RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 SNAP91O60641 907 aa8.91□□□□□ -0.98
SCUBE3-201ENST00000274938 SEC24AO95486 1093 aa8.91□□□□□ -0.98
SCUBE3-201ENST00000274938 GTF2E2P29084 291 aaKnown RBP8.91□□□□□ -0.98
SCUBE3-201ENST00000274938 MKRN4PQ13434 485 aaPredicted RBP8.91□□□□□ -0.98
SCUBE3-201ENST00000274938 GNA13Q14344 377 aa8.91□□□□□ -0.98
SCUBE3-201ENST00000274938 DENND5AQ6IQ26 1287 aa8.91□□□□□ -0.98
SCUBE3-201ENST00000274938 SNX32Q86XE0 403 aa8.91□□□□□ -0.98
SCUBE3-201ENST00000274938 ZNF671Q8TAW3 534 aa8.91□□□□□ -0.98
SCUBE3-201ENST00000274938 TCP10LQ8TDR4 215 aa8.91□□□□□ -0.98
SCUBE3-201ENST00000274938 NSUN4Q96CB9 384 aaKnown RBP8.91□□□□□ -0.98
SCUBE3-201ENST00000274938 CGRRF1Q99675 332 aa8.91□□□□□ -0.98
SCUBE3-201ENST00000274938 TRDMT1O14717 391 aaKnown RBP8.91□□□□□ -0.98
SCUBE3-201ENST00000274938 ENTPD3O75355 529 aa8.91□□□□□ -0.98
SCUBE3-201ENST00000274938 PLEKP08567 350 aaPredicted RBP8.91□□□□□ -0.98
SCUBE3-201ENST00000274938 CYP2A7P20853 494 aa8.91□□□□□ -0.98
SCUBE3-201ENST00000274938 SLC26A3P40879 764 aa8.91□□□□□ -0.98
SCUBE3-201ENST00000274938 TRIM28Q13263 835 aaKnown RBP8.91□□□□□ -0.98
SCUBE3-201ENST00000274938 MTM1Q13496 603 aa8.91□□□□□ -0.98
SCUBE3-201ENST00000274938 HLFQ16534 295 aa8.91□□□□□ -0.98
SCUBE3-201ENST00000274938 RABL6Q3YEC7 729 aaPredicted RBP8.91□□□□□ -0.98
SCUBE3-201ENST00000274938 C5orf22Q49AR2 442 aa8.91□□□□□ -0.98
SCUBE3-201ENST00000274938 MFSD4BQ5TF39 518 aa8.91□□□□□ -0.98
SCUBE3-201ENST00000274938 ABRAXAS1Q6UWZ7 409 aa8.91□□□□□ -0.98
SCUBE3-201ENST00000274938 FAM126BQ8IXS8 530 aa8.91□□□□□ -0.98
SCUBE3-201ENST00000274938 IZUMO1Q8IYV9 350 aa8.91□□□□□ -0.98
SCUBE3-201ENST00000274938 CDRT15Q96T59 188 aa8.91□□□□□ -0.98
SCUBE3-201ENST00000274938 LRMDAQ9H2I8 198 aa8.91□□□□□ -0.98
SCUBE3-201ENST00000274938 REEP1Q9H902 201 aa8.91□□□□□ -0.98
SCUBE3-201ENST00000274938 ING3Q9NXR8 418 aa8.91□□□□□ -0.98
SCUBE3-201ENST00000274938 EURLQ9NYK6 297 aa8.91□□□□□ -0.98
SCUBE3-201ENST00000274938 CORO1CQ9ULV4 474 aaPredicted RBP8.91□□□□□ -0.98
SCUBE3-201ENST00000274938 TMCO1Q9UM00 188 aa8.91□□□□□ -0.98
SCUBE3-201ENST00000274938 AP4E1Q9UPM8 1137 aa8.91□□□□□ -0.98
SCUBE3-201ENST00000274938 GLI1P08151 1106 aa8.91□□□□□ -0.98
SCUBE3-201ENST00000274938 NOS3P29474 1203 aa8.91□□□□□ -0.98
SCUBE3-201ENST00000274938 C1QBPQ07021 282 aaKnown RBP8.91□□□□□ -0.98
SCUBE3-201ENST00000274938 ITGB3BPQ13352 177 aaPredicted RBP8.91□□□□□ -0.98
SCUBE3-201ENST00000274938 RNF43Q68DV7 783 aa8.91□□□□□ -0.98
SCUBE3-201ENST00000274938 FAM172AQ8WUF8 416 aa8.91□□□□□ -0.98
SCUBE3-201ENST00000274938 ZNF75CPQ92670 426 aaPredicted RBP8.91□□□□□ -0.98
SCUBE3-201ENST00000274938 RPRD1AQ96P16 312 aaPredicted RBP8.91□□□□□ -0.98
SCUBE3-201ENST00000274938 ADGRE3Q9BY15 652 aa8.91□□□□□ -0.98
SCUBE3-201ENST00000274938 RACGAP1Q9H0H5 632 aa8.91□□□□□ -0.98
SCUBE3-201ENST00000274938 CYP3A43Q9HB55 503 aa8.91□□□□□ -0.98
SCUBE3-201ENST00000274938 CCNB1IP1Q9NPC3 277 aa8.91□□□□□ -0.98
SCUBE3-201ENST00000274938 FBXO28Q9NVF7 368 aa8.91□□□□□ -0.98
SCUBE3-201ENST00000274938 VANGL2Q9ULK5 521 aa8.91□□□□□ -0.98
SCUBE3-201ENST00000274938 NLRP1Q9C000 1473 aa8.9□□□□□ -0.98
SCUBE3-201ENST00000274938 FAM196BA6NMK8 535 aa8.9□□□□□ -0.98
SCUBE3-201ENST00000274938 PGM3O95394 542 aa8.9□□□□□ -0.98
SCUBE3-201ENST00000274938 VAV1P15498 845 aa8.9□□□□□ -0.98
SCUBE3-201ENST00000274938 RCVRNP35243 200 aa8.9□□□□□ -0.98
SCUBE3-201ENST00000274938 GSTM5P46439 218 aa8.9□□□□□ -0.98
SCUBE3-201ENST00000274938 MGAT5BQ3V5L5 792 aa8.9□□□□□ -0.98
SCUBE3-201ENST00000274938 SCARA3Q6AZY7 606 aa8.9□□□□□ -0.98
SCUBE3-201ENST00000274938 FBXO39Q8N4B4 442 aa8.9□□□□□ -0.98
SCUBE3-201ENST00000274938 ZNF276Q8N554 614 aa8.9□□□□□ -0.98
SCUBE3-201ENST00000274938 FAM84BQ96KN1 310 aaPredicted RBP8.9□□□□□ -0.98
SCUBE3-201ENST00000274938 WDR12Q9GZL7 423 aaKnown RBP8.9□□□□□ -0.98
SCUBE3-201ENST00000274938 CMTM6Q9NX76 183 aa8.9□□□□□ -0.98
SCUBE3-201ENST00000274938 A0A087X1B8 175 aa8.9□□□□□ -0.98
SCUBE3-201ENST00000274938 OGTO15294 1046 aa8.9□□□□□ -0.98
SCUBE3-201ENST00000274938 IRF1P10914 325 aa8.9□□□□□ -0.98
SCUBE3-201ENST00000274938 TNFRSF8P28908 595 aa8.9□□□□□ -0.98
SCUBE3-201ENST00000274938 HNMTP50135 292 aa8.9□□□□□ -0.98
SCUBE3-201ENST00000274938 RENBPP51606 427 aa8.9□□□□□ -0.98
SCUBE3-201ENST00000274938 BCAT1P54687 386 aa8.9□□□□□ -0.98
SCUBE3-201ENST00000274938 TNK2Q07912 1038 aa8.9□□□□□ -0.98
SCUBE3-201ENST00000274938 BMPR2Q13873 1038 aa8.9□□□□□ -0.98
SCUBE3-201ENST00000274938 FBXW8Q8N3Y1 598 aa8.9□□□□□ -0.98
SCUBE3-201ENST00000274938 RNASE11Q8TAA1 199 aaKnown RBP8.9□□□□□ -0.98
SCUBE3-201ENST00000274938 AP3S1Q92572 193 aa8.9□□□□□ -0.98
SCUBE3-201ENST00000274938 LENG1Q96BZ8 264 aaPredicted RBP8.9□□□□□ -0.98
SCUBE3-201ENST00000274938 ACOX2Q99424 681 aa8.9□□□□□ -0.98
SCUBE3-201ENST00000274938 SEMA4AQ9H3S1 761 aa8.9□□□□□ -0.98
SCUBE3-201ENST00000274938 NINJ2Q9NZG7 142 aa8.9□□□□□ -0.98
SCUBE3-201ENST00000274938 A0A1W2PRG6 482 aa8.9□□□□□ -0.98
SCUBE3-201ENST00000274938 BTN3A3O00478 584 aa8.9□□□□□ -0.98
SCUBE3-201ENST00000274938 PRRG1O14668 218 aa8.9□□□□□ -0.98
SCUBE3-201ENST00000274938 NFICP08651 508 aa8.9□□□□□ -0.98
SCUBE3-201ENST00000274938 CYP2C9P11712 490 aa8.9□□□□□ -0.98
SCUBE3-201ENST00000274938 PCNAP12004 261 aa8.9□□□□□ -0.98
SCUBE3-201ENST00000274938 TSHRP16473 764 aa8.9□□□□□ -0.98
SCUBE3-201ENST00000274938 HIRAP54198 1017 aaPredicted RBP8.9□□□□□ -0.98
SCUBE3-201ENST00000274938 EPC2Q52LR7 807 aa8.9□□□□□ -0.98
SCUBE3-201ENST00000274938 ZNF554Q86TJ5 538 aa8.9□□□□□ -0.98
SCUBE3-201ENST00000274938 DEPDC4Q8N2C3 294 aa8.9□□□□□ -0.98
SCUBE3-201ENST00000274938 TCAIMQ8N3R3 496 aa8.9□□□□□ -0.98
SCUBE3-201ENST00000274938 ZNF614Q8N883 585 aa8.9□□□□□ -0.98
SCUBE3-201ENST00000274938 PNPLA3Q9NST1 481 aa8.9□□□□□ -0.98
SCUBE3-201ENST00000274938 DPP3Q9NY33 737 aa8.9□□□□□ -0.98
SCUBE3-201ENST00000274938 TRHDEQ9UKU6 1024 aa8.9□□□□□ -0.98
SCUBE3-201ENST00000274938 H3BN98 237 aa8.9□□□□□ -0.98
SCUBE3-201ENST00000274938 FDPSP14324 419 aaKnown RBP8.9□□□□□ -0.98
SCUBE3-201ENST00000274938 IL12AP29459 219 aa8.9□□□□□ -0.98
SCUBE3-201ENST00000274938 ACLYP53396 1101 aa8.9□□□□□ -0.98
SCUBE3-201ENST00000274938 BAATQ14032 418 aaPredicted RBP8.9□□□□□ -0.98
SCUBE3-201ENST00000274938 INTS11Q5TA45 600 aaKnown RBP8.9□□□□□ -0.98
SCUBE3-201ENST00000274938 MTSS1LQ765P7 747 aa8.9□□□□□ -0.98
SCUBE3-201ENST00000274938 MTIF3Q9H2K0 278 aaKnown RBP8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms