RNA–Protein interactions for RNA: ENST00000297784.9

TMC1-201, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMC1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-201ENST00000297784 RHOT2Q8IXI1 618 aa6.88□□□□□ -1.31
TMC1-201ENST00000297784 TTC39CQ8N584 583 aa6.88□□□□□ -1.31
TMC1-201ENST00000297784 UBL4BQ8N7F7 174 aa6.88□□□□□ -1.31
TMC1-201ENST00000297784 TMEM35BQ8NCS4 154 aa6.88□□□□□ -1.31
TMC1-201ENST00000297784 ZNF564Q8TBZ8 553 aaPredicted RBP6.88□□□□□ -1.31
TMC1-201ENST00000297784 SLC2A14Q8TDB8 520 aa6.88□□□□□ -1.31
TMC1-201ENST00000297784 DDX27Q96GQ7 796 aaKnown RBP6.88□□□□□ -1.31
TMC1-201ENST00000297784 SUSD3Q96L08 255 aa6.88□□□□□ -1.31
TMC1-201ENST00000297784 UROC1Q96N76 676 aa6.88□□□□□ -1.31
TMC1-201ENST00000297784 MIPEPQ99797 713 aa6.88□□□□□ -1.31
TMC1-201ENST00000297784 CADM1Q9BY67 442 aaKnown RBP6.88□□□□□ -1.31
TMC1-201ENST00000297784 GPR62Q9BZJ7 368 aa6.88□□□□□ -1.31
TMC1-201ENST00000297784 CWH43Q9H720 699 aa6.88□□□□□ -1.31
TMC1-201ENST00000297784 AVENQ9NQS1 362 aaPredicted RBP6.88□□□□□ -1.31
TMC1-201ENST00000297784 NDUFA13Q9P0J0 144 aa6.88□□□□□ -1.31
TMC1-201ENST00000297784 PRUNE2Q8WUY3 3088 aa6.88□□□□□ -1.31
TMC1-201ENST00000297784 TMEM189-UBE2V1I3L0A0 370 aa6.88□□□□□ -1.31
TMC1-201ENST00000297784 CAPN9O14815 690 aa6.88□□□□□ -1.31
TMC1-201ENST00000297784 TP73O15350 636 aa6.88□□□□□ -1.31
TMC1-201ENST00000297784 FAM200BP0CF97 657 aa6.88□□□□□ -1.31
TMC1-201ENST00000297784 ITIH2P19823 946 aa6.88□□□□□ -1.31
TMC1-201ENST00000297784 CD151P48509 253 aa6.88□□□□□ -1.31
TMC1-201ENST00000297784 INHBCP55103 352 aa6.88□□□□□ -1.31
TMC1-201ENST00000297784 SULT2A1Q06520 285 aa6.88□□□□□ -1.31
TMC1-201ENST00000297784 IKBKEQ14164 716 aa6.88□□□□□ -1.31
TMC1-201ENST00000297784 PDK4Q16654 411 aa6.88□□□□□ -1.31
TMC1-201ENST00000297784 GOLGA7BQ2TAP0 167 aa6.88□□□□□ -1.31
TMC1-201ENST00000297784 ACSBG2Q5FVE4 666 aa6.88□□□□□ -1.31
TMC1-201ENST00000297784 FAM171BQ6P995 826 aa6.88□□□□□ -1.31
TMC1-201ENST00000297784 SYDE1Q6ZW31 735 aaPredicted RBP6.88□□□□□ -1.31
TMC1-201ENST00000297784 TAS1R1Q7RTX1 841 aa6.88□□□□□ -1.31
TMC1-201ENST00000297784 TMEM86AQ8N2M4 240 aa6.88□□□□□ -1.31
TMC1-201ENST00000297784 ARFGAP1Q8N6T3 406 aa6.88□□□□□ -1.31
TMC1-201ENST00000297784 PCED1BQ96HM7 432 aa6.88□□□□□ -1.31
TMC1-201ENST00000297784 B3GALT6Q96L58 329 aa6.88□□□□□ -1.31
TMC1-201ENST00000297784 BTBD10Q9BSF8 475 aa6.88□□□□□ -1.31
TMC1-201ENST00000297784 B3GNT5Q9BYG0 378 aa6.88□□□□□ -1.31
TMC1-201ENST00000297784 RHOBTB2Q9BYZ6 727 aa6.88□□□□□ -1.31
TMC1-201ENST00000297784 PRDM5Q9NQX1 630 aaPredicted RBP6.88□□□□□ -1.31
TMC1-201ENST00000297784 KRT82Q9NSB4 513 aa6.88□□□□□ -1.31
TMC1-201ENST00000297784 KANSL3Q9P2N6 904 aa6.88□□□□□ -1.31
TMC1-201ENST00000297784 COL4A4P53420 1690 aaPredicted RBP6.88□□□□□ -1.31
TMC1-201ENST00000297784 GREB1Q4ZG55 1949 aa6.88□□□□□ -1.31
TMC1-201ENST00000297784 TMEM191CA6NGB0 347 aa6.88□□□□□ -1.31
TMC1-201ENST00000297784 NT5C1B-RDH14C9J2C7 533 aa6.88□□□□□ -1.31
TMC1-201ENST00000297784 TBX10O75333 385 aa6.88□□□□□ -1.31
TMC1-201ENST00000297784 ASLP04424 464 aa6.88□□□□□ -1.31
TMC1-201ENST00000297784 TCF4P15884 667 aa6.88□□□□□ -1.31
TMC1-201ENST00000297784 COMTP21964 271 aa6.88□□□□□ -1.31
TMC1-201ENST00000297784 OR1G1P47890 313 aa6.88□□□□□ -1.31
TMC1-201ENST00000297784 MARCKSL1P49006 195 aa6.88□□□□□ -1.31
TMC1-201ENST00000297784 SLC11A1P49279 550 aa6.88□□□□□ -1.31
TMC1-201ENST00000297784 SCNN1BP51168 640 aa6.88□□□□□ -1.31
TMC1-201ENST00000297784 DEUP1Q05D60 604 aa6.88□□□□□ -1.31
TMC1-201ENST00000297784 CALCOCO2Q13137 446 aa6.88□□□□□ -1.31
TMC1-201ENST00000297784 STAT4Q14765 748 aa6.88□□□□□ -1.31
TMC1-201ENST00000297784 TAF5Q15542 800 aa6.88□□□□□ -1.31
TMC1-201ENST00000297784 KCTD19Q17RG1 926 aaPredicted RBP6.88□□□□□ -1.31
TMC1-201ENST00000297784 MARK2Q7KZI7 788 aaKnown RBP6.88□□□□□ -1.31
TMC1-201ENST00000297784 TMEM110Q86TL2 294 aa6.88□□□□□ -1.31
TMC1-201ENST00000297784 NPAS4Q8IUM7 802 aa6.88□□□□□ -1.31
TMC1-201ENST00000297784 SCUBE3Q8IX30 993 aa6.88□□□□□ -1.31
TMC1-201ENST00000297784 ZDHHC14Q8IZN3 488 aa6.88□□□□□ -1.31
TMC1-201ENST00000297784 ANKRD52Q8NB46 1076 aa6.88□□□□□ -1.31
TMC1-201ENST00000297784 CLEC4CQ8WTT0 213 aa6.88□□□□□ -1.31
TMC1-201ENST00000297784 PTCD3Q96EY7 689 aaKnown RBP6.88□□□□□ -1.31
TMC1-201ENST00000297784 KCNK16Q96T55 309 aa6.88□□□□□ -1.31
TMC1-201ENST00000297784 HNRNPABQ99729 332 aaKnown RBP6.88□□□□□ -1.31
TMC1-201ENST00000297784 VN1R3Q9BXE9 311 aa6.88□□□□□ -1.31
TMC1-201ENST00000297784 SLC4A5Q9BY07 1137 aa6.88□□□□□ -1.31
TMC1-201ENST00000297784 SNX25Q9H3E2 840 aa6.88□□□□□ -1.31
TMC1-201ENST00000297784 LRRC19Q9H756 370 aa6.88□□□□□ -1.31
TMC1-201ENST00000297784 MLXIPLQ9NP71 852 aa6.88□□□□□ -1.31
TMC1-201ENST00000297784 UVRAGQ9P2Y5 699 aa6.88□□□□□ -1.31
TMC1-201ENST00000297784 ZFP69BQ9UJL9 534 aa6.88□□□□□ -1.31
TMC1-201ENST00000297784 ANGPTL2Q9UKU9 493 aa6.88□□□□□ -1.31
TMC1-201ENST00000297784 SMIM31A0A1B0GVY4 71 aa6.87□□□□□ -1.31
TMC1-201ENST00000297784 E5RJQ4 531 aa6.87□□□□□ -1.31
TMC1-201ENST00000297784 F8W8V4 182 aa6.87□□□□□ -1.31
TMC1-201ENST00000297784 GSC2O15499 205 aa6.87□□□□□ -1.31
TMC1-201ENST00000297784 KRT36O76013 467 aa6.87□□□□□ -1.31
TMC1-201ENST00000297784 CBX6O95503 412 aa6.87□□□□□ -1.31
TMC1-201ENST00000297784 GALTP07902 379 aa6.87□□□□□ -1.31
TMC1-201ENST00000297784 ABHD2P08910 425 aa6.87□□□□□ -1.31
TMC1-201ENST00000297784 LINC00271P0C7V0 271 aa6.87□□□□□ -1.31
TMC1-201ENST00000297784 RFC2P35250 354 aa6.87□□□□□ -1.31
TMC1-201ENST00000297784 RFC1P35251 1148 aaPredicted RBP6.87□□□□□ -1.31
TMC1-201ENST00000297784 LHX1P48742 406 aa6.87□□□□□ -1.31
TMC1-201ENST00000297784 WDR5P61964 334 aaKnown RBP6.87□□□□□ -1.31
TMC1-201ENST00000297784 ZNF211Q13398 564 aaPredicted RBP6.87□□□□□ -1.31
TMC1-201ENST00000297784 ITGA9Q13797 1035 aa6.87□□□□□ -1.31
TMC1-201ENST00000297784 MRPL58Q14197 206 aaKnown RBP6.87□□□□□ -1.31
TMC1-201ENST00000297784 SPARCL1Q14515 664 aa6.87□□□□□ -1.31
TMC1-201ENST00000297784 SIX1Q15475 284 aaPredicted RBP6.87□□□□□ -1.31
TMC1-201ENST00000297784 RFWD3Q6PCD5 774 aa6.87□□□□□ -1.31
TMC1-201ENST00000297784 RSPO2Q6UXX9 243 aaPredicted RBP6.87□□□□□ -1.31
TMC1-201ENST00000297784 DSTYKQ6XUX3 929 aa6.87□□□□□ -1.31
TMC1-201ENST00000297784 CLEC20AQ6ZU45 233 aa6.87□□□□□ -1.31
TMC1-201ENST00000297784 CYP4X1Q8N118 509 aa6.87□□□□□ -1.31
TMC1-201ENST00000297784 LRRC43Q8N309 656 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms