RNA–Protein interactions for RNA: ENST00000267260.4

SRRM4-201, Transcript of serine/arginine repetitive matrix 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRM4, Length 8,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-201ENST00000267260 CPT1AP50416 773 aa12.37□□□□□ -0.43
SRRM4-201ENST00000267260 NR6A1Q15406 480 aa12.37□□□□□ -0.43
SRRM4-201ENST00000267260 HIST3H2AQ7L7L0 130 aa12.37□□□□□ -0.43
SRRM4-201ENST00000267260 HERC6Q8IVU3 1022 aa12.37□□□□□ -0.43
SRRM4-201ENST00000267260 SYTL5Q8TDW5 730 aaPredicted RBP12.37□□□□□ -0.43
SRRM4-201ENST00000267260 USP7Q93009 1102 aa12.37□□□□□ -0.43
SRRM4-201ENST00000267260 HIST1H2ACQ93077 130 aa12.37□□□□□ -0.43
SRRM4-201ENST00000267260 TCF7L2Q9NQB0 619 aa12.37□□□□□ -0.43
SRRM4-201ENST00000267260 TBC1D13Q9NVG8 400 aa12.37□□□□□ -0.43
SRRM4-201ENST00000267260 IQGAP3Q86VI3 1631 aa12.37□□□□□ -0.43
SRRM4-201ENST00000267260 PALLDQ8WX93 1383 aa12.37□□□□□ -0.43
SRRM4-201ENST00000267260 AP3D1O14617 1153 aa12.37□□□□□ -0.43
SRRM4-201ENST00000267260 LRG1P02750 347 aa12.37□□□□□ -0.43
SRRM4-201ENST00000267260 RARGP13631 454 aa12.37□□□□□ -0.43
SRRM4-201ENST00000267260 PTGS2P35354 604 aa12.37□□□□□ -0.43
SRRM4-201ENST00000267260 CHN2P52757 468 aa12.37□□□□□ -0.43
SRRM4-201ENST00000267260 GRSF1Q12849 480 aaKnown RBP eCLIP12.37□□□□□ -0.43
SRRM4-201ENST00000267260 MTF1Q14872 753 aa12.37□□□□□ -0.43
SRRM4-201ENST00000267260 GRTP1Q5TC63 336 aa12.37□□□□□ -0.43
SRRM4-201ENST00000267260 SHC4Q6S5L8 630 aa12.37□□□□□ -0.43
SRRM4-201ENST00000267260 MSANTD1Q6ZTZ1 278 aa12.37□□□□□ -0.43
SRRM4-201ENST00000267260 ZNF554Q86TJ5 538 aa12.37□□□□□ -0.43
SRRM4-201ENST00000267260 PHACTR4Q8IZ21 702 aa12.37□□□□□ -0.43
SRRM4-201ENST00000267260 KCNB2Q92953 911 aa12.37□□□□□ -0.43
SRRM4-201ENST00000267260 F5H6K3 240 aa12.37□□□□□ -0.43
SRRM4-201ENST00000267260 PLOD3O60568 738 aa12.37□□□□□ -0.43
SRRM4-201ENST00000267260 AP1G2O75843 785 aa12.37□□□□□ -0.43
SRRM4-201ENST00000267260 ATP4AP20648 1035 aa12.37□□□□□ -0.43
SRRM4-201ENST00000267260 FAUP35544 74 aaKnown RBP12.37□□□□□ -0.43
SRRM4-201ENST00000267260 RFX3P48380 749 aa12.37□□□□□ -0.43
SRRM4-201ENST00000267260 ROR2Q01974 943 aaKnown RBP12.37□□□□□ -0.43
SRRM4-201ENST00000267260 KLRC3Q07444 240 aa12.37□□□□□ -0.43
SRRM4-201ENST00000267260 CAMK1Q14012 370 aa12.37□□□□□ -0.43
SRRM4-201ENST00000267260 AGKQ53H12 422 aa12.37□□□□□ -0.43
SRRM4-201ENST00000267260 C8orf59Q8N0T1 100 aaPredicted RBP12.37□□□□□ -0.43
SRRM4-201ENST00000267260 POC5Q8NA72 575 aa12.37□□□□□ -0.43
SRRM4-201ENST00000267260 MAGEC3Q8TD91 643 aa12.37□□□□□ -0.43
SRRM4-201ENST00000267260 PIH1D3Q9NQM4 214 aaKnown RBP12.37□□□□□ -0.43
SRRM4-201ENST00000267260 A0A088AWK7 358 aa12.37□□□□□ -0.43
SRRM4-201ENST00000267260 RRN3P2A6NIE6 340 aa12.37□□□□□ -0.43
SRRM4-201ENST00000267260 F9P00740 461 aa12.37□□□□□ -0.43
SRRM4-201ENST00000267260 ZNF10P21506 573 aaPredicted RBP12.37□□□□□ -0.43
SRRM4-201ENST00000267260 DHRSXQ8N5I4 330 aa12.37□□□□□ -0.43
SRRM4-201ENST00000267260 REEP2Q9BRK0 252 aa12.37□□□□□ -0.43
SRRM4-201ENST00000267260 ASAP1Q9ULH1 1129 aa12.37□□□□□ -0.43
SRRM4-201ENST00000267260 VANGL2Q9ULK5 521 aa12.37□□□□□ -0.43
SRRM4-201ENST00000267260 COMMD3-BMI1R4GMX3 469 aa12.37□□□□□ -0.43
SRRM4-201ENST00000267260 STX16-NPEPL1H3BU86 382 aa12.37□□□□□ -0.43
SRRM4-201ENST00000267260 STX16O14662 325 aa12.37□□□□□ -0.43
SRRM4-201ENST00000267260 INPP4BO15327 924 aa12.37□□□□□ -0.43
SRRM4-201ENST00000267260 IL12AP29459 219 aa12.37□□□□□ -0.43
SRRM4-201ENST00000267260 MGAT5BQ3V5L5 792 aa12.37□□□□□ -0.43
SRRM4-201ENST00000267260 ZNF772Q68DY9 489 aaPredicted RBP12.37□□□□□ -0.43
SRRM4-201ENST00000267260 PYHIN1Q6K0P9 492 aa12.37□□□□□ -0.43
SRRM4-201ENST00000267260 PLEKHG4BQ96PX9 1271 aa12.37□□□□□ -0.43
SRRM4-201ENST00000267260 GORASP1Q9BQQ3 440 aa12.37□□□□□ -0.43
SRRM4-201ENST00000267260 CHCHD6Q9BRQ6 235 aa12.37□□□□□ -0.43
SRRM4-201ENST00000267260 NAGPAQ9UK23 515 aa12.37□□□□□ -0.43
SRRM4-201ENST00000267260 LRRC14BA6NHZ5 514 aa12.36□□□□□ -0.43
SRRM4-201ENST00000267260 FGRP09769 529 aa12.36□□□□□ -0.43
SRRM4-201ENST00000267260 RAG1P15918 1043 aa12.36□□□□□ -0.43
SRRM4-201ENST00000267260 PTGES3Q15185 160 aaKnown RBP12.36□□□□□ -0.43
SRRM4-201ENST00000267260 SKIV2LQ15477 1246 aaKnown RBP12.36□□□□□ -0.43
SRRM4-201ENST00000267260 UBE2Q1Q7Z7E8 422 aa12.36□□□□□ -0.43
SRRM4-201ENST00000267260 DGCR6LQ9BY27 220 aa12.36□□□□□ -0.43
SRRM4-201ENST00000267260 L1RE1Q9UN81 338 aa12.36□□□□□ -0.43
SRRM4-201ENST00000267260 A2ML1A8K2U0 1454 aa12.36□□□□□ -0.43
SRRM4-201ENST00000267260 PRKAA1Q13131 559 aa12.36□□□□□ -0.43
SRRM4-201ENST00000267260 QRICH1Q2TAL8 776 aa12.36□□□□□ -0.43
SRRM4-201ENST00000267260 TCHHL1Q5QJ38 904 aaPredicted RBP12.36□□□□□ -0.43
SRRM4-201ENST00000267260 SLFN11Q7Z7L1 901 aa12.36□□□□□ -0.43
SRRM4-201ENST00000267260 TRMT2AQ8IZ69 625 aaKnown RBP12.36□□□□□ -0.43
SRRM4-201ENST00000267260 MED8Q96G25 268 aa12.36□□□□□ -0.43
SRRM4-201ENST00000267260 FAM49BQ9NUQ9 324 aa12.36□□□□□ -0.43
SRRM4-201ENST00000267260 NDUFAF1Q9Y375 327 aa12.36□□□□□ -0.43
SRRM4-201ENST00000267260 AFF2P51816 1311 aa12.36□□□□□ -0.43
SRRM4-201ENST00000267260 MDM4O15151 490 aa12.36□□□□□ -0.43
SRRM4-201ENST00000267260 UBDO15205 165 aa12.36□□□□□ -0.43
SRRM4-201ENST00000267260 FARP2O94887 1054 aaPredicted RBP12.36□□□□□ -0.43
SRRM4-201ENST00000267260 BROXQ5VW32 411 aa12.36□□□□□ -0.43
SRRM4-201ENST00000267260 MYDGFQ969H8 173 aa12.36□□□□□ -0.43
SRRM4-201ENST00000267260 CITED4Q96RK1 184 aa12.36□□□□□ -0.43
SRRM4-201ENST00000267260 CHST12Q9NRB3 414 aa12.36□□□□□ -0.43
SRRM4-201ENST00000267260 ABCB10Q9NRK6 738 aa12.36□□□□□ -0.43
SRRM4-201ENST00000267260 CLN6Q9NWW5 311 aa12.36□□□□□ -0.43
SRRM4-201ENST00000267260 NUDT5Q9UKK9 219 aa12.36□□□□□ -0.43
SRRM4-201ENST00000267260 METP08581 1390 aa12.36□□□□□ -0.43
SRRM4-201ENST00000267260 AXIN1O15169 862 aa12.36□□□□□ -0.43
SRRM4-201ENST00000267260 ARF3P61204 181 aaPredicted RBP12.36□□□□□ -0.43
SRRM4-201ENST00000267260 ARF1P84077 181 aaKnown RBP12.36□□□□□ -0.43
SRRM4-201ENST00000267260 SLC15A2Q16348 729 aa12.36□□□□□ -0.43
SRRM4-201ENST00000267260 XRRA1Q6P2D8 792 aa12.36□□□□□ -0.43
SRRM4-201ENST00000267260 MTSS1LQ765P7 747 aa12.36□□□□□ -0.43
SRRM4-201ENST00000267260 POLNQ7Z5Q5 900 aa12.36□□□□□ -0.43
SRRM4-201ENST00000267260 RAET1EQ8TD07 263 aa12.36□□□□□ -0.43
SRRM4-201ENST00000267260 SEPHS2Q99611 448 aa12.36□□□□□ -0.43
SRRM4-201ENST00000267260 TIMMDC1Q9NPL8 285 aa12.36□□□□□ -0.43
SRRM4-201ENST00000267260 TMEM260Q9NX78 707 aa12.36□□□□□ -0.43
SRRM4-201ENST00000267260 UBP1Q9NZI7 540 aa12.36□□□□□ -0.43
SRRM4-201ENST00000267260 RECQL5O94762 991 aaPredicted RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms