RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 STRADAQ7RTN6 431 aa12.15□□□□□ -0.47
RHO-201ENST00000296271 NLRP9Q7RTR0 991 aa12.15□□□□□ -0.47
RHO-201ENST00000296271 ZNF567Q8N184 647 aa12.15□□□□□ -0.47
RHO-201ENST00000296271 RTP3Q9BQQ7 232 aa12.15□□□□□ -0.47
RHO-201ENST00000296271 SYT15Q9BQS2 421 aa12.15□□□□□ -0.47
RHO-201ENST00000296271 PHACTR1Q9C0D0 580 aa12.15□□□□□ -0.47
RHO-201ENST00000296271 UBP1Q9NZI7 540 aa12.15□□□□□ -0.47
RHO-201ENST00000296271 MARCOQ9UEW3 520 aaPredicted RBP12.15□□□□□ -0.47
RHO-201ENST00000296271 NUDT5Q9UKK9 219 aa12.15□□□□□ -0.47
RHO-201ENST00000296271 INPP5FQ9Y2H2 1132 aa12.15□□□□□ -0.47
RHO-201ENST00000296271 TRPM7Q96QT4 1865 aa12.14□□□□□ -0.47
RHO-201ENST00000296271 DHRS4L1P0CG22 281 aa12.14□□□□□ -0.47
RHO-201ENST00000296271 CD52P31358 61 aa12.14□□□□□ -0.47
RHO-201ENST00000296271 PNPLA4P41247 253 aa12.14□□□□□ -0.47
RHO-201ENST00000296271 ACADSBP45954 432 aa12.14□□□□□ -0.47
RHO-201ENST00000296271 MRPS6P82932 125 aaKnown RBP12.14□□□□□ -0.47
RHO-201ENST00000296271 SLC18A2Q05940 514 aa12.14□□□□□ -0.47
RHO-201ENST00000296271 FAM35AQ86V20 835 aa12.14□□□□□ -0.47
RHO-201ENST00000296271 TOP6BLQ8N6T0 577 aa12.14□□□□□ -0.47
RHO-201ENST00000296271 ARNTL2Q8WYA1 636 aa12.14□□□□□ -0.47
RHO-201ENST00000296271 NT5C3BQ969T7 300 aa12.14□□□□□ -0.47
RHO-201ENST00000296271 AZIN2Q96A70 460 aa12.14□□□□□ -0.47
RHO-201ENST00000296271 ATXN7L3BQ96GX2 97 aa12.14□□□□□ -0.47
RHO-201ENST00000296271 LRRC37BQ96QE4 947 aa12.14□□□□□ -0.47
RHO-201ENST00000296271 GORASP1Q9BQQ3 440 aa12.14□□□□□ -0.47
RHO-201ENST00000296271 KCNK13Q9HB14 408 aa12.14□□□□□ -0.47
RHO-201ENST00000296271 WDR6Q9NNW5 1121 aaKnown RBP12.14□□□□□ -0.47
RHO-201ENST00000296271 FETUBQ9UGM5 382 aa12.14□□□□□ -0.47
RHO-201ENST00000296271 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.14□□□□□ -0.47
RHO-201ENST00000296271 USH1CQ9Y6N9 552 aa12.14□□□□□ -0.47
RHO-201ENST00000296271 FAM237BA0A1B0GVD1 139 aa12.14□□□□□ -0.47
RHO-201ENST00000296271 CFAP69A5D8W1 941 aa12.14□□□□□ -0.47
RHO-201ENST00000296271 COPEO14579 308 aa12.14□□□□□ -0.47
RHO-201ENST00000296271 CAPN9O14815 690 aa12.14□□□□□ -0.47
RHO-201ENST00000296271 DAB1O75553 588 aa12.14□□□□□ -0.47
RHO-201ENST00000296271 FAM200BP0CF97 657 aa12.14□□□□□ -0.47
RHO-201ENST00000296271 KITP10721 976 aa12.14□□□□□ -0.47
RHO-201ENST00000296271 ERCC2P18074 760 aa12.14□□□□□ -0.47
RHO-201ENST00000296271 PRKCHP24723 683 aa12.14□□□□□ -0.47
RHO-201ENST00000296271 LRPAP1P30533 357 aa12.14□□□□□ -0.47
RHO-201ENST00000296271 NOS2P35228 1153 aa12.14□□□□□ -0.47
RHO-201ENST00000296271 MAGEA6P43360 314 aa12.14□□□□□ -0.47
RHO-201ENST00000296271 SERPINB4P48594 390 aa12.14□□□□□ -0.47
RHO-201ENST00000296271 FKBP1BP68106 108 aa12.14□□□□□ -0.47
RHO-201ENST00000296271 CDC42EP1Q00587 391 aa12.14□□□□□ -0.47
RHO-201ENST00000296271 ACCSLQ4AC99 568 aa12.14□□□□□ -0.47
RHO-201ENST00000296271 HSF5Q4G112 596 aaPredicted RBP12.14□□□□□ -0.47
RHO-201ENST00000296271 TTC39BQ5VTQ0 682 aaPredicted RBP12.14□□□□□ -0.47
RHO-201ENST00000296271 DSTYKQ6XUX3 929 aa12.14□□□□□ -0.47
RHO-201ENST00000296271 HACE1Q8IYU2 909 aa12.14□□□□□ -0.47
RHO-201ENST00000296271 SCAMP5Q8TAC9 235 aa12.14□□□□□ -0.47
RHO-201ENST00000296271 TRIB2Q92519 343 aa12.14□□□□□ -0.47
RHO-201ENST00000296271 CELF6Q96J87 481 aaKnown RBP12.14□□□□□ -0.47
RHO-201ENST00000296271 TSSK1BQ9BXA7 367 aa12.14□□□□□ -0.47
RHO-201ENST00000296271 FAM124BQ9H5Z6 455 aaPredicted RBP12.14□□□□□ -0.47
RHO-201ENST00000296271 ARHGEF3Q9NR81 526 aa12.14□□□□□ -0.47
RHO-201ENST00000296271 SYBUQ9NX95 663 aa12.14□□□□□ -0.47
RHO-201ENST00000296271 A0A0A0MRY4 1105 aa12.13□□□□□ -0.47
RHO-201ENST00000296271 EEF2KO00418 725 aaKnown RBP12.13□□□□□ -0.47
RHO-201ENST00000296271 NDC80O14777 642 aa12.13□□□□□ -0.47
RHO-201ENST00000296271 UNC5CO95185 931 aa12.13□□□□□ -0.47
RHO-201ENST00000296271 BDNFP23560 247 aa12.13□□□□□ -0.47
RHO-201ENST00000296271 HOXC8P31273 242 aa12.13□□□□□ -0.47
RHO-201ENST00000296271 DAOAP59103 153 aa12.13□□□□□ -0.47
RHO-201ENST00000296271 SEMA5AQ13591 1074 aa12.13□□□□□ -0.47
RHO-201ENST00000296271 PPM1JQ5JR12 505 aa12.13□□□□□ -0.47
RHO-201ENST00000296271 RFX8Q6ZV50 586 aa12.13□□□□□ -0.47
RHO-201ENST00000296271 BHLHA9Q7RTU4 235 aa12.13□□□□□ -0.47
RHO-201ENST00000296271 LRRTM3Q86VH5 581 aa12.13□□□□□ -0.47
RHO-201ENST00000296271 AGAP11Q8TF27 550 aa12.13□□□□□ -0.47
RHO-201ENST00000296271 SPATA13Q96N96 652 aa12.13□□□□□ -0.47
RHO-201ENST00000296271 PNPLA8Q9NP80 782 aa12.13□□□□□ -0.47
RHO-201ENST00000296271 DDIT4Q9NX09 232 aa12.13□□□□□ -0.47
RHO-201ENST00000296271 TSC2P49815 1807 aa12.13□□□□□ -0.47
RHO-201ENST00000296271 XPOTO43592 962 aaKnown RBP12.13□□□□□ -0.47
RHO-201ENST00000296271 THP07101 528 aa12.13□□□□□ -0.47
RHO-201ENST00000296271 SNRPAP09012 282 aaKnown RBP12.13□□□□□ -0.47
RHO-201ENST00000296271 ERVK-10P10266 1014 aa12.13□□□□□ -0.47
RHO-201ENST00000296271 ADRA1BP35368 520 aa12.13□□□□□ -0.47
RHO-201ENST00000296271 DPYSQ14117 519 aa12.13□□□□□ -0.47
RHO-201ENST00000296271 ATG14Q6ZNE5 492 aa12.13□□□□□ -0.47
RHO-201ENST00000296271 PID1Q7Z2X4 250 aa12.13□□□□□ -0.47
RHO-201ENST00000296271 BNIPLQ7Z465 357 aa12.13□□□□□ -0.47
RHO-201ENST00000296271 IFNL1Q8IU54 200 aa12.13□□□□□ -0.47
RHO-201ENST00000296271 NDUFAF2Q8N183 169 aa12.13□□□□□ -0.47
RHO-201ENST00000296271 MCUQ8NE86 351 aa12.13□□□□□ -0.47
RHO-201ENST00000296271 OR52K1Q8NGK4 314 aa12.13□□□□□ -0.47
RHO-201ENST00000296271 GSDMBQ8TAX9 411 aa12.13□□□□□ -0.47
RHO-201ENST00000296271 GRAMD1AQ96CP6 724 aa12.13□□□□□ -0.47
RHO-201ENST00000296271 SLC7A6OSQ96CW6 309 aaPredicted RBP12.13□□□□□ -0.47
RHO-201ENST00000296271 PGBD4Q96DM1 585 aa12.13□□□□□ -0.47
RHO-201ENST00000296271 FCRL3Q96P31 734 aaPredicted RBP12.13□□□□□ -0.47
RHO-201ENST00000296271 SLC2A13Q96QE2 648 aa12.13□□□□□ -0.47
RHO-201ENST00000296271 SSU72Q9NP77 194 aaKnown RBP12.13□□□□□ -0.47
RHO-201ENST00000296271 ZNF358Q9NW07 568 aa12.13□□□□□ -0.47
RHO-201ENST00000296271 ARMCX1Q9P291 453 aa12.13□□□□□ -0.47
RHO-201ENST00000296271 HEY2Q9UBP5 337 aa12.13□□□□□ -0.47
RHO-201ENST00000296271 GTF2IRD1Q9UHL9 959 aa12.13□□□□□ -0.47
RHO-201ENST00000296271 UNCXA6NJT0 531 aa12.12□□□□□ -0.47
RHO-201ENST00000296271 FAM159BA6NKW6 160 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms