RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 MRFAP1Q9Y605 127 aa8.73□□□□□ -1.01
PTPDC1-201ENST00000288976 MIPP30301 263 aa8.73□□□□□ -1.01
PTPDC1-201ENST00000288976 SLC7A9P82251 487 aa8.73□□□□□ -1.01
PTPDC1-201ENST00000288976 DEUP1Q05D60 604 aa8.73□□□□□ -1.01
PTPDC1-201ENST00000288976 ARHGAP15Q53QZ3 475 aa8.73□□□□□ -1.01
PTPDC1-201ENST00000288976 RWDD4Q6NW29 188 aaKnown RBP8.73□□□□□ -1.01
PTPDC1-201ENST00000288976 ANKRD54Q6NXT1 300 aa8.73□□□□□ -1.01
PTPDC1-201ENST00000288976 FAF2Q96CS3 445 aa8.73□□□□□ -1.01
PTPDC1-201ENST00000288976 RPGRIP1Q96KN7 1286 aa8.73□□□□□ -1.01
PTPDC1-201ENST00000288976 C1orf74Q96LT6 269 aa8.73□□□□□ -1.01
PTPDC1-201ENST00000288976 HAPLN3Q96S86 360 aa8.73□□□□□ -1.01
PTPDC1-201ENST00000288976 OSBPL2Q9H1P3 480 aa8.73□□□□□ -1.01
PTPDC1-201ENST00000288976 L2HGDHQ9H9P8 463 aa8.73□□□□□ -1.01
PTPDC1-201ENST00000288976 ZNF334Q9HCZ1 680 aaPredicted RBP8.73□□□□□ -1.01
PTPDC1-201ENST00000288976 WDR6Q9NNW5 1121 aaKnown RBP8.73□□□□□ -1.01
PTPDC1-201ENST00000288976 CHORDC1Q9UHD1 332 aaPredicted RBP8.73□□□□□ -1.01
PTPDC1-201ENST00000288976 KCNU1A8MYU2 1149 aa8.73□□□□□ -1.01
PTPDC1-201ENST00000288976 EPCAMP16422 314 aa8.73□□□□□ -1.01
PTPDC1-201ENST00000288976 NRIP1P48552 1158 aa8.73□□□□□ -1.01
PTPDC1-201ENST00000288976 MTMR3Q13615 1198 aa8.73□□□□□ -1.01
PTPDC1-201ENST00000288976 SYPL2Q5VXT5 272 aa8.73□□□□□ -1.01
PTPDC1-201ENST00000288976 CCDC89Q8N998 374 aa8.73□□□□□ -1.01
PTPDC1-201ENST00000288976 TSC1Q92574 1164 aa8.73□□□□□ -1.01
PTPDC1-201ENST00000288976 ZNF707Q96C28 371 aaPredicted RBP8.73□□□□□ -1.01
PTPDC1-201ENST00000288976 ZNF670Q9BS34 389 aa8.73□□□□□ -1.01
PTPDC1-201ENST00000288976 TRPC7Q9HCX4 862 aa8.73□□□□□ -1.01
PTPDC1-201ENST00000288976 STOML2Q9UJZ1 356 aa8.73□□□□□ -1.01
PTPDC1-201ENST00000288976 HCFC2Q9Y5Z7 792 aa8.73□□□□□ -1.01
PTPDC1-201ENST00000288976 RIF1Q5UIP0 2472 aaKnown RBP8.73□□□□□ -1.01
PTPDC1-201ENST00000288976 M0QYT0 321 aa8.73□□□□□ -1.01
PTPDC1-201ENST00000288976 HYAL1Q12794 435 aa8.73□□□□□ -1.01
PTPDC1-201ENST00000288976 ZNF697Q5TEC3 545 aa8.73□□□□□ -1.01
PTPDC1-201ENST00000288976 UNC45BQ8IWX7 931 aa8.73□□□□□ -1.01
PTPDC1-201ENST00000288976 SMYD2Q9NRG4 433 aa8.73□□□□□ -1.01
PTPDC1-201ENST00000288976 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.73□□□□□ -1.01
PTPDC1-201ENST00000288976 SLC12A6Q9UHW9 1150 aa8.73□□□□□ -1.01
PTPDC1-201ENST00000288976 CDC23Q9UJX2 597 aa8.73□□□□□ -1.01
PTPDC1-201ENST00000288976 ASCC3Q8N3C0 2202 aaKnown RBP8.72□□□□□ -1.01
PTPDC1-201ENST00000288976 CTAGE15A4D2H0 777 aa8.72□□□□□ -1.01
PTPDC1-201ENST00000288976 GRAP2O75791 330 aa8.72□□□□□ -1.01
PTPDC1-201ENST00000288976 CTAGE8P0CG41 777 aa8.72□□□□□ -1.01
PTPDC1-201ENST00000288976 HOXC13P31276 330 aa8.72□□□□□ -1.01
PTPDC1-201ENST00000288976 CCR1P32246 355 aa8.72□□□□□ -1.01
PTPDC1-201ENST00000288976 ATP5C1P36542 298 aaKnown RBP8.72□□□□□ -1.01
PTPDC1-201ENST00000288976 TAS2R40P59535 323 aa8.72□□□□□ -1.01
PTPDC1-201ENST00000288976 TUBB4BP68371 445 aa8.72□□□□□ -1.01
PTPDC1-201ENST00000288976 ADAM15Q13444 863 aa8.72□□□□□ -1.01
PTPDC1-201ENST00000288976 NUGGCQ68CJ6 796 aa8.72□□□□□ -1.01
PTPDC1-201ENST00000288976 CTAGE6Q86UF2 777 aa8.72□□□□□ -1.01
PTPDC1-201ENST00000288976 MAP7D3Q8IWC1 876 aa8.72□□□□□ -1.01
PTPDC1-201ENST00000288976 CTAGE4Q8IX94 777 aa8.72□□□□□ -1.01
PTPDC1-201ENST00000288976 KLHL7Q8IXQ5 586 aa8.72□□□□□ -1.01
PTPDC1-201ENST00000288976 CCDC105Q8IYK2 499 aa8.72□□□□□ -1.01
PTPDC1-201ENST00000288976 COLQQ9Y215 455 aaPredicted RBP8.72□□□□□ -1.01
PTPDC1-201ENST00000288976 RAD54BQ9Y620 910 aa8.72□□□□□ -1.01
PTPDC1-201ENST00000288976 FAM47DPA6NHR8 397 aa8.72□□□□□ -1.01
PTPDC1-201ENST00000288976 C3orf70A6NLC5 250 aaPredicted RBP8.72□□□□□ -1.01
PTPDC1-201ENST00000288976 TLR5O60602 858 aa8.72□□□□□ -1.01
PTPDC1-201ENST00000288976 C15orf59Q2T9L4 293 aaPredicted RBP8.72□□□□□ -1.01
PTPDC1-201ENST00000288976 EFHC2Q5JST6 749 aa8.72□□□□□ -1.01
PTPDC1-201ENST00000288976 DCAF12L1Q5VU92 463 aa8.72□□□□□ -1.01
PTPDC1-201ENST00000288976 PDZD4Q76G19 769 aaPredicted RBP8.72□□□□□ -1.01
PTPDC1-201ENST00000288976 BBS5Q8N3I7 341 aa8.72□□□□□ -1.01
PTPDC1-201ENST00000288976 RNF217Q8TC41 542 aa8.72□□□□□ -1.01
PTPDC1-201ENST00000288976 MRPS31Q92665 395 aaKnown RBP8.72□□□□□ -1.01
PTPDC1-201ENST00000288976 FCRL2Q96LA5 508 aaPredicted RBP8.72□□□□□ -1.01
PTPDC1-201ENST00000288976 PEBP4Q96S96 227 aa8.72□□□□□ -1.01
PTPDC1-201ENST00000288976 DCLK3Q9C098 648 aa8.72□□□□□ -1.01
PTPDC1-201ENST00000288976 CALCOCO1Q9P1Z2 691 aa8.72□□□□□ -1.01
PTPDC1-201ENST00000288976 MAD1L1Q9Y6D9 718 aa8.72□□□□□ -1.01
PTPDC1-201ENST00000288976 MYO7AQ13402 2215 aa8.72□□□□□ -1.01
PTPDC1-201ENST00000288976 ATP6V0D2Q8N8Y2 350 aa8.72□□□□□ -1.01
PTPDC1-201ENST00000288976 NDRG1Q92597 394 aaKnown RBP8.72□□□□□ -1.01
PTPDC1-201ENST00000288976 KLF16Q9BXK1 252 aaPredicted RBP8.72□□□□□ -1.01
PTPDC1-201ENST00000288976 CALN1Q9BXU9 219 aa8.72□□□□□ -1.01
PTPDC1-201ENST00000288976 SIK2Q9H0K1 926 aa8.72□□□□□ -1.01
PTPDC1-201ENST00000288976 TTYH1Q9H313 450 aaPredicted RBP8.72□□□□□ -1.01
PTPDC1-201ENST00000288976 HAUS2Q9NVX0 235 aa8.72□□□□□ -1.01
PTPDC1-201ENST00000288976 PPARGC1AQ9UBK2 798 aaKnown RBP8.72□□□□□ -1.01
PTPDC1-201ENST00000288976 MTCH2Q9Y6C9 303 aa8.72□□□□□ -1.01
PTPDC1-201ENST00000288976 TRAV19A0A0A6YYK7 116 aa8.71□□□□□ -1.01
PTPDC1-201ENST00000288976 H7C0C1 242 aa8.71□□□□□ -1.01
PTPDC1-201ENST00000288976 CCL16O15467 120 aa8.71□□□□□ -1.01
PTPDC1-201ENST00000288976 KRT1P04264 644 aa8.71□□□□□ -1.01
PTPDC1-201ENST00000288976 ATP5OP48047 213 aa8.71□□□□□ -1.01
PTPDC1-201ENST00000288976 TBX4P57082 545 aa8.71□□□□□ -1.01
PTPDC1-201ENST00000288976 COG7P83436 770 aa8.71□□□□□ -1.01
PTPDC1-201ENST00000288976 CTC1Q2NKJ3 1217 aa8.71□□□□□ -1.01
PTPDC1-201ENST00000288976 C5orf22Q49AR2 442 aa8.71□□□□□ -1.01
PTPDC1-201ENST00000288976 DENND2CQ68D51 928 aa8.71□□□□□ -1.01
PTPDC1-201ENST00000288976 GPR149Q86SP6 731 aa8.71□□□□□ -1.01
PTPDC1-201ENST00000288976 CDC26Q8NHZ8 85 aa8.71□□□□□ -1.01
PTPDC1-201ENST00000288976 GPR152Q8TDT2 470 aa8.71□□□□□ -1.01
PTPDC1-201ENST00000288976 RUNDC3BQ96NL0 473 aa8.71□□□□□ -1.01
PTPDC1-201ENST00000288976 DDX50Q9BQ39 737 aaKnown RBP8.71□□□□□ -1.01
PTPDC1-201ENST00000288976 CERS4Q9HA82 394 aa8.71□□□□□ -1.01
PTPDC1-201ENST00000288976 PIGVQ9NUD9 493 aa8.71□□□□□ -1.01
PTPDC1-201ENST00000288976 DDIT4Q9NX09 232 aa8.71□□□□□ -1.01
PTPDC1-201ENST00000288976 DNMT3BQ9UBC3 853 aaKnown RBP8.71□□□□□ -1.01
PTPDC1-201ENST00000288976 APOEP02649 317 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms