RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 HNRNPRO43390 633 aaKnown RBP18.98■□□□□ 0.63
PCDH1-201ENST00000287008 HSPA1AP0DMV8 641 aaKnown RBP18.98■□□□□ 0.63
PCDH1-201ENST00000287008 HSPA1BP0DMV9 641 aaKnown RBP18.98■□□□□ 0.63
PCDH1-201ENST00000287008 PTPN3P26045 913 aa18.98■□□□□ 0.63
PCDH1-201ENST00000287008 GRIK3Q13003 919 aa18.98■□□□□ 0.63
PCDH1-201ENST00000287008 ITGA9Q13797 1035 aa18.98■□□□□ 0.63
PCDH1-201ENST00000287008 SLC9A9Q8IVB4 645 aa18.98■□□□□ 0.63
PCDH1-201ENST00000287008 ZNF555Q8NEP9 628 aa18.98■□□□□ 0.63
PCDH1-201ENST00000287008 OR12D3Q9UGF7 316 aa18.98■□□□□ 0.63
PCDH1-201ENST00000287008 PCDHA3Q9Y5H8 950 aa18.98■□□□□ 0.63
PCDH1-201ENST00000287008 KRT87PA6NCN2 255 aa18.98■□□□□ 0.63
PCDH1-201ENST00000287008 HACD1B0YJ81 288 aa18.98■□□□□ 0.63
PCDH1-201ENST00000287008 NPY2RP49146 381 aa18.98■□□□□ 0.63
PCDH1-201ENST00000287008 DCLRE1AQ6PJP8 1040 aa18.98■□□□□ 0.63
PCDH1-201ENST00000287008 C16orf59Q7L2K0 433 aa18.98■□□□□ 0.63
PCDH1-201ENST00000287008 DTX3LQ8TDB6 740 aa18.98■□□□□ 0.63
PCDH1-201ENST00000287008 EPS8L3Q8TE67 593 aaKnown RBP18.98■□□□□ 0.63
PCDH1-201ENST00000287008 DNAJC19Q96DA6 116 aa18.98■□□□□ 0.63
PCDH1-201ENST00000287008 FUCA2Q9BTY2 467 aa18.98■□□□□ 0.63
PCDH1-201ENST00000287008 H2AFY2Q9P0M6 372 aaPredicted RBP18.98■□□□□ 0.63
PCDH1-201ENST00000287008 DNMT3LQ9UJW3 386 aa18.98■□□□□ 0.63
PCDH1-201ENST00000287008 GNG14A0A1W2PPG7 69 aa18.98■□□□□ 0.63
PCDH1-201ENST00000287008 TLL1O43897 1013 aa18.98■□□□□ 0.63
PCDH1-201ENST00000287008 ADRB2P07550 413 aa18.98■□□□□ 0.63
PCDH1-201ENST00000287008 MLNP12872 115 aa18.98■□□□□ 0.63
PCDH1-201ENST00000287008 GP5P40197 560 aa18.98■□□□□ 0.63
PCDH1-201ENST00000287008 MMP13P45452 471 aa18.98■□□□□ 0.63
PCDH1-201ENST00000287008 ACOX1Q15067 660 aa18.98■□□□□ 0.63
PCDH1-201ENST00000287008 PSMD5Q16401 504 aa18.98■□□□□ 0.63
PCDH1-201ENST00000287008 ZNF438Q7Z4V0 828 aa18.98■□□□□ 0.63
PCDH1-201ENST00000287008 BBS7Q8IWZ6 715 aa18.98■□□□□ 0.63
PCDH1-201ENST00000287008 VPS51Q9UID3 782 aa18.98■□□□□ 0.63
PCDH1-201ENST00000287008 SOX13Q9UN79 622 aa18.98■□□□□ 0.63
PCDH1-201ENST00000287008 FARP2O94887 1054 aaPredicted RBP18.98■□□□□ 0.63
PCDH1-201ENST00000287008 ZC3H12AQ5D1E8 599 aaKnown RBP18.98■□□□□ 0.63
PCDH1-201ENST00000287008 SPRYD7Q5W111 196 aa18.98■□□□□ 0.63
PCDH1-201ENST00000287008 YDJCA8MPS7 323 aa18.97■□□□□ 0.63
PCDH1-201ENST00000287008 CAPZA2P47755 286 aa18.97■□□□□ 0.63
PCDH1-201ENST00000287008 THOP1P52888 689 aa18.97■□□□□ 0.63
PCDH1-201ENST00000287008 BOP1Q14137 746 aaKnown RBP18.97■□□□□ 0.63
PCDH1-201ENST00000287008 ETNPPLQ8TBG4 499 aa18.97■□□□□ 0.63
PCDH1-201ENST00000287008 SEC16BQ96JE7 1060 aa18.97■□□□□ 0.63
PCDH1-201ENST00000287008 TAS2R13Q9NYV9 303 aa18.97■□□□□ 0.63
PCDH1-201ENST00000287008 APOC4-APOC2K7ER74 178 aa18.97■□□□□ 0.63
PCDH1-201ENST00000287008 APOC2P02655 101 aa18.97■□□□□ 0.63
PCDH1-201ENST00000287008 CPA3P15088 417 aa18.97■□□□□ 0.63
PCDH1-201ENST00000287008 GRK2P25098 689 aa18.97■□□□□ 0.63
PCDH1-201ENST00000287008 DLG4P78352 724 aa18.97■□□□□ 0.63
PCDH1-201ENST00000287008 LRRC52Q8N7C0 313 aa18.97■□□□□ 0.63
PCDH1-201ENST00000287008 MAN1C1Q9NR34 630 aa18.97■□□□□ 0.63
PCDH1-201ENST00000287008 GOLGA8TH3BQL2 631 aa18.97■□□□□ 0.63
PCDH1-201ENST00000287008 PJA2O43164 708 aa18.97■□□□□ 0.63
PCDH1-201ENST00000287008 KRT6AP02538 564 aa18.97■□□□□ 0.63
PCDH1-201ENST00000287008 KRT6BP04259 564 aa18.97■□□□□ 0.63
PCDH1-201ENST00000287008 PYGMP11217 842 aa18.97■□□□□ 0.63
PCDH1-201ENST00000287008 GRM5P41594 1212 aa18.97■□□□□ 0.63
PCDH1-201ENST00000287008 KRT6CP48668 564 aa18.97■□□□□ 0.63
PCDH1-201ENST00000287008 SEC24CP53992 1094 aa18.97■□□□□ 0.63
PCDH1-201ENST00000287008 GALNTL6Q49A17 601 aa18.97■□□□□ 0.63
PCDH1-201ENST00000287008 ADNPQ9H2P0 1102 aa18.97■□□□□ 0.63
PCDH1-201ENST00000287008 PRDM16Q9HAZ2 1276 aa18.97■□□□□ 0.63
PCDH1-201ENST00000287008 SMIM35A0A1B0GVV1 85 aa18.97■□□□□ 0.63
PCDH1-201ENST00000287008 FGF10O15520 208 aaPredicted RBP18.97■□□□□ 0.63
PCDH1-201ENST00000287008 GLT6D1Q7Z4J2 308 aa18.97■□□□□ 0.63
PCDH1-201ENST00000287008 ANKRD52Q8NB46 1076 aa18.97■□□□□ 0.63
PCDH1-201ENST00000287008 MDM1Q8TC05 714 aa18.97■□□□□ 0.63
PCDH1-201ENST00000287008 L2HGDHQ9H9P8 463 aa18.97■□□□□ 0.63
PCDH1-201ENST00000287008 USP2O75604 605 aaPredicted RBP18.96■□□□□ 0.63
PCDH1-201ENST00000287008 VAPBO95292 243 aa18.96■□□□□ 0.63
PCDH1-201ENST00000287008 LYPLA2O95372 231 aa18.96■□□□□ 0.63
PCDH1-201ENST00000287008 PDHA1P08559 390 aa18.96■□□□□ 0.63
PCDH1-201ENST00000287008 ELK3P41970 407 aa18.96■□□□□ 0.63
PCDH1-201ENST00000287008 ZACNQ401N2 412 aa18.96■□□□□ 0.63
PCDH1-201ENST00000287008 WDR93Q6P2C0 686 aa18.96■□□□□ 0.63
PCDH1-201ENST00000287008 HORMAD1Q86X24 394 aa18.96■□□□□ 0.63
PCDH1-201ENST00000287008 SLC44A2Q8IWA5 706 aaPredicted RBP18.96■□□□□ 0.63
PCDH1-201ENST00000287008 GLIS3Q8NEA6 775 aa18.96■□□□□ 0.63
PCDH1-201ENST00000287008 PANX3Q96QZ0 392 aa18.96■□□□□ 0.63
PCDH1-201ENST00000287008 OR56A5P0C7T3 313 aa18.96■□□□□ 0.63
PCDH1-201ENST00000287008 ARF4P18085 180 aaPredicted RBP18.96■□□□□ 0.63
PCDH1-201ENST00000287008 ITGB6P18564 788 aa18.96■□□□□ 0.63
PCDH1-201ENST00000287008 CYP2A7P20853 494 aa18.96■□□□□ 0.63
PCDH1-201ENST00000287008 PLIN5Q00G26 463 aa18.96■□□□□ 0.63
PCDH1-201ENST00000287008 OVGP1Q12889 678 aa18.96■□□□□ 0.63
PCDH1-201ENST00000287008 ITGB3BPQ13352 177 aaPredicted RBP18.96■□□□□ 0.63
PCDH1-201ENST00000287008 TUSC3Q13454 348 aa18.96■□□□□ 0.63
PCDH1-201ENST00000287008 MCOLN3Q8TDD5 553 aa18.96■□□□□ 0.63
PCDH1-201ENST00000287008 BLOC1S6Q9UL45 172 aa18.96■□□□□ 0.63
PCDH1-201ENST00000287008 ASTN2O75129 1339 aaPredicted RBP18.96■□□□□ 0.63
PCDH1-201ENST00000287008 SIGLEC16A6NMB1 481 aa18.96■□□□□ 0.63
PCDH1-201ENST00000287008 SEC24DO94855 1032 aaPredicted RBP18.96■□□□□ 0.63
PCDH1-201ENST00000287008 GJB1P08034 283 aa18.96■□□□□ 0.63
PCDH1-201ENST00000287008 COPAP53621 1224 aa18.96■□□□□ 0.63
PCDH1-201ENST00000287008 SEL1L3Q68CR1 1132 aa18.96■□□□□ 0.63
PCDH1-201ENST00000287008 ZNF470Q6ECI4 717 aa18.96■□□□□ 0.63
PCDH1-201ENST00000287008 ZNF614Q8N883 585 aa18.96■□□□□ 0.63
PCDH1-201ENST00000287008 RMND5AQ9H871 391 aa18.96■□□□□ 0.63
PCDH1-201ENST00000287008 PTCH2Q9Y6C5 1203 aa18.96■□□□□ 0.63
PCDH1-201ENST00000287008 CCDC85CA6NKD9 419 aa18.96■□□□□ 0.63
PCDH1-201ENST00000287008 SLCO1B7G3V0H7 640 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms