RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 SGF29Q96ES7 293 aa9.59□□□□□ -0.87
PRDM9-201ENST00000296682 SLC4A5Q9BY07 1137 aa9.59□□□□□ -0.87
PRDM9-201ENST00000296682 DUSP16Q9BY84 665 aa9.59□□□□□ -0.87
PRDM9-201ENST00000296682 ACTR5Q9H9F9 607 aaPredicted RBP9.59□□□□□ -0.87
PRDM9-201ENST00000296682 HEY2Q9UBP5 337 aa9.59□□□□□ -0.87
PRDM9-201ENST00000296682 ZFP69BQ9UJL9 534 aa9.59□□□□□ -0.87
PRDM9-201ENST00000296682 TRPM7Q96QT4 1865 aa9.59□□□□□ -0.87
PRDM9-201ENST00000296682 MYO9BQ13459 2157 aa9.58□□□□□ -0.88
PRDM9-201ENST00000296682 KRT38O76015 456 aa9.58□□□□□ -0.88
PRDM9-201ENST00000296682 SNRPAP09012 282 aaKnown RBP9.58□□□□□ -0.88
PRDM9-201ENST00000296682 GLRBP48167 497 aa9.58□□□□□ -0.88
PRDM9-201ENST00000296682 PURAQ00577 322 aaKnown RBP9.58□□□□□ -0.88
PRDM9-201ENST00000296682 NR1H3Q13133 447 aa9.58□□□□□ -0.88
PRDM9-201ENST00000296682 LACTB2Q53H82 288 aaPredicted RBP9.58□□□□□ -0.88
PRDM9-201ENST00000296682 CLEC20AQ6ZU45 233 aa9.58□□□□□ -0.88
PRDM9-201ENST00000296682 UNC93AQ86WB7 457 aa9.58□□□□□ -0.88
PRDM9-201ENST00000296682 SPATA2LQ8IUW3 424 aaPredicted RBP9.58□□□□□ -0.88
PRDM9-201ENST00000296682 SPNS2Q8IVW8 549 aa9.58□□□□□ -0.88
PRDM9-201ENST00000296682 C3orf58Q8NDZ4 430 aa9.58□□□□□ -0.88
PRDM9-201ENST00000296682 HIPK4Q8NE63 616 aa9.58□□□□□ -0.88
PRDM9-201ENST00000296682 CCT6BQ92526 530 aa9.58□□□□□ -0.88
PRDM9-201ENST00000296682 MCUR1Q96AQ8 359 aa9.58□□□□□ -0.88
PRDM9-201ENST00000296682 PABPC5Q96DU9 382 aaKnown RBP9.58□□□□□ -0.88
PRDM9-201ENST00000296682 SRPK1Q96SB4 655 aaKnown RBP9.58□□□□□ -0.88
PRDM9-201ENST00000296682 MTG1Q9BT17 334 aaPredicted RBP9.58□□□□□ -0.88
PRDM9-201ENST00000296682 TRIM55Q9BYV6 548 aa9.58□□□□□ -0.88
PRDM9-201ENST00000296682 ACSS3Q9H6R3 686 aa9.58□□□□□ -0.88
PRDM9-201ENST00000296682 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.58□□□□□ -0.88
PRDM9-201ENST00000296682 MPP6Q9NZW5 540 aa9.58□□□□□ -0.88
PRDM9-201ENST00000296682 OR12D3Q9UGF7 316 aa9.58□□□□□ -0.88
PRDM9-201ENST00000296682 LGALS13Q9UHV8 139 aa9.58□□□□□ -0.88
PRDM9-201ENST00000296682 SMG5Q9UPR3 1016 aaKnown RBP9.58□□□□□ -0.88
PRDM9-201ENST00000296682 GNEQ9Y223 722 aaKnown RBP9.58□□□□□ -0.88
PRDM9-201ENST00000296682 SLC27A5Q9Y2P5 690 aa9.58□□□□□ -0.88
PRDM9-201ENST00000296682 FSBPO95073 299 aa9.58□□□□□ -0.88
PRDM9-201ENST00000296682 OAS1P00973 400 aaKnown RBP9.58□□□□□ -0.88
PRDM9-201ENST00000296682 SETSIPP0DME0 302 aa9.58□□□□□ -0.88
PRDM9-201ENST00000296682 ALDH18A1P54886 795 aaKnown RBP9.58□□□□□ -0.88
PRDM9-201ENST00000296682 RPL10AP62906 217 aaKnown RBP9.58□□□□□ -0.88
PRDM9-201ENST00000296682 TAF1BQ53T94 588 aaPredicted RBP9.58□□□□□ -0.88
PRDM9-201ENST00000296682 HSP90AA5PQ58FG0 334 aa9.58□□□□□ -0.88
PRDM9-201ENST00000296682 SLC45A4Q5BKX6 768 aa9.58□□□□□ -0.88
PRDM9-201ENST00000296682 PPM1JQ5JR12 505 aa9.58□□□□□ -0.88
PRDM9-201ENST00000296682 SPOUT1Q5T280 376 aaKnown RBP9.58□□□□□ -0.88
PRDM9-201ENST00000296682 OVOS1Q6IE37 1185 aa9.58□□□□□ -0.88
PRDM9-201ENST00000296682 ECHDC2Q86YB7 292 aa9.58□□□□□ -0.88
PRDM9-201ENST00000296682 MYLPFQ96A32 169 aa9.58□□□□□ -0.88
PRDM9-201ENST00000296682 MOCOSQ96EN8 888 aa9.58□□□□□ -0.88
PRDM9-201ENST00000296682 FOXP3Q9BZS1 431 aa9.58□□□□□ -0.88
PRDM9-201ENST00000296682 MYLK2Q9H1R3 596 aa9.58□□□□□ -0.88
PRDM9-201ENST00000296682 USP29Q9HBJ7 922 aa9.58□□□□□ -0.88
PRDM9-201ENST00000296682 POPDC2Q9HBU9 364 aa9.58□□□□□ -0.88
PRDM9-201ENST00000296682 CRTAC1Q9NQ79 661 aa9.58□□□□□ -0.88
PRDM9-201ENST00000296682 ARHGEF4Q9NR80 690 aa9.58□□□□□ -0.88
PRDM9-201ENST00000296682 FBXO6Q9NRD1 293 aaPredicted RBP9.58□□□□□ -0.88
PRDM9-201ENST00000296682 COL1A2P08123 1366 aa9.58□□□□□ -0.88
PRDM9-201ENST00000296682 FAM237BA0A1B0GVD1 139 aa9.58□□□□□ -0.88
PRDM9-201ENST00000296682 MANSC4A6NHS7 340 aaPredicted RBP9.58□□□□□ -0.88
PRDM9-201ENST00000296682 TADA2AO75478 443 aa9.58□□□□□ -0.88
PRDM9-201ENST00000296682 LTFP02788 710 aa9.58□□□□□ -0.88
PRDM9-201ENST00000296682 ITGB1P05556 798 aa9.58□□□□□ -0.88
PRDM9-201ENST00000296682 CCND3P30281 292 aaPredicted RBP9.58□□□□□ -0.88
PRDM9-201ENST00000296682 POU6F1Q14863 301 aa9.58□□□□□ -0.88
PRDM9-201ENST00000296682 TRIM68Q6AZZ1 485 aa9.58□□□□□ -0.88
PRDM9-201ENST00000296682 UNC5AQ6ZN44 842 aa9.58□□□□□ -0.88
PRDM9-201ENST00000296682 OTOAQ7RTW8 1153 aa9.58□□□□□ -0.88
PRDM9-201ENST00000296682 FAM35AQ86V20 835 aa9.58□□□□□ -0.88
PRDM9-201ENST00000296682 SLC26A11Q86WA9 606 aa9.58□□□□□ -0.88
PRDM9-201ENST00000296682 RASSF3Q86WH2 238 aa9.58□□□□□ -0.88
PRDM9-201ENST00000296682 NT5DC4Q86YG4 428 aa9.58□□□□□ -0.88
PRDM9-201ENST00000296682 SPATA6LQ8N4H0 392 aa9.58□□□□□ -0.88
PRDM9-201ENST00000296682 RFWD2Q8NHY2 731 aa9.58□□□□□ -0.88
PRDM9-201ENST00000296682 SEPT5Q99719 369 aaPredicted RBP9.58□□□□□ -0.88
PRDM9-201ENST00000296682 TRPV6Q9H1D0 765 aa9.58□□□□□ -0.88
PRDM9-201ENST00000296682 FETUBQ9UGM5 382 aa9.58□□□□□ -0.88
PRDM9-201ENST00000296682 GTF2IRD1Q9UHL9 959 aa9.58□□□□□ -0.88
PRDM9-201ENST00000296682 GRID1Q9ULK0 1009 aa9.58□□□□□ -0.88
PRDM9-201ENST00000296682 PIRO00625 290 aa9.57□□□□□ -0.88
PRDM9-201ENST00000296682 TSPY1Q01534 308 aa9.57□□□□□ -0.88
PRDM9-201ENST00000296682 IRF5Q13568 498 aa9.57□□□□□ -0.88
PRDM9-201ENST00000296682 ACAP1Q15027 740 aa9.57□□□□□ -0.88
PRDM9-201ENST00000296682 TAF12Q16514 161 aa9.57□□□□□ -0.88
PRDM9-201ENST00000296682 SLC39A12Q504Y0 691 aa9.57□□□□□ -0.88
PRDM9-201ENST00000296682 CFAP157Q5JU67 520 aa9.57□□□□□ -0.88
PRDM9-201ENST00000296682 UBXN11Q5T124 520 aa9.57□□□□□ -0.88
PRDM9-201ENST00000296682 TAF2Q6P1X5 1199 aa9.57□□□□□ -0.88
PRDM9-201ENST00000296682 NLRP9Q7RTR0 991 aa9.57□□□□□ -0.88
PRDM9-201ENST00000296682 CMC1Q7Z7K0 106 aa9.57□□□□□ -0.88
PRDM9-201ENST00000296682 IFNL1Q8IU54 200 aa9.57□□□□□ -0.88
PRDM9-201ENST00000296682 RAET1EQ8TD07 263 aa9.57□□□□□ -0.88
PRDM9-201ENST00000296682 TRIB2Q92519 343 aa9.57□□□□□ -0.88
PRDM9-201ENST00000296682 TMEM51Q9NW97 253 aa9.57□□□□□ -0.88
PRDM9-201ENST00000296682 BFARQ9NZS9 450 aa9.57□□□□□ -0.88
PRDM9-201ENST00000296682 TRPV2Q9Y5S1 764 aa9.57□□□□□ -0.88
PRDM9-201ENST00000296682 LAMA3Q16787 3333 aa9.57□□□□□ -0.88
PRDM9-201ENST00000296682 KIAA0100Q14667 2235 aaKnown RBP9.57□□□□□ -0.88
PRDM9-201ENST00000296682 NUP205Q92621 2012 aa9.57□□□□□ -0.88
PRDM9-201ENST00000296682 TTC24A2A3L6 582 aaPredicted RBP9.57□□□□□ -0.88
PRDM9-201ENST00000296682 C9IYK1 514 aa9.57□□□□□ -0.88
PRDM9-201ENST00000296682 BUD23O43709 281 aaKnown RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms