RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 CUL9Q8IWT3 2517 aa15.89■□□□□ 0.13
COPS3-201ENST00000268717 IRAK2O43187 625 aa15.88■□□□□ 0.13
COPS3-201ENST00000268717 HAPLN1P10915 354 aaPredicted RBP15.88■□□□□ 0.13
COPS3-201ENST00000268717 GOT1P17174 413 aa15.88■□□□□ 0.13
COPS3-201ENST00000268717 PBX3P40426 434 aa15.88■□□□□ 0.13
COPS3-201ENST00000268717 RPL10AP62906 217 aaKnown RBP15.88■□□□□ 0.13
COPS3-201ENST00000268717 CAMK1Q14012 370 aa15.88■□□□□ 0.13
COPS3-201ENST00000268717 DPYSQ14117 519 aa15.88■□□□□ 0.13
COPS3-201ENST00000268717 RNASEH2BQ5TBB1 312 aaKnown RBP15.88■□□□□ 0.13
COPS3-201ENST00000268717 NCBP2-AS2Q69YL0 99 aa15.88■□□□□ 0.13
COPS3-201ENST00000268717 DARS2Q6PI48 645 aaKnown RBP15.88■□□□□ 0.13
COPS3-201ENST00000268717 NPNTQ6UXI9 565 aa15.88■□□□□ 0.13
COPS3-201ENST00000268717 SCD5Q86SK9 330 aa15.88■□□□□ 0.13
COPS3-201ENST00000268717 CROCCP2Q86T23 111 aa15.88■□□□□ 0.13
COPS3-201ENST00000268717 GPR65Q8IYL9 337 aa15.88■□□□□ 0.13
COPS3-201ENST00000268717 GLIS1Q8NBF1 620 aa15.88■□□□□ 0.13
COPS3-201ENST00000268717 SPPL3Q8TCT6 385 aa15.88■□□□□ 0.13
COPS3-201ENST00000268717 UBLCP1Q8WVY7 318 aaPredicted RBP15.88■□□□□ 0.13
COPS3-201ENST00000268717 EDEM1Q92611 657 aa15.88■□□□□ 0.13
COPS3-201ENST00000268717 B3GALT6Q96L58 329 aa15.88■□□□□ 0.13
COPS3-201ENST00000268717 ZNF558Q96NG5 402 aa15.88■□□□□ 0.13
COPS3-201ENST00000268717 OLFM3Q96PB7 478 aa15.88■□□□□ 0.13
COPS3-201ENST00000268717 OSBPL2Q9H1P3 480 aa15.88■□□□□ 0.13
COPS3-201ENST00000268717 WDCPQ9H6R7 721 aa15.88■□□□□ 0.13
COPS3-201ENST00000268717 ARHGEF38Q9NXL2 777 aa15.88■□□□□ 0.13
COPS3-201ENST00000268717 FARP1Q9Y4F1 1045 aaPredicted RBP15.88■□□□□ 0.13
COPS3-201ENST00000268717 H7C0C1 242 aa15.87■□□□□ 0.13
COPS3-201ENST00000268717 RNF40O75150 1001 aa15.87■□□□□ 0.13
COPS3-201ENST00000268717 IFNB1P01574 187 aa15.87■□□□□ 0.13
COPS3-201ENST00000268717 SOD2P04179 222 aa15.87■□□□□ 0.13
COPS3-201ENST00000268717 ATP5OP48047 213 aa15.87■□□□□ 0.13
COPS3-201ENST00000268717 VPS41P49754 854 aa15.87■□□□□ 0.13
COPS3-201ENST00000268717 GDF10P55107 478 aa15.87■□□□□ 0.13
COPS3-201ENST00000268717 CBX1P83916 185 aa15.87■□□□□ 0.13
COPS3-201ENST00000268717 PPP2R5DQ14738 602 aa15.87■□□□□ 0.13
COPS3-201ENST00000268717 PAFAH1B3Q15102 231 aaKnown RBP15.87■□□□□ 0.13
COPS3-201ENST00000268717 C1orf228Q6PIY5 440 aa15.87■□□□□ 0.13
COPS3-201ENST00000268717 KCNT2Q6UVM3 1135 aa15.87■□□□□ 0.13
COPS3-201ENST00000268717 DENND5BQ6ZUT9 1274 aa15.87■□□□□ 0.13
COPS3-201ENST00000268717 RFX8Q6ZV50 586 aa15.87■□□□□ 0.13
COPS3-201ENST00000268717 UNC45BQ8IWX7 931 aa15.87■□□□□ 0.13
COPS3-201ENST00000268717 SLC39A11Q8N1S5 342 aa15.87■□□□□ 0.13
COPS3-201ENST00000268717 ATAD1Q8NBU5 361 aa15.87■□□□□ 0.13
COPS3-201ENST00000268717 SERPINB11Q96P15 392 aa15.87■□□□□ 0.13
COPS3-201ENST00000268717 QKIQ96PU8 341 aaKnown RBP eCLIP15.87■□□□□ 0.13
COPS3-201ENST00000268717 HAPLN3Q96S86 360 aa15.87■□□□□ 0.13
COPS3-201ENST00000268717 EPAS1Q99814 870 aa15.87■□□□□ 0.13
COPS3-201ENST00000268717 HERC2P3Q9BVR0 1158 aa15.87■□□□□ 0.13
COPS3-201ENST00000268717 EPB41L4BQ9H329 900 aa15.87■□□□□ 0.13
COPS3-201ENST00000268717 NSUN3Q9H649 340 aaKnown RBP15.87■□□□□ 0.13
COPS3-201ENST00000268717 USP29Q9HBJ7 922 aa15.87■□□□□ 0.13
COPS3-201ENST00000268717 CLIC5Q9NZA1 410 aa15.87■□□□□ 0.13
COPS3-201ENST00000268717 PAK5Q9P286 719 aa15.87■□□□□ 0.13
COPS3-201ENST00000268717 NCOR1O75376 2440 aa15.87■□□□□ 0.13
COPS3-201ENST00000268717 SYNJ2BP-COX16A0A087WUM0 186 aa15.86■□□□□ 0.13
COPS3-201ENST00000268717 EEF2KO00418 725 aaKnown RBP15.86■□□□□ 0.13
COPS3-201ENST00000268717 FGF18O76093 207 aa15.86■□□□□ 0.13
COPS3-201ENST00000268717 DNAJB1P25685 340 aa15.86■□□□□ 0.13
COPS3-201ENST00000268717 ACTN2P35609 894 aa15.86■□□□□ 0.13
COPS3-201ENST00000268717 CBLBQ13191 982 aa15.86■□□□□ 0.13
COPS3-201ENST00000268717 PSMD5Q16401 504 aa15.86■□□□□ 0.13
COPS3-201ENST00000268717 DDR2Q16832 855 aa15.86■□□□□ 0.13
COPS3-201ENST00000268717 SLC45A4Q5BKX6 768 aa15.86■□□□□ 0.13
COPS3-201ENST00000268717 DENND2CQ68D51 928 aa15.86■□□□□ 0.13
COPS3-201ENST00000268717 RSPO2Q6UXX9 243 aaPredicted RBP15.86■□□□□ 0.13
COPS3-201ENST00000268717 PDZD4Q76G19 769 aaPredicted RBP15.86■□□□□ 0.13
COPS3-201ENST00000268717 TAS1R1Q7RTX1 841 aa15.86■□□□□ 0.13
COPS3-201ENST00000268717 PPIL6Q8IXY8 311 aa15.86■□□□□ 0.13
COPS3-201ENST00000268717 PYROXD2Q8N2H3 581 aa15.86■□□□□ 0.13
COPS3-201ENST00000268717 ADAM32Q8TC27 787 aa15.86■□□□□ 0.13
COPS3-201ENST00000268717 POF1BQ8WVV4 589 aa15.86■□□□□ 0.13
COPS3-201ENST00000268717 ATXN2LQ8WWM7 1075 aaKnown RBP15.86■□□□□ 0.13
COPS3-201ENST00000268717 TMEM109Q9BVC6 243 aa15.86■□□□□ 0.13
COPS3-201ENST00000268717 DTLQ9NZJ0 730 aa15.86■□□□□ 0.13
COPS3-201ENST00000268717 COX16Q9P0S2 106 aa15.86■□□□□ 0.13
COPS3-201ENST00000268717 HEY1Q9Y5J3 304 aa15.86■□□□□ 0.13
COPS3-201ENST00000268717 TTC28Q96AY4 2481 aa15.86■□□□□ 0.13
COPS3-201ENST00000268717 DCLK1O15075 740 aa15.86■□□□□ 0.13
COPS3-201ENST00000268717 VNN2O95498 520 aa15.86■□□□□ 0.13
COPS3-201ENST00000268717 ZSCAN5DPP0CG00 497 aa15.86■□□□□ 0.13
COPS3-201ENST00000268717 YWHAQP27348 245 aa15.86■□□□□ 0.13
COPS3-201ENST00000268717 CCR1P32246 355 aa15.86■□□□□ 0.13
COPS3-201ENST00000268717 RPL22P35268 128 aaKnown RBP15.86■□□□□ 0.13
COPS3-201ENST00000268717 FAM193AP78312 1265 aa15.86■□□□□ 0.13
COPS3-201ENST00000268717 DSG1Q02413 1049 aa15.86■□□□□ 0.13
COPS3-201ENST00000268717 GBE1Q04446 702 aa15.86■□□□□ 0.13
COPS3-201ENST00000268717 UBE3AQ05086 875 aa15.86■□□□□ 0.13
COPS3-201ENST00000268717 TCEAL5Q5H9L2 206 aa15.86■□□□□ 0.13
COPS3-201ENST00000268717 RNF19BQ6ZMZ0 732 aa15.86■□□□□ 0.13
COPS3-201ENST00000268717 ZC3H18Q86VM9 953 aaKnown RBP15.86■□□□□ 0.13
COPS3-201ENST00000268717 FAM71DQ8N9W8 422 aa15.86■□□□□ 0.13
COPS3-201ENST00000268717 PGLYRP2Q96PD5 576 aa15.86■□□□□ 0.13
COPS3-201ENST00000268717 TTLL2Q9BWV7 592 aa15.86■□□□□ 0.13
COPS3-201ENST00000268717 VN1R3Q9BXE9 311 aa15.86■□□□□ 0.13
COPS3-201ENST00000268717 BRD8Q9H0E9 1235 aa15.86■□□□□ 0.13
COPS3-201ENST00000268717 TKTL2Q9H0I9 626 aa15.86■□□□□ 0.13
COPS3-201ENST00000268717 OLA1Q9NTK5 396 aaKnown RBP15.86■□□□□ 0.13
COPS3-201ENST00000268717 CDY1Q9Y6F8 540 aa15.86■□□□□ 0.13
COPS3-201ENST00000268717 PLXNA3P51805 1871 aa15.85■□□□□ 0.13
COPS3-201ENST00000268717 A0A1W2PQH9 124 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms