RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 PPP1R11O60927 126 aaPredicted RBP18.15■□□□□ 0.5
CDC42EP3-201ENST00000295324 ERVK-10P10266 1014 aa18.15■□□□□ 0.5
CDC42EP3-201ENST00000295324 CMTM5Q96DZ9 223 aa18.15■□□□□ 0.5
CDC42EP3-201ENST00000295324 ZIM3Q96PE6 472 aa18.15■□□□□ 0.5
CDC42EP3-201ENST00000295324 ECT2Q9H8V3 914 aa18.15■□□□□ 0.5
CDC42EP3-201ENST00000295324 LTBP3Q9NS15 1303 aa18.15■□□□□ 0.5
CDC42EP3-201ENST00000295324 ABCC6O95255 1503 aa18.15■□□□□ 0.5
CDC42EP3-201ENST00000295324 OR1D2P34982 312 aa18.15■□□□□ 0.5
CDC42EP3-201ENST00000295324 BMT2Q1RMZ1 405 aa18.15■□□□□ 0.5
CDC42EP3-201ENST00000295324 NYAP1Q6ZVC0 841 aa18.15■□□□□ 0.5
CDC42EP3-201ENST00000295324 IFNL1Q8IU54 200 aa18.15■□□□□ 0.5
CDC42EP3-201ENST00000295324 CASKIN2Q8WXE0 1202 aa18.15■□□□□ 0.5
CDC42EP3-201ENST00000295324 KCNK1O00180 336 aa18.15■□□□□ 0.5
CDC42EP3-201ENST00000295324 ENO3P13929 434 aaPredicted RBP18.15■□□□□ 0.5
CDC42EP3-201ENST00000295324 MAPK1P28482 360 aa18.15■□□□□ 0.5
CDC42EP3-201ENST00000295324 PGM1P36871 562 aa18.15■□□□□ 0.5
CDC42EP3-201ENST00000295324 ANXA11P50995 505 aaKnown RBP18.15■□□□□ 0.5
CDC42EP3-201ENST00000295324 PRKCZQ05513 592 aa18.15■□□□□ 0.5
CDC42EP3-201ENST00000295324 DNAL1Q4LDG9 190 aa18.15■□□□□ 0.5
CDC42EP3-201ENST00000295324 LRRC23Q53EV4 343 aaPredicted RBP18.15■□□□□ 0.5
CDC42EP3-201ENST00000295324 TRMT11Q7Z4G4 463 aaKnown RBP18.15■□□□□ 0.5
CDC42EP3-201ENST00000295324 TSEN34Q9BSV6 310 aaKnown RBP18.15■□□□□ 0.5
CDC42EP3-201ENST00000295324 MYOM1P52179 1685 aa18.15■□□□□ 0.5
CDC42EP3-201ENST00000295324 RNF103O00237 685 aa18.14■□□□□ 0.5
CDC42EP3-201ENST00000295324 KCNT2Q6UVM3 1135 aa18.14■□□□□ 0.5
CDC42EP3-201ENST00000295324 GLIS3Q8NEA6 775 aa18.14■□□□□ 0.5
CDC42EP3-201ENST00000295324 OR5B17Q8NGF7 314 aa18.14■□□□□ 0.5
CDC42EP3-201ENST00000295324 OR9Q1Q8NGQ5 310 aa18.14■□□□□ 0.5
CDC42EP3-201ENST00000295324 HES6Q96HZ4 224 aa18.14■□□□□ 0.5
CDC42EP3-201ENST00000295324 NIFKQ9BYG3 293 aaKnown RBP18.14■□□□□ 0.5
CDC42EP3-201ENST00000295324 SLIT2O94813 1529 aa18.14■□□□□ 0.49
CDC42EP3-201ENST00000295324 KLRC4O43908 158 aa18.14■□□□□ 0.49
CDC42EP3-201ENST00000295324 FGF19O95750 216 aa18.14■□□□□ 0.49
CDC42EP3-201ENST00000295324 KAT5Q92993 513 aa18.14■□□□□ 0.49
CDC42EP3-201ENST00000295324 GANQ9H2C0 597 aa18.14■□□□□ 0.49
CDC42EP3-201ENST00000295324 TLE6Q9H808 572 aa18.14■□□□□ 0.49
CDC42EP3-201ENST00000295324 ZCCHC17Q9NP64 241 aaKnown RBP18.14■□□□□ 0.49
CDC42EP3-201ENST00000295324 RWDD3Q9Y3V2 267 aa18.14■□□□□ 0.49
CDC42EP3-201ENST00000295324 USP15Q9Y4E8 981 aaPredicted RBP18.14■□□□□ 0.49
CDC42EP3-201ENST00000295324 CFAP73A6NFT4 308 aa18.14■□□□□ 0.49
CDC42EP3-201ENST00000295324 EEF1DP29692 281 aaKnown RBP18.14■□□□□ 0.49
CDC42EP3-201ENST00000295324 USP45Q70EL2 814 aa18.14■□□□□ 0.49
CDC42EP3-201ENST00000295324 KCNK16Q96T55 309 aa18.14■□□□□ 0.49
CDC42EP3-201ENST00000295324 NOP53Q9NZM5 478 aaKnown RBP18.14■□□□□ 0.49
CDC42EP3-201ENST00000295324 AURKCQ9UQB9 309 aa18.14■□□□□ 0.49
CDC42EP3-201ENST00000295324 SLC27A5Q9Y2P5 690 aa18.14■□□□□ 0.49
CDC42EP3-201ENST00000295324 LRRC10BA6NIK2 292 aa18.14■□□□□ 0.49
CDC42EP3-201ENST00000295324 NT5C1B-RDH14C9J2C7 533 aa18.14■□□□□ 0.49
CDC42EP3-201ENST00000295324 APOC4-APOC2K7ER74 178 aa18.14■□□□□ 0.49
CDC42EP3-201ENST00000295324 APOC2P02655 101 aa18.14■□□□□ 0.49
CDC42EP3-201ENST00000295324 HSD17B3P37058 310 aa18.14■□□□□ 0.49
CDC42EP3-201ENST00000295324 PRKCIP41743 596 aa18.14■□□□□ 0.49
CDC42EP3-201ENST00000295324 CD151P48509 253 aa18.14■□□□□ 0.49
CDC42EP3-201ENST00000295324 SNRPD1P62314 119 aaKnown RBP18.14■□□□□ 0.49
CDC42EP3-201ENST00000295324 RBBP8Q99708 897 aa18.14■□□□□ 0.49
CDC42EP3-201ENST00000295324 CCDC3Q9BQI4 270 aa18.14■□□□□ 0.49
CDC42EP3-201ENST00000295324 C16orf89Q6UX73 402 aa18.14■□□□□ 0.49
CDC42EP3-201ENST00000295324 METTL3Q86U44 580 aaKnown RBP18.14■□□□□ 0.49
CDC42EP3-201ENST00000295324 RGL4Q8IZJ4 473 aa18.14■□□□□ 0.49
CDC42EP3-201ENST00000295324 CEP41Q9BYV8 373 aa18.14■□□□□ 0.49
CDC42EP3-201ENST00000295324 OR56A5P0C7T3 313 aa18.13■□□□□ 0.49
CDC42EP3-201ENST00000295324 RAP1GAP2Q684P5 730 aa18.13■□□□□ 0.49
CDC42EP3-201ENST00000295324 CACUL1Q86Y37 369 aa18.13■□□□□ 0.49
CDC42EP3-201ENST00000295324 C12orf56Q8IXR9 622 aa18.13■□□□□ 0.49
CDC42EP3-201ENST00000295324 ZNF333Q96JL9 665 aa18.13■□□□□ 0.49
CDC42EP3-201ENST00000295324 SMPD1P17405 629 aa18.13■□□□□ 0.49
CDC42EP3-201ENST00000295324 BRCC3P46736 316 aa18.13■□□□□ 0.49
CDC42EP3-201ENST00000295324 THOP1P52888 689 aa18.13■□□□□ 0.49
CDC42EP3-201ENST00000295324 CRHR2Q13324 411 aa18.13■□□□□ 0.49
CDC42EP3-201ENST00000295324 LRRC55Q6ZSA7 311 aa18.13■□□□□ 0.49
CDC42EP3-201ENST00000295324 OTOAQ7RTW8 1153 aa18.13■□□□□ 0.49
CDC42EP3-201ENST00000295324 GLT6D1Q7Z4J2 308 aa18.13■□□□□ 0.49
CDC42EP3-201ENST00000295324 ZNF438Q7Z4V0 828 aa18.13■□□□□ 0.49
CDC42EP3-201ENST00000295324 HJURPQ8NCD3 748 aaPredicted RBP18.13■□□□□ 0.49
CDC42EP3-201ENST00000295324 MTMR8Q96EF0 704 aa18.13■□□□□ 0.49
CDC42EP3-201ENST00000295324 FAM111AQ96PZ2 611 aa18.13■□□□□ 0.49
CDC42EP3-201ENST00000295324 OMDQ99983 421 aa18.13■□□□□ 0.49
CDC42EP3-201ENST00000295324 PARP4Q9UKK3 1724 aaKnown RBP18.13■□□□□ 0.49
CDC42EP3-201ENST00000295324 NCF1BA6NI72 391 aaPredicted RBP18.13■□□□□ 0.49
CDC42EP3-201ENST00000295324 NCF1CA8MVU1 366 aaPredicted RBP18.13■□□□□ 0.49
CDC42EP3-201ENST00000295324 NCF1P14598 390 aaPredicted RBP18.13■□□□□ 0.49
CDC42EP3-201ENST00000295324 ZNF143P52747 638 aaPredicted RBP18.13■□□□□ 0.49
CDC42EP3-201ENST00000295324 SMAD3P84022 425 aaKnown RBP18.13■□□□□ 0.49
CDC42EP3-201ENST00000295324 IFNEQ86WN2 208 aa18.13■□□□□ 0.49
CDC42EP3-201ENST00000295324 DNAAF5Q86Y56 855 aa18.13■□□□□ 0.49
CDC42EP3-201ENST00000295324 TUBGCP3Q96CW5 907 aa18.13■□□□□ 0.49
CDC42EP3-201ENST00000295324 ZMAT2Q96NC0 199 aaKnown RBP18.13■□□□□ 0.49
CDC42EP3-201ENST00000295324 TMEM161AQ9NX61 479 aa18.13■□□□□ 0.49
CDC42EP3-201ENST00000295324 C6orf203Q9P0P8 240 aaPredicted RBP18.13■□□□□ 0.49
CDC42EP3-201ENST00000295324 CTNNAL1Q9UBT7 734 aa18.13■□□□□ 0.49
CDC42EP3-201ENST00000295324 ARHGAP26Q9UNA1 814 aa18.13■□□□□ 0.49
CDC42EP3-201ENST00000295324 FKBP9O95302 570 aa18.13■□□□□ 0.49
CDC42EP3-201ENST00000295324 FKBP9P1Q75LS8 142 aa18.13■□□□□ 0.49
CDC42EP3-201ENST00000295324 FBXO25Q8TCJ0 367 aa18.13■□□□□ 0.49
CDC42EP3-201ENST00000295324 OSCP1Q8WVF1 389 aa18.13■□□□□ 0.49
CDC42EP3-201ENST00000295324 FAM136AQ96C01 138 aa18.13■□□□□ 0.49
CDC42EP3-201ENST00000295324 MON2Q7Z3U7 1717 aa18.13■□□□□ 0.49
CDC42EP3-201ENST00000295324 A0A0B4J269 797 aa18.12■□□□□ 0.49
CDC42EP3-201ENST00000295324 SOWAHBA6NEL2 793 aa18.12■□□□□ 0.49
CDC42EP3-201ENST00000295324 CYP2A7P20853 494 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms