RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 IGLV3-27P01718 113 aa12.55□□□□□ -0.4
HMGB2-201ENST00000296503 TIE1P35590 1138 aa12.55□□□□□ -0.4
HMGB2-201ENST00000296503 NSFP46459 744 aaKnown RBP12.55□□□□□ -0.4
HMGB2-201ENST00000296503 DGKGP49619 791 aa12.55□□□□□ -0.4
HMGB2-201ENST00000296503 GPS2Q13227 327 aa12.55□□□□□ -0.4
HMGB2-201ENST00000296503 NME3Q13232 169 aa12.55□□□□□ -0.4
HMGB2-201ENST00000296503 EMC10Q5UCC4 262 aa12.55□□□□□ -0.4
HMGB2-201ENST00000296503 FYB2Q5VWT5 728 aa12.55□□□□□ -0.4
HMGB2-201ENST00000296503 MMS22LQ6ZRQ5 1243 aa12.55□□□□□ -0.4
HMGB2-201ENST00000296503 SFTPA1Q8IWL2 248 aa12.55□□□□□ -0.4
HMGB2-201ENST00000296503 SLC39A13Q96H72 371 aa12.55□□□□□ -0.4
HMGB2-201ENST00000296503 FCRL2Q96LA5 508 aaPredicted RBP12.55□□□□□ -0.4
HMGB2-201ENST00000296503 C11orf70Q9BRQ4 267 aa12.55□□□□□ -0.4
HMGB2-201ENST00000296503 ADAM22Q9P0K1 906 aa12.55□□□□□ -0.4
HMGB2-201ENST00000296503 WDFY4Q6ZS81 3184 aa12.54□□□□□ -0.4
HMGB2-201ENST00000296503 USP27XA6NNY8 438 aa12.54□□□□□ -0.4
HMGB2-201ENST00000296503 CHURC1-FNTBB4DL54 471 aa12.54□□□□□ -0.4
HMGB2-201ENST00000296503 M0QYT0 321 aa12.54□□□□□ -0.4
HMGB2-201ENST00000296503 PENKP01210 267 aaPredicted RBP12.54□□□□□ -0.4
HMGB2-201ENST00000296503 UNGP13051 313 aaPredicted RBP12.54□□□□□ -0.4
HMGB2-201ENST00000296503 MMP8P22894 467 aa12.54□□□□□ -0.4
HMGB2-201ENST00000296503 MATKP42679 507 aa12.54□□□□□ -0.4
HMGB2-201ENST00000296503 CLCN6P51797 869 aa12.54□□□□□ -0.4
HMGB2-201ENST00000296503 NRLP54845 237 aa12.54□□□□□ -0.4
HMGB2-201ENST00000296503 HNRNPH2P55795 449 aaKnown RBP12.54□□□□□ -0.4
HMGB2-201ENST00000296503 CLEC16AQ2KHT3 1053 aa12.54□□□□□ -0.4
HMGB2-201ENST00000296503 ZNF528Q3MIS6 628 aa12.54□□□□□ -0.4
HMGB2-201ENST00000296503 C10orf76Q5T2E6 689 aa12.54□□□□□ -0.4
HMGB2-201ENST00000296503 RFWD3Q6PCD5 774 aa12.54□□□□□ -0.4
HMGB2-201ENST00000296503 FAM217AQ8IXS0 508 aa12.54□□□□□ -0.4
HMGB2-201ENST00000296503 ATP6V0D2Q8N8Y2 350 aa12.54□□□□□ -0.4
HMGB2-201ENST00000296503 USP33Q8TEY7 942 aa12.54□□□□□ -0.4
HMGB2-201ENST00000296503 ATRIPQ8WXE1 791 aa12.54□□□□□ -0.4
HMGB2-201ENST00000296503 ZNF592Q92610 1267 aa12.54□□□□□ -0.4
HMGB2-201ENST00000296503 XPO4Q9C0E2 1151 aaKnown RBP12.54□□□□□ -0.4
HMGB2-201ENST00000296503 C2orf42Q9NWW7 574 aa12.54□□□□□ -0.4
HMGB2-201ENST00000296503 RRN3Q9NYV6 651 aa12.54□□□□□ -0.4
HMGB2-201ENST00000296503 STOML2Q9UJZ1 356 aa12.54□□□□□ -0.4
HMGB2-201ENST00000296503 STAP1Q9ULZ2 295 aa12.54□□□□□ -0.4
HMGB2-201ENST00000296503 R4GN57 208 aa12.54□□□□□ -0.4
HMGB2-201ENST00000296503 CACNA1HO95180 2353 aa12.54□□□□□ -0.4
HMGB2-201ENST00000296503 ANTXRLA6NF34 631 aa12.53□□□□□ -0.4
HMGB2-201ENST00000296503 EFCAB8A8MWE9 144 aa12.53□□□□□ -0.4
HMGB2-201ENST00000296503 CBFA2T2O43439 604 aa12.53□□□□□ -0.4
HMGB2-201ENST00000296503 CISD3P0C7P0 127 aa12.53□□□□□ -0.4
HMGB2-201ENST00000296503 SLC2A3P11169 496 aa12.53□□□□□ -0.4
HMGB2-201ENST00000296503 ABCB4P21439 1286 aa12.53□□□□□ -0.4
HMGB2-201ENST00000296503 CCR1P32246 355 aa12.53□□□□□ -0.4
HMGB2-201ENST00000296503 SCNN1AP37088 669 aa12.53□□□□□ -0.4
HMGB2-201ENST00000296503 PBX1P40424 430 aa12.53□□□□□ -0.4
HMGB2-201ENST00000296503 SULT1E1P49888 294 aa12.53□□□□□ -0.4
HMGB2-201ENST00000296503 MRPS21P82921 87 aaKnown RBP12.53□□□□□ -0.4
HMGB2-201ENST00000296503 FIGNQ5HY92 759 aa12.53□□□□□ -0.4
HMGB2-201ENST00000296503 TMCO3Q6UWJ1 677 aa12.53□□□□□ -0.4
HMGB2-201ENST00000296503 SND1Q7KZF4 910 aaKnown RBP eCLIP12.53□□□□□ -0.4
HMGB2-201ENST00000296503 PHTF2Q8N3S3 785 aa12.53□□□□□ -0.4
HMGB2-201ENST00000296503 CCDC33Q8N5R6 958 aa12.53□□□□□ -0.4
HMGB2-201ENST00000296503 TERB1Q8NA31 727 aa12.53□□□□□ -0.4
HMGB2-201ENST00000296503 ACDQ96AP0 544 aa12.53□□□□□ -0.4
HMGB2-201ENST00000296503 HAUS4Q9H6D7 363 aa12.53□□□□□ -0.4
HMGB2-201ENST00000296503 PRMT8Q9NR22 394 aaPredicted RBP12.53□□□□□ -0.4
HMGB2-201ENST00000296503 POLR3BQ9NW08 1133 aaPredicted RBP12.53□□□□□ -0.4
HMGB2-201ENST00000296503 AIPL1Q9NZN9 384 aa12.53□□□□□ -0.4
HMGB2-201ENST00000296503 STIM2Q9P246 746 aa12.53□□□□□ -0.4
HMGB2-201ENST00000296503 TBL1XO60907 577 aa12.53□□□□□ -0.4
HMGB2-201ENST00000296503 IGLV3-25P01717 112 aa12.53□□□□□ -0.4
HMGB2-201ENST00000296503 CALB1P05937 261 aa12.53□□□□□ -0.4
HMGB2-201ENST00000296503 ETF1P62495 437 aaKnown RBP12.53□□□□□ -0.4
HMGB2-201ENST00000296503 CENPCQ03188 943 aa12.53□□□□□ -0.4
HMGB2-201ENST00000296503 KLHL30Q0D2K2 578 aa12.53□□□□□ -0.4
HMGB2-201ENST00000296503 PIK3R6Q5UE93 754 aa12.53□□□□□ -0.4
HMGB2-201ENST00000296503 E4F1Q66K89 784 aaPredicted RBP12.53□□□□□ -0.4
HMGB2-201ENST00000296503 HEATR6Q6AI08 1181 aaKnown RBP12.53□□□□□ -0.4
HMGB2-201ENST00000296503 ZC3H14Q6PJT7 736 aaKnown RBP12.53□□□□□ -0.4
HMGB2-201ENST00000296503 P2RY11Q96G91 374 aa12.53□□□□□ -0.4
HMGB2-201ENST00000296503 BTN2A3PQ96KV6 586 aa12.53□□□□□ -0.4
HMGB2-201ENST00000296503 PHOX2BQ99453 314 aa12.53□□□□□ -0.4
HMGB2-201ENST00000296503 FAM126AQ9BYI3 521 aaPredicted RBP12.53□□□□□ -0.4
HMGB2-201ENST00000296503 SLC2A11Q9BYW1 496 aa12.53□□□□□ -0.4
HMGB2-201ENST00000296503 TTYH3Q9C0H2 523 aa12.53□□□□□ -0.4
HMGB2-201ENST00000296503 ZDHHC4Q9NPG8 344 aa12.53□□□□□ -0.4
HMGB2-201ENST00000296503 METTL5Q9NRN9 209 aaKnown RBP12.53□□□□□ -0.4
HMGB2-201ENST00000296503 ZSCAN32Q9NX65 697 aa12.53□□□□□ -0.4
HMGB2-201ENST00000296503 FEZ2Q9UHY8 353 aaPredicted RBP12.53□□□□□ -0.4
HMGB2-201ENST00000296503 FBXO10Q9UK96 956 aa12.53□□□□□ -0.4
HMGB2-201ENST00000296503 TYW5A2RUC4 315 aaKnown RBP12.52□□□□□ -0.41
HMGB2-201ENST00000296503 TMCO5BA8MYB1 307 aa12.52□□□□□ -0.41
HMGB2-201ENST00000296503 KCNU1A8MYU2 1149 aa12.52□□□□□ -0.41
HMGB2-201ENST00000296503 KLF8O95600 359 aaPredicted RBP12.52□□□□□ -0.41
HMGB2-201ENST00000296503 SLC6A4P31645 630 aa12.52□□□□□ -0.41
HMGB2-201ENST00000296503 PLA2G5P39877 138 aa12.52□□□□□ -0.41
HMGB2-201ENST00000296503 DEUP1Q05D60 604 aa12.52□□□□□ -0.41
HMGB2-201ENST00000296503 DMC1Q14565 340 aa12.52□□□□□ -0.41
HMGB2-201ENST00000296503 SLC25A52Q3SY17 297 aa12.52□□□□□ -0.41
HMGB2-201ENST00000296503 FAM133BQ5BKY9 247 aaKnown RBP12.52□□□□□ -0.41
HMGB2-201ENST00000296503 RAP1GAP2Q684P5 730 aa12.52□□□□□ -0.41
HMGB2-201ENST00000296503 NADSYN1Q6IA69 706 aa12.52□□□□□ -0.41
HMGB2-201ENST00000296503 ACAD10Q6JQN1 1059 aa12.52□□□□□ -0.41
HMGB2-201ENST00000296503 SYT13Q7L8C5 426 aa12.52□□□□□ -0.41
HMGB2-201ENST00000296503 CHSY1Q86X52 802 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms