RNA–Protein interactions for RNA: ENST00000293406.7

LSM12-201, Transcript of LSM12 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM12, Length 2,308 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-201ENST00000293406 PDSS2Q86YH6 399 aa19.74■□□□□ 0.75
LSM12-201ENST00000293406 SMARCAD1Q9H4L7 1026 aa19.74■□□□□ 0.75
LSM12-201ENST00000293406 FAM124BQ9H5Z6 455 aaPredicted RBP19.74■□□□□ 0.75
LSM12-201ENST00000293406 FAM49BQ9NUQ9 324 aa19.74■□□□□ 0.75
LSM12-201ENST00000293406 DNAJC28Q9NX36 388 aa19.74■□□□□ 0.75
LSM12-201ENST00000293406 DTLQ9NZJ0 730 aa19.74■□□□□ 0.75
LSM12-201ENST00000293406 AP4E1Q9UPM8 1137 aa19.74■□□□□ 0.75
LSM12-201ENST00000293406 SLC26A2P50443 739 aa19.74■□□□□ 0.75
LSM12-201ENST00000293406 SESN2P58004 480 aaPredicted RBP19.74■□□□□ 0.75
LSM12-201ENST00000293406 IGBP1P78318 339 aa19.74■□□□□ 0.75
LSM12-201ENST00000293406 AMHR2Q16671 573 aa19.74■□□□□ 0.75
LSM12-201ENST00000293406 FAM187BQ17R55 369 aa19.74■□□□□ 0.75
LSM12-201ENST00000293406 LRRC36Q1X8D7 754 aa19.74■□□□□ 0.75
LSM12-201ENST00000293406 SLC35F5Q8WV83 523 aa19.74■□□□□ 0.75
LSM12-201ENST00000293406 AFG1LQ8WV93 481 aa19.74■□□□□ 0.75
LSM12-201ENST00000293406 TFB1MQ8WVM0 346 aaKnown RBP19.74■□□□□ 0.75
LSM12-201ENST00000293406 HTR3CQ8WXA8 447 aa19.74■□□□□ 0.75
LSM12-201ENST00000293406 CSPG4P5Q96PW8 444 aa19.74■□□□□ 0.75
LSM12-201ENST00000293406 SORT1Q99523 831 aa19.74■□□□□ 0.75
LSM12-201ENST00000293406 SPATC1LQ9H0A9 340 aa19.74■□□□□ 0.75
LSM12-201ENST00000293406 PIM2Q9P1W9 311 aa19.74■□□□□ 0.75
LSM12-201ENST00000293406 RNASEH1O60930 286 aaKnown RBP19.73■□□□□ 0.75
LSM12-201ENST00000293406 PDE5AO76074 875 aa19.73■□□□□ 0.75
LSM12-201ENST00000293406 STAU1O95793 577 aaKnown RBP19.73■□□□□ 0.75
LSM12-201ENST00000293406 ITGA2BP08514 1039 aa19.73■□□□□ 0.75
LSM12-201ENST00000293406 SETSIPP0DME0 302 aa19.73■□□□□ 0.75
LSM12-201ENST00000293406 MYL4P12829 197 aa19.73■□□□□ 0.75
LSM12-201ENST00000293406 FDFT1P37268 417 aa19.73■□□□□ 0.75
LSM12-201ENST00000293406 CCNIQ14094 377 aa19.73■□□□□ 0.75
LSM12-201ENST00000293406 CFAP157Q5JU67 520 aa19.73■□□□□ 0.75
LSM12-201ENST00000293406 PDPK2PQ6A1A2 396 aa19.73■□□□□ 0.75
LSM12-201ENST00000293406 ACAD11Q709F0 780 aa19.73■□□□□ 0.75
LSM12-201ENST00000293406 APOBEC3FQ8IUX4 373 aaKnown RBP19.73■□□□□ 0.75
LSM12-201ENST00000293406 ARHGAP18Q8N392 663 aa19.73■□□□□ 0.75
LSM12-201ENST00000293406 ACTRT2Q8TDY3 377 aa19.73■□□□□ 0.75
LSM12-201ENST00000293406 JADE3Q92613 823 aa19.73■□□□□ 0.75
LSM12-201ENST00000293406 CMTM5Q96DZ9 223 aa19.73■□□□□ 0.75
LSM12-201ENST00000293406 SHCBP1LQ9BZQ2 653 aa19.73■□□□□ 0.75
LSM12-201ENST00000293406 VCX3BQ9H321 246 aa19.73■□□□□ 0.75
LSM12-201ENST00000293406 CYP4F11Q9HBI6 524 aa19.73■□□□□ 0.75
LSM12-201ENST00000293406 PIH1D1Q9NWS0 290 aaKnown RBP19.73■□□□□ 0.75
LSM12-201ENST00000293406 ZDHHC7Q9NXF8 308 aa19.73■□□□□ 0.75
LSM12-201ENST00000293406 A0A087WZ62 844 aa19.73■□□□□ 0.75
LSM12-201ENST00000293406 A0A0A0MRY4 1105 aa19.73■□□□□ 0.75
LSM12-201ENST00000293406 VAV1P15498 845 aa19.73■□□□□ 0.75
LSM12-201ENST00000293406 SNX16P57768 344 aa19.73■□□□□ 0.75
LSM12-201ENST00000293406 INHBEP58166 350 aa19.73■□□□□ 0.75
LSM12-201ENST00000293406 RASIP1Q5U651 963 aa19.73■□□□□ 0.75
LSM12-201ENST00000293406 PGM2L1Q6PCE3 622 aa19.73■□□□□ 0.75
LSM12-201ENST00000293406 AEBP2Q6ZN18 517 aaPredicted RBP19.73■□□□□ 0.75
LSM12-201ENST00000293406 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.73■□□□□ 0.753e-10■□□□□ 9.2
LSM12-201ENST00000293406 CCDC124Q96CT7 223 aaKnown RBP19.73■□□□□ 0.75
LSM12-201ENST00000293406 SPATA13Q96N96 652 aa19.73■□□□□ 0.75
LSM12-201ENST00000293406 KCTD15Q96SI1 283 aaPredicted RBP19.73■□□□□ 0.75
LSM12-201ENST00000293406 FDXACB1Q9BRP7 624 aaPredicted RBP19.73■□□□□ 0.75
LSM12-201ENST00000293406 MTMR10Q9NXD2 777 aa19.73■□□□□ 0.75
LSM12-201ENST00000293406 IL1RAPL1Q9NZN1 696 aa19.73■□□□□ 0.75
LSM12-201ENST00000293406 CDH22Q9UJ99 828 aa19.73■□□□□ 0.75
LSM12-201ENST00000293406 PSAT1Q9Y617 370 aa19.73■□□□□ 0.75
LSM12-201ENST00000293406 GABBR2O75899 941 aa19.72■□□□□ 0.75
LSM12-201ENST00000293406 SORBS2O94875 1100 aaKnown RBP19.72■□□□□ 0.75
LSM12-201ENST00000293406 PGAM1P18669 254 aa19.72■□□□□ 0.75
LSM12-201ENST00000293406 NCF2P19878 526 aaPredicted RBP19.72■□□□□ 0.75
LSM12-201ENST00000293406 MGAT1P26572 445 aa19.72■□□□□ 0.75
LSM12-201ENST00000293406 PTPN9P43378 593 aa19.72■□□□□ 0.75
LSM12-201ENST00000293406 CDK7P50613 346 aa19.72■□□□□ 0.75
LSM12-201ENST00000293406 NCBP2-AS2Q69YL0 99 aa19.72■□□□□ 0.75
LSM12-201ENST00000293406 LRRC8BQ6P9F7 803 aa19.72■□□□□ 0.75
LSM12-201ENST00000293406 RNF111Q6ZNA4 994 aa19.72■□□□□ 0.75
LSM12-201ENST00000293406 ATG14Q6ZNE5 492 aa19.72■□□□□ 0.75
LSM12-201ENST00000293406 ZDHHC17Q8IUH5 632 aa19.72■□□□□ 0.75
LSM12-201ENST00000293406 COLGALT1Q8NBJ5 622 aa19.72■□□□□ 0.75
LSM12-201ENST00000293406 MPHOSPH6Q99547 160 aaKnown RBP19.72■□□□□ 0.75
LSM12-201ENST00000293406 MRPL45Q9BRJ2 306 aaKnown RBP19.72■□□□□ 0.75
LSM12-201ENST00000293406 TXNDC16Q9P2K2 825 aa19.72■□□□□ 0.75
LSM12-201ENST00000293406 COPG2Q9UBF2 871 aa19.72■□□□□ 0.75
LSM12-201ENST00000293406 AP1G2O75843 785 aa19.71■□□□□ 0.75
LSM12-201ENST00000293406 C22orf31O95567 290 aa19.71■□□□□ 0.75
LSM12-201ENST00000293406 RALBP11234 206 aa19.71■□□□□ 0.75
LSM12-201ENST00000293406 ARF4P18085 180 aaPredicted RBP19.71■□□□□ 0.75
LSM12-201ENST00000293406 ABCE1P61221 599 aaKnown RBP19.71■□□□□ 0.75
LSM12-201ENST00000293406 BTKQ06187 659 aa19.71■□□□□ 0.75
LSM12-201ENST00000293406 NAB1Q13506 487 aa19.71■□□□□ 0.75
LSM12-201ENST00000293406 INSCQ1MX18 579 aa19.71■□□□□ 0.75
LSM12-201ENST00000293406 PPM1JQ5JR12 505 aa19.71■□□□□ 0.75
LSM12-201ENST00000293406 NOL9Q5SY16 702 aaKnown RBP19.71■□□□□ 0.75
LSM12-201ENST00000293406 VWA5B1Q5TIE3 1220 aa19.71■□□□□ 0.75
LSM12-201ENST00000293406 BSPRYQ5W0U4 402 aa19.71■□□□□ 0.75
LSM12-201ENST00000293406 LPCAT4Q643R3 524 aa19.71■□□□□ 0.75
LSM12-201ENST00000293406 COPS5Q92905 334 aa19.71■□□□□ 0.75
LSM12-201ENST00000293406 KLHL4Q9C0H6 718 aa19.71■□□□□ 0.75
LSM12-201ENST00000293406 TMEM216Q9P0N5 145 aa19.71■□□□□ 0.75
LSM12-201ENST00000293406 ADAMTS6Q9UKP5 1117 aa19.71■□□□□ 0.75
LSM12-201ENST00000293406 MFHAS1Q9Y4C4 1052 aa19.71■□□□□ 0.75
LSM12-201ENST00000293406 PRKCGP05129 697 aa19.71■□□□□ 0.75
LSM12-201ENST00000293406 PGK2P07205 417 aa19.71■□□□□ 0.75
LSM12-201ENST00000293406 ALOX15P16050 662 aaPredicted RBP19.71■□□□□ 0.75
LSM12-201ENST00000293406 TYK2P29597 1187 aa19.71■□□□□ 0.75
LSM12-201ENST00000293406 GSTT1P30711 240 aa19.71■□□□□ 0.75
LSM12-201ENST00000293406 ARRB2P32121 409 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms