RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 C12orf50Q8NA57 414 aaPredicted RBP25.56■■□□□ 1.68
SSBP4-201ENST00000270061 MED10Q9BTT4 135 aa25.56■■□□□ 1.68
SSBP4-201ENST00000270061 SMG9Q9H0W8 520 aaKnown RBP25.56■■□□□ 1.68
SSBP4-201ENST00000270061 PIK3R2O00459 728 aa25.55■■□□□ 1.68
SSBP4-201ENST00000270061 RNF8O76064 485 aa25.55■■□□□ 1.68
SSBP4-201ENST00000270061 TCF4P15884 667 aa25.55■■□□□ 1.68
SSBP4-201ENST00000270061 CETN2P41208 172 aa25.55■■□□□ 1.68
SSBP4-201ENST00000270061 CACNA2D1P54289 1103 aa25.55■■□□□ 1.68
SSBP4-201ENST00000270061 MRPS25P82663 173 aaKnown RBP25.55■■□□□ 1.68
SSBP4-201ENST00000270061 SLC25A11Q02978 314 aaKnown RBP25.55■■□□□ 1.68
SSBP4-201ENST00000270061 ADAT2Q7Z6V5 191 aaKnown RBP25.55■■□□□ 1.68
SSBP4-201ENST00000270061 CCDC105Q8IYK2 499 aa25.55■■□□□ 1.68
SSBP4-201ENST00000270061 BPIFB1Q8TDL5 484 aa25.55■■□□□ 1.68
SSBP4-201ENST00000270061 RXFP2Q8WXD0 754 aa25.55■■□□□ 1.68
SSBP4-201ENST00000270061 PIWIL1Q96J94 861 aaKnown RBP25.55■■□□□ 1.68
SSBP4-201ENST00000270061 RUNDC3BQ96NL0 473 aa25.55■■□□□ 1.68
SSBP4-201ENST00000270061 LRRC3BQ96PB8 259 aa25.55■■□□□ 1.68
SSBP4-201ENST00000270061 TMEM30AQ9NV96 361 aa25.55■■□□□ 1.68
SSBP4-201ENST00000270061 HELZP42694 1942 aaKnown RBP25.54■■□□□ 1.68
SSBP4-201ENST00000270061 DCNP07585 359 aaKnown RBP25.54■■□□□ 1.68
SSBP4-201ENST00000270061 KRT7P08729 469 aa25.54■■□□□ 1.68
SSBP4-201ENST00000270061 RARAP10276 462 aa25.54■■□□□ 1.68
SSBP4-201ENST00000270061 CD72P21854 359 aa25.54■■□□□ 1.68
SSBP4-201ENST00000270061 PTPN7P35236 360 aa25.54■■□□□ 1.68
SSBP4-201ENST00000270061 USP46P62068 366 aa25.54■■□□□ 1.68
SSBP4-201ENST00000270061 DHX34Q14147 1143 aaKnown RBP25.54■■□□□ 1.68
SSBP4-201ENST00000270061 UBXN2BQ14CS0 331 aa25.54■■□□□ 1.68
SSBP4-201ENST00000270061 SLC26A9Q7LBE3 791 aa25.54■■□□□ 1.68
SSBP4-201ENST00000270061 FAM35AQ86V20 835 aa25.54■■□□□ 1.68
SSBP4-201ENST00000270061 PIGZQ86VD9 579 aa25.54■■□□□ 1.68
SSBP4-201ENST00000270061 EIF1ADQ8N9N8 165 aaKnown RBP25.54■■□□□ 1.68
SSBP4-201ENST00000270061 UBXN6Q9BZV1 441 aa25.54■■□□□ 1.68
SSBP4-201ENST00000270061 IRF2BPLQ9H1B7 796 aa25.54■■□□□ 1.68
SSBP4-201ENST00000270061 TRPC7Q9HCX4 862 aa25.54■■□□□ 1.68
SSBP4-201ENST00000270061 AMACRQ9UHK6 382 aa25.54■■□□□ 1.68
SSBP4-201ENST00000270061 TCRBV7S2A1N4TA0A589 114 aa25.54■■□□□ 1.68
SSBP4-201ENST00000270061 ARNTLO00327 626 aa25.54■■□□□ 1.68
SSBP4-201ENST00000270061 FAM200BP0CF97 657 aa25.54■■□□□ 1.68
SSBP4-201ENST00000270061 PDGFRAP16234 1089 aa25.54■■□□□ 1.68
SSBP4-201ENST00000270061 TRNP1Q6NT89 227 aa25.54■■□□□ 1.68
SSBP4-201ENST00000270061 ZNF852Q6ZMS4 543 aa25.54■■□□□ 1.68
SSBP4-201ENST00000270061 CLEC20AQ6ZU45 233 aa25.54■■□□□ 1.68
SSBP4-201ENST00000270061 DTWD2Q8NBA8 298 aa25.54■■□□□ 1.68
SSBP4-201ENST00000270061 CSGALNACT1Q8TDX6 532 aa25.54■■□□□ 1.68
SSBP4-201ENST00000270061 SMARCD1Q96GM5 515 aa25.54■■□□□ 1.68
SSBP4-201ENST00000270061 NCAPGQ9BPX3 1015 aa25.54■■□□□ 1.68
SSBP4-201ENST00000270061 LRRC19Q9H756 370 aa25.54■■□□□ 1.68
SSBP4-201ENST00000270061 TDP1Q9NUW8 608 aa25.54■■□□□ 1.68
SSBP4-201ENST00000270061 PCYOX1Q9UHG3 505 aa25.54■■□□□ 1.68
SSBP4-201ENST00000270061 FLT3P36888 993 aa25.53■■□□□ 1.68
SSBP4-201ENST00000270061 KLF1Q13351 362 aaPredicted RBP25.53■■□□□ 1.68
SSBP4-201ENST00000270061 TTLL2Q9BWV7 592 aa25.53■■□□□ 1.68
SSBP4-201ENST00000270061 OSBPL8Q9BZF1 889 aa25.53■■□□□ 1.68
SSBP4-201ENST00000270061 LTB4R2Q9NPC1 389 aa25.53■■□□□ 1.68
SSBP4-201ENST00000270061 CCL26Q9Y258 94 aa25.53■■□□□ 1.68
SSBP4-201ENST00000270061 DMDP11532 3685 aa25.53■■□□□ 1.68
SSBP4-201ENST00000270061 FAM187AA6NFU0 413 aa25.52■■□□□ 1.68
SSBP4-201ENST00000270061 H0Y858 1186 aa25.52■■□□□ 1.68
SSBP4-201ENST00000270061 SEC31AO94979 1220 aaKnown RBP25.52■■□□□ 1.68
SSBP4-201ENST00000270061 GUCY2DQ02846 1103 aa25.52■■□□□ 1.68
SSBP4-201ENST00000270061 ATP13A4Q4VNC1 1196 aa25.52■■□□□ 1.68
SSBP4-201ENST00000270061 CCDC50Q8IVM0 306 aa25.52■■□□□ 1.68
SSBP4-201ENST00000270061 USP13Q92995 863 aaPredicted RBP25.52■■□□□ 1.68
SSBP4-201ENST00000270061 MAGOHBQ96A72 148 aaKnown RBP25.52■■□□□ 1.68
SSBP4-201ENST00000270061 SLITRK1Q96PX8 696 aa25.52■■□□□ 1.68
SSBP4-201ENST00000270061 KCNK16Q96T55 309 aa25.52■■□□□ 1.68
SSBP4-201ENST00000270061 NELL2Q99435 816 aa25.52■■□□□ 1.68
SSBP4-201ENST00000270061 OSBPL6Q9BZF3 934 aa25.52■■□□□ 1.68
SSBP4-201ENST00000270061 KIF9Q9HAQ2 790 aa25.52■■□□□ 1.68
SSBP4-201ENST00000270061 EPB41L5Q9HCM4 733 aa25.52■■□□□ 1.68
SSBP4-201ENST00000270061 DMAP1Q9NPF5 467 aaPredicted RBP25.52■■□□□ 1.68
SSBP4-201ENST00000270061 THG1LQ9NWX6 298 aaKnown RBP25.52■■□□□ 1.68
SSBP4-201ENST00000270061 TRPM5Q9NZQ8 1165 aa25.52■■□□□ 1.68
SSBP4-201ENST00000270061 MRPS17Q9Y2R5 130 aaKnown RBP25.52■■□□□ 1.68
SSBP4-201ENST00000270061 PIAS3Q9Y6X2 628 aa25.52■■□□□ 1.68
SSBP4-201ENST00000270061 TRAV19A0A0A6YYK7 116 aa25.51■■□□□ 1.67
SSBP4-201ENST00000270061 FAM170BA6NMN3 283 aa25.51■■□□□ 1.67
SSBP4-201ENST00000270061 MAN2B1O00754 1011 aa25.51■■□□□ 1.67
SSBP4-201ENST00000270061 RALAP11233 206 aa25.51■■□□□ 1.67
SSBP4-201ENST00000270061 FNTAP49354 379 aa25.51■■□□□ 1.67
SSBP4-201ENST00000270061 CCDC14Q49A88 953 aa25.51■■□□□ 1.67
SSBP4-201ENST00000270061 TXNRD3NBQ6F5E7 133 aa25.51■■□□□ 1.67
SSBP4-201ENST00000270061 NUP93Q8N1F7 819 aa25.51■■□□□ 1.67
SSBP4-201ENST00000270061 SEC14L1Q92503 715 aa25.51■■□□□ 1.67
SSBP4-201ENST00000270061 ZFYVE19Q96K21 471 aa25.51■■□□□ 1.67
SSBP4-201ENST00000270061 KRT82Q9NSB4 513 aa25.51■■□□□ 1.67
SSBP4-201ENST00000270061 HOMER3Q9NSC5 361 aa25.51■■□□□ 1.67
SSBP4-201ENST00000270061 AP1G2O75843 785 aa25.51■■□□□ 1.67
SSBP4-201ENST00000270061 BEST1O76090 585 aa25.51■■□□□ 1.67
SSBP4-201ENST00000270061 KRT1P04264 644 aa25.51■■□□□ 1.67
SSBP4-201ENST00000270061 CKMP06732 381 aa25.51■■□□□ 1.67
SSBP4-201ENST00000270061 LCP1P13796 627 aa25.51■■□□□ 1.67
SSBP4-201ENST00000270061 MIPP30301 263 aa25.51■■□□□ 1.67
SSBP4-201ENST00000270061 GJC1P36383 396 aa25.51■■□□□ 1.67
SSBP4-201ENST00000270061 IFRD2Q12894 506 aaPredicted RBP25.51■■□□□ 1.67
SSBP4-201ENST00000270061 TAF5Q15542 800 aa25.51■■□□□ 1.67
SSBP4-201ENST00000270061 EFHC1Q5JVL4 640 aa25.51■■□□□ 1.67
SSBP4-201ENST00000270061 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP25.51■■□□□ 1.671e-6■■■■■ 52.4
SSBP4-201ENST00000270061 DLGAP2Q9P1A6 1054 aa25.51■■□□□ 1.67
SSBP4-201ENST00000270061 EFR3BQ9Y2G0 817 aa25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms