9 190 aa7.09□□□□□ -1.27
GAPVD1-202ENST00000297933 ANKS1AQ92625 1134 aa7.09□□□□□ -1.27
GAPVD1-202ENST00000297933 GLMNQ92990 594 aa7.09□□□□□ -1.27
GAPVD1-202ENST00000297933 BBS4Q96RK4 519 aa7.09□□□□□ -1.27
GAPVD1-202ENST00000297933 BBS2Q9BXC9 721 aa7.09□□□□□ -1.27
GAPVD1-202ENST00000297933 RGS18Q9NS28 235 aa7.09□□□□□ -1.27
GAPVD1-202ENST00000297933 LRRC4BQ9NT99 713 aa7.09□□□□□ -1.27
GAPVD1-202ENST00000297933 KLHL28Q9NXS3 571 aa7.09□□□□□ -1.27
GAPVD1-202ENST00000297933 MPP6Q9NZW5 540 aa7.09□□□□□ -1.27
GAPVD1-202ENST00000297933 CCDC189A1A4V9 331 aa7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 USP27XA6NNY8 438 aa7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 SMIM22K7EJ46 135 aa7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 ZBTB14O43829 449 aa7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 HS6ST1O60243 411 aa7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 PROSCO94903 275 aa7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 GZMAP12544 262 aa7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 ATP6V1C1P21283 382 aa7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 PEX19P40855 299 aa7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 CDH17Q12864 832 aa7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 DEPDC1Q5TB30 811 aa7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 ZNF697Q5TEC3 545 aa7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 PPP2R2DQ66LE6 453 aa7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 C16orf87Q6PH81 154 aa7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 C15orf52Q6ZUT6 534 aaKnown RBP7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 CDK20Q8IZL9 346 aa7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 CYP4X1Q8N118 509 aa7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 MIER2Q8N344 545 aa7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 NLGN2Q8NFZ4 835 aa7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 RIPOR3Q96MK2 946 aa7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 POLR1EQ9GZS1 481 aaKnown RBP7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 KRT84Q9NSB2 600 aa7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 RBM12Q9NTZ6 932 aaKnown RBP7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 SYBUQ9NX95 663 aa7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 STK39Q9UEW8 545 aa7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 TRHDEQ9UKU6 1024 aa7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 TNFSF13BQ9Y275 285 aa7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 MTO1Q9Y2Z2 717 aaKnown RBP7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 PXDNQ92626 1479 aa7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 ZNF541Q9H0D2 1346 aa7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 ERI2A8K979 691 aaKnown RBP7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 NT5C1B-RDH14C9J2C7 533 aa7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 CA12O43570 354 aa7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 TPBGLP0DKB5 382 aa7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 MCL1Q07820 350 aa7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 KCNA10Q16322 511 aa7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 VSIG10LQ86VR7 867 aa7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 HJURPQ8NCD3 748 aaPredicted RBP7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 ANKRD49Q8WVL7 239 aa7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 ARNTL2Q8WYA1 636 aa7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 KLRG1Q96E93 195 aa7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 MCCC1Q96RQ3 725 aaPredicted RBP7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 SEMA6BQ9H3T3 888 aa7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 RPRD1BQ9NQG5 326 aaKnown RBP7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 ARL2BPQ9Y2Y0 163 aa7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 SCAMP3O14828 347 aaKnown RBP7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 CCL16O15467 120 aa7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 KRT6AP02538 564 aa7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 KRT6BP04259 564 aa7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 PLEKP08567 350 aaPredicted RBP7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 CYP3A4P08684 503 aa7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 CCDC159P0C7I6 412 aa7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 KRT6CP48668 564 aa7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 POLE2P56282 527 aa7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 ACTN3Q08043 901 aaPredicted RBP7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 ILF2Q12905 390 aaKnown RBP7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 ZNF544Q6NX49 715 aa7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 POTEAQ6S8J7 498 aa7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 ZNF606Q8WXB4 792 aa7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 OR8D1Q8WZ84 308 aa7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 MYLPFQ96A32 169 aa7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 MRPL48Q96GC5 212 aaKnown RBP7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 TBCBQ99426 244 aa7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 ZC4H2Q9NQZ6 224 aa7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 TUBGCP4Q9UGJ1 667 aa7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 FAM153AQ9UHL3 310 aa7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 ZMYND8Q9ULU4 1186 aaPredicted RBP7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 MRPS17Q9Y2R5 130 aaKnown RBP7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 SNTNA6NMZ2 147 aa7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 F8VZ95 297 aa7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 IGF2BP3O00425 579 aaKnown RBP eCLIP7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 GYPCP04921 128 aa7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 IFNA16P05015 189 aa7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 AMPD1P23109 780 aa7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 GABRR2P28476 465 aa7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 GYS2P54840 703 aa7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 SPRYD7Q5W111 196 aa7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 SLC22A9Q8IVM8 553 aa7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 ATG4AQ8WYN0 398 aa7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 SMG7Q92540 1137 aaKnown RBP7.08□□□□□ -1.28
GAPVD1-202ENST00000297933 CEP41Q9BYV8 373 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms