RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 MPPE1Q53F39 396 aa10.14□□□□□ -0.79
VPS41-201ENST00000265745 SLC23A3Q6PIS1 610 aa10.14□□□□□ -0.79
VPS41-201ENST00000265745 ANKS1BQ7Z6G8 1248 aa10.14□□□□□ -0.79
VPS41-201ENST00000265745 SLC41A1Q8IVJ1 513 aa10.14□□□□□ -0.79
VPS41-201ENST00000265745 SCUBE3Q8IX30 993 aa10.14□□□□□ -0.79
VPS41-201ENST00000265745 TRIML1Q8N9V2 468 aa10.14□□□□□ -0.79
VPS41-201ENST00000265745 EPS8L1Q8TE68 723 aa10.14□□□□□ -0.79
VPS41-201ENST00000265745 UCMAQ8WVF2 138 aa10.14□□□□□ -0.79
VPS41-201ENST00000265745 SORCS1Q8WY21 1168 aa10.14□□□□□ -0.79
VPS41-201ENST00000265745 ZNF419Q96HQ0 510 aaPredicted RBP10.14□□□□□ -0.79
VPS41-201ENST00000265745 NUSAP1Q9BXS6 441 aaKnown RBP10.14□□□□□ -0.79
VPS41-201ENST00000265745 MKRN2Q9H000 416 aaKnown RBP10.14□□□□□ -0.79
VPS41-201ENST00000265745 INTS2Q9H0H0 1204 aaKnown RBP10.14□□□□□ -0.79
VPS41-201ENST00000265745 CYP8B1Q9UNU6 501 aa10.14□□□□□ -0.79
VPS41-201ENST00000265745 GON4LQ3T8J9 2241 aa10.14□□□□□ -0.79
VPS41-201ENST00000265745 ARHGAP33O14559 1287 aa10.13□□□□□ -0.79
VPS41-201ENST00000265745 SYNCRIPO60506 623 aaKnown RBP10.13□□□□□ -0.79
VPS41-201ENST00000265745 TSPAN3O60637 253 aa10.13□□□□□ -0.79
VPS41-201ENST00000265745 FBXO21O94952 628 aa10.13□□□□□ -0.79
VPS41-201ENST00000265745 FGFR1OPO95684 399 aaKnown RBP10.13□□□□□ -0.79
VPS41-201ENST00000265745 LTFP02788 710 aa10.13□□□□□ -0.79
VPS41-201ENST00000265745 FYNP06241 537 aa10.13□□□□□ -0.79
VPS41-201ENST00000265745 ENGP17813 658 aa10.13□□□□□ -0.79
VPS41-201ENST00000265745 ZNF234Q14588 700 aa10.13□□□□□ -0.79
VPS41-201ENST00000265745 STARD3Q14849 445 aa10.13□□□□□ -0.79
VPS41-201ENST00000265745 E2F5Q15329 346 aa10.13□□□□□ -0.79
VPS41-201ENST00000265745 DUOXA1Q1HG43 343 aa10.13□□□□□ -0.79
VPS41-201ENST00000265745 PSAPL1Q6NUJ1 521 aa10.13□□□□□ -0.79
VPS41-201ENST00000265745 TMPRSS6Q8IU80 811 aa10.13□□□□□ -0.79
VPS41-201ENST00000265745 UNC45BQ8IWX7 931 aa10.13□□□□□ -0.79
VPS41-201ENST00000265745 CEP76Q8TAP6 659 aa10.13□□□□□ -0.79
VPS41-201ENST00000265745 CLEC4CQ8WTT0 213 aa10.13□□□□□ -0.79
VPS41-201ENST00000265745 STK32AQ8WU08 396 aa10.13□□□□□ -0.79
VPS41-201ENST00000265745 AZIN2Q96A70 460 aa10.13□□□□□ -0.79
VPS41-201ENST00000265745 MED15Q96RN5 788 aa10.13□□□□□ -0.79
VPS41-201ENST00000265745 SLC4A5Q9BY07 1137 aa10.13□□□□□ -0.79
VPS41-201ENST00000265745 CIPCQ9C0C6 399 aa10.13□□□□□ -0.79
VPS41-201ENST00000265745 PRDM16Q9HAZ2 1276 aa10.13□□□□□ -0.79
VPS41-201ENST00000265745 CAPN10Q9HC96 672 aa10.13□□□□□ -0.79
VPS41-201ENST00000265745 UBE2TQ9NPD8 197 aaPredicted RBP10.13□□□□□ -0.79
VPS41-201ENST00000265745 CD93Q9NPY3 652 aa10.13□□□□□ -0.79
VPS41-201ENST00000265745 ITM2CQ9NQX7 267 aa10.13□□□□□ -0.79
VPS41-201ENST00000265745 RWDD2AQ9UIY3 292 aa10.13□□□□□ -0.79
VPS41-201ENST00000265745 SLC6A14Q9UN76 642 aa10.13□□□□□ -0.79
VPS41-201ENST00000265745 ATXN2Q99700 1313 aaKnown RBP10.12□□□□□ -0.79
VPS41-201ENST00000265745 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.12□□□□□ -0.79
VPS41-201ENST00000265745 GOLGA6L7A0A1B0GV03 622 aa10.12□□□□□ -0.79
VPS41-201ENST00000265745 GIPC1O14908 333 aa10.12□□□□□ -0.79
VPS41-201ENST00000265745 NDUFS2O75306 463 aa10.12□□□□□ -0.79
VPS41-201ENST00000265745 CFIP05156 583 aa10.12□□□□□ -0.79
VPS41-201ENST00000265745 SERPINF2P08697 491 aa10.12□□□□□ -0.79
VPS41-201ENST00000265745 NCAM1P13591 858 aa10.12□□□□□ -0.79
VPS41-201ENST00000265745 KRT5P13647 590 aa10.12□□□□□ -0.79
VPS41-201ENST00000265745 CEACAM1P13688 526 aa10.12□□□□□ -0.79
VPS41-201ENST00000265745 CSRP1P21291 193 aaKnown RBP10.12□□□□□ -0.79
VPS41-201ENST00000265745 CD6P30203 668 aa10.12□□□□□ -0.79
VPS41-201ENST00000265745 SLC11A2P49281 568 aa10.12□□□□□ -0.79
VPS41-201ENST00000265745 NOVA1P51513 510 aaKnown RBP10.12□□□□□ -0.79
VPS41-201ENST00000265745 SGSHP51688 502 aa10.12□□□□□ -0.79
VPS41-201ENST00000265745 UBE2HP62256 183 aa10.12□□□□□ -0.79
VPS41-201ENST00000265745 SHC2P98077 582 aa10.12□□□□□ -0.79
VPS41-201ENST00000265745 GFPT1Q06210 699 aaPredicted RBP10.12□□□□□ -0.79
VPS41-201ENST00000265745 RING1Q06587 406 aa10.12□□□□□ -0.79
VPS41-201ENST00000265745 CAMK4Q16566 473 aa10.12□□□□□ -0.79
VPS41-201ENST00000265745 UAP1L1Q3KQV9 507 aa10.12□□□□□ -0.79
VPS41-201ENST00000265745 FAM133BQ5BKY9 247 aaKnown RBP10.12□□□□□ -0.79
VPS41-201ENST00000265745 MPP7Q5T2T1 576 aa10.12□□□□□ -0.79
VPS41-201ENST00000265745 SH3PXD2AQ5TCZ1 1133 aa10.12□□□□□ -0.79
VPS41-201ENST00000265745 PIK3R6Q5UE93 754 aa10.12□□□□□ -0.79
VPS41-201ENST00000265745 DMRTA1Q5VZB9 504 aa10.12□□□□□ -0.79
VPS41-201ENST00000265745 NUGGCQ68CJ6 796 aa10.12□□□□□ -0.79
VPS41-201ENST00000265745 RFWD3Q6PCD5 774 aa10.12□□□□□ -0.79
VPS41-201ENST00000265745 KIAA1324Q6UXG2 1013 aaKnown RBP10.12□□□□□ -0.79
VPS41-201ENST00000265745 KIAA0907Q7Z7F0 614 aaPredicted RBP10.12□□□□□ -0.79
VPS41-201ENST00000265745 ADIPOR2Q86V24 386 aa10.12□□□□□ -0.79
VPS41-201ENST00000265745 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.12□□□□□ -0.79
VPS41-201ENST00000265745 ZNF606Q8WXB4 792 aa10.12□□□□□ -0.79
VPS41-201ENST00000265745 GOLGA1Q92805 767 aa10.12□□□□□ -0.79
VPS41-201ENST00000265745 FOXJ1Q92949 421 aa10.12□□□□□ -0.79
VPS41-201ENST00000265745 SIPA1Q96FS4 1042 aa10.12□□□□□ -0.79
VPS41-201ENST00000265745 TOE1Q96GM8 510 aaKnown RBP10.12□□□□□ -0.79
VPS41-201ENST00000265745 HSPA12BQ96MM6 686 aa10.12□□□□□ -0.79
VPS41-201ENST00000265745 CRACR2AQ9BSW2 395 aa10.12□□□□□ -0.79
VPS41-201ENST00000265745 IRX2Q9BZI1 471 aaPredicted RBP10.12□□□□□ -0.79
VPS41-201ENST00000265745 MIS12Q9H081 205 aa10.12□□□□□ -0.79
VPS41-201ENST00000265745 WSB2Q9NYS7 404 aaPredicted RBP10.12□□□□□ -0.79
VPS41-201ENST00000265745 USP36Q9P275 1121 aaKnown RBP10.12□□□□□ -0.79
VPS41-201ENST00000265745 PLA2G4CQ9UP65 541 aa10.12□□□□□ -0.79
VPS41-201ENST00000265745 MYOFQ9NZM1 2061 aa10.11□□□□□ -0.79
VPS41-201ENST00000265745 KCNJ18B7U540 433 aa10.11□□□□□ -0.79
VPS41-201ENST00000265745 IRAK2O43187 625 aa10.11□□□□□ -0.79
VPS41-201ENST00000265745 SART1O43290 800 aaKnown RBP10.11□□□□□ -0.79
VPS41-201ENST00000265745 ACSL4O60488 711 aa10.11□□□□□ -0.79
VPS41-201ENST00000265745 LETM1O95202 739 aaPredicted RBP10.11□□□□□ -0.79
VPS41-201ENST00000265745 IGLV3-19P01714 112 aa10.11□□□□□ -0.79
VPS41-201ENST00000265745 EPHX1P07099 455 aa10.11□□□□□ -0.79
VPS41-201ENST00000265745 PRKCHP24723 683 aa10.11□□□□□ -0.79
VPS41-201ENST00000265745 SLC6A4P31645 630 aa10.11□□□□□ -0.79
VPS41-201ENST00000265745 ACADSBP45954 432 aa10.11□□□□□ -0.79
VPS41-201ENST00000265745 MAPK8P45983 427 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms