RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 B3GAT3O94766 335 aa16.34■□□□□ 0.21
SMAD6-201ENST00000288840 COPAP53621 1224 aa16.34■□□□□ 0.21
SMAD6-201ENST00000288840 DLG2Q15700 870 aa16.34■□□□□ 0.21
SMAD6-201ENST00000288840 SOWAHAQ2M3V2 549 aa16.34■□□□□ 0.21
SMAD6-201ENST00000288840 MTHFD1LQ6UB35 978 aa16.34■□□□□ 0.21
SMAD6-201ENST00000288840 LCLAT1Q6UWP7 414 aa16.34■□□□□ 0.21
SMAD6-201ENST00000288840 C10orf107Q8IVU9 208 aa16.34■□□□□ 0.21
SMAD6-201ENST00000288840 WDR60Q8WVS4 1066 aa16.34■□□□□ 0.21
SMAD6-201ENST00000288840 P2RY11Q96G91 374 aa16.34■□□□□ 0.21
SMAD6-201ENST00000288840 NACA2Q9H009 215 aa16.34■□□□□ 0.21
SMAD6-201ENST00000288840 CHST12Q9NRB3 414 aa16.34■□□□□ 0.21
SMAD6-201ENST00000288840 SYBUQ9NX95 663 aa16.34■□□□□ 0.21
SMAD6-201ENST00000288840 KIAA1257Q9ULG3 409 aa16.34■□□□□ 0.21
SMAD6-201ENST00000288840 BHMG1C9JSJ3 638 aaPredicted RBP16.34■□□□□ 0.21
SMAD6-201ENST00000288840 PDHXO00330 501 aa16.34■□□□□ 0.21
SMAD6-201ENST00000288840 PSMG1O95456 288 aa16.34■□□□□ 0.21
SMAD6-201ENST00000288840 FAM200BP0CF97 657 aa16.34■□□□□ 0.21
SMAD6-201ENST00000288840 PLK1P53350 603 aa16.34■□□□□ 0.21
SMAD6-201ENST00000288840 PITX1P78337 314 aaPredicted RBP16.34■□□□□ 0.21
SMAD6-201ENST00000288840 SH2D4BQ5SQS7 431 aa16.34■□□□□ 0.21
SMAD6-201ENST00000288840 C4orf50Q6ZRC1 276 aa16.34■□□□□ 0.21
SMAD6-201ENST00000288840 TDRPQ86YL5 185 aa16.34■□□□□ 0.21
SMAD6-201ENST00000288840 APBA2Q99767 749 aa16.34■□□□□ 0.21
SMAD6-201ENST00000288840 ULBP1Q9BZM6 244 aa16.34■□□□□ 0.21
SMAD6-201ENST00000288840 NMRK1Q9NWW6 199 aa16.34■□□□□ 0.21
SMAD6-201ENST00000288840 TAGLN3Q9UI15 199 aa16.34■□□□□ 0.21
SMAD6-201ENST00000288840 PLA2G4CQ9UP65 541 aa16.34■□□□□ 0.21
SMAD6-201ENST00000288840 PLLPQ9Y342 182 aa16.34■□□□□ 0.21
SMAD6-201ENST00000288840 PRRC2BQ5JSZ5 2229 aaKnown RBP16.34■□□□□ 0.21
SMAD6-201ENST00000288840 LTBP4Q8N2S1 1624 aa16.34■□□□□ 0.21
SMAD6-201ENST00000288840 MFSD11O43934 449 aa16.34■□□□□ 0.21
SMAD6-201ENST00000288840 SLC12A1Q13621 1099 aa16.34■□□□□ 0.21
SMAD6-201ENST00000288840 RPS6KA2Q15349 733 aa16.34■□□□□ 0.21
SMAD6-201ENST00000288840 ACSBG2Q5FVE4 666 aa16.34■□□□□ 0.21
SMAD6-201ENST00000288840 SLC27A1Q6PCB7 646 aa16.34■□□□□ 0.21
SMAD6-201ENST00000288840 PABPC5Q96DU9 382 aaKnown RBP16.34■□□□□ 0.21
SMAD6-201ENST00000288840 VPS33BQ9H267 617 aa16.34■□□□□ 0.21
SMAD6-201ENST00000288840 CXCL16Q9H2A7 254 aa16.34■□□□□ 0.21
SMAD6-201ENST00000288840 WDCPQ9H6R7 721 aa16.34■□□□□ 0.21
SMAD6-201ENST00000288840 ADARB2Q9NS39 739 aaKnown RBP16.34■□□□□ 0.21
SMAD6-201ENST00000288840 PEX11AO75192 247 aa16.33■□□□□ 0.21
SMAD6-201ENST00000288840 ATG7O95352 703 aa16.33■□□□□ 0.21
SMAD6-201ENST00000288840 TPBGLP0DKB5 382 aa16.33■□□□□ 0.21
SMAD6-201ENST00000288840 SPRP35270 261 aaPredicted RBP16.33■□□□□ 0.21
SMAD6-201ENST00000288840 GALNTL6Q49A17 601 aa16.33■□□□□ 0.21
SMAD6-201ENST00000288840 GPC2Q8N158 579 aa16.33■□□□□ 0.21
SMAD6-201ENST00000288840 TTC39CQ8N584 583 aa16.33■□□□□ 0.21
SMAD6-201ENST00000288840 DENND1AQ8TEH3 1009 aa16.33■□□□□ 0.21
SMAD6-201ENST00000288840 HDAC11Q96DB2 347 aa16.33■□□□□ 0.21
SMAD6-201ENST00000288840 MCRS1Q96EZ8 462 aa16.33■□□□□ 0.21
SMAD6-201ENST00000288840 C12orf42Q96LP6 360 aa16.33■□□□□ 0.21
SMAD6-201ENST00000288840 RNF39Q9H2S5 420 aa16.33■□□□□ 0.21
SMAD6-201ENST00000288840 MROH8Q9H579 483 aa16.33■□□□□ 0.21
SMAD6-201ENST00000288840 DDX43Q9NXZ2 648 aaKnown RBP16.33■□□□□ 0.21
SMAD6-201ENST00000288840 PRKAG3Q9UGI9 489 aa16.33■□□□□ 0.21
SMAD6-201ENST00000288840 TSPAN1O60635 241 aa16.33■□□□□ 0.2
SMAD6-201ENST00000288840 C22orf31O95567 290 aa16.33■□□□□ 0.2
SMAD6-201ENST00000288840 CA8P35219 290 aa16.33■□□□□ 0.2
SMAD6-201ENST00000288840 HDAC4P56524 1084 aa16.33■□□□□ 0.2
SMAD6-201ENST00000288840 SLC34A1Q06495 639 aa16.33■□□□□ 0.2
SMAD6-201ENST00000288840 WLSQ5T9L3 541 aa16.33■□□□□ 0.2
SMAD6-201ENST00000288840 RIPOR1Q6ZS17 1223 aa16.33■□□□□ 0.2
SMAD6-201ENST00000288840 FNIP1Q8TF40 1166 aa16.33■□□□□ 0.2
SMAD6-201ENST00000288840 LPPQ93052 612 aa16.33■□□□□ 0.2
SMAD6-201ENST00000288840 KCTD15Q96SI1 283 aaPredicted RBP16.33■□□□□ 0.2
SMAD6-201ENST00000288840 OMDQ99983 421 aa16.33■□□□□ 0.2
SMAD6-201ENST00000288840 FARP1Q9Y4F1 1045 aaPredicted RBP16.33■□□□□ 0.2
SMAD6-201ENST00000288840 MYH9P35579 1960 aaKnown RBP16.33■□□□□ 0.2
SMAD6-201ENST00000288840 A0A096LPK6 155 aa16.33■□□□□ 0.2
SMAD6-201ENST00000288840 SLC15A5A6NIM6 579 aa16.33■□□□□ 0.2
SMAD6-201ENST00000288840 CSPG5O95196 566 aa16.33■□□□□ 0.2
SMAD6-201ENST00000288840 CLDN10P78369 228 aa16.33■□□□□ 0.2
SMAD6-201ENST00000288840 ACVR2BQ13705 512 aa16.33■□□□□ 0.2
SMAD6-201ENST00000288840 TMPRSS6Q8IU80 811 aa16.33■□□□□ 0.2
SMAD6-201ENST00000288840 TEKT4Q8WW24 435 aa16.33■□□□□ 0.2
SMAD6-201ENST00000288840 CDHR5Q9HBB8 845 aa16.33■□□□□ 0.2
SMAD6-201ENST00000288840 SAR1AQ9NR31 198 aa16.33■□□□□ 0.2
SMAD6-201ENST00000288840 VANGL2Q9ULK5 521 aa16.33■□□□□ 0.2
SMAD6-201ENST00000288840 NHSQ6T4R5 1651 aa16.33■□□□□ 0.2
SMAD6-201ENST00000288840 GLRA3O75311 464 aa16.32■□□□□ 0.2
SMAD6-201ENST00000288840 POMCP01189 267 aa16.32■□□□□ 0.2
SMAD6-201ENST00000288840 MOGSQ13724 837 aa16.32■□□□□ 0.2
SMAD6-201ENST00000288840 WASHC2DQ5SRD0 308 aa16.32■□□□□ 0.2
SMAD6-201ENST00000288840 CERCAMQ5T4B2 595 aa16.32■□□□□ 0.2
SMAD6-201ENST00000288840 TP53INP2Q8IXH6 220 aa16.32■□□□□ 0.2
SMAD6-201ENST00000288840 UTP4Q969X6 686 aaKnown RBP16.32■□□□□ 0.2
SMAD6-201ENST00000288840 LRGUKQ96M69 825 aa16.32■□□□□ 0.2
SMAD6-201ENST00000288840 NUF2Q9BZD4 464 aa16.32■□□□□ 0.2
SMAD6-201ENST00000288840 PHACTR1Q9C0D0 580 aa16.32■□□□□ 0.2
SMAD6-201ENST00000288840 THAP1Q9NVV9 213 aa16.32■□□□□ 0.2
SMAD6-201ENST00000288840 GOLGA4Q13439 2230 aaKnown RBP16.32■□□□□ 0.2
SMAD6-201ENST00000288840 GOLGA8CPA6NN73 597 aa16.32■□□□□ 0.2
SMAD6-201ENST00000288840 NME5P56597 212 aa16.32■□□□□ 0.2
SMAD6-201ENST00000288840 ACAP1Q15027 740 aa16.32■□□□□ 0.2
SMAD6-201ENST00000288840 PDPK2PQ6A1A2 396 aa16.32■□□□□ 0.2
SMAD6-201ENST00000288840 SLC7A6OSQ96CW6 309 aaPredicted RBP16.32■□□□□ 0.2
SMAD6-201ENST00000288840 GAD1Q99259 594 aa16.32■□□□□ 0.2
SMAD6-201ENST00000288840 IL1RL2Q9HB29 575 aa16.32■□□□□ 0.2
SMAD6-201ENST00000288840 SLC4A7Q9Y6M7 1214 aa16.32■□□□□ 0.2
SMAD6-201ENST00000288840 HNRNPCL1O60812 293 aaKnown RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms