RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 SPATA31C1P0DKV0 1188 aa9.02□□□□□ -0.96
VAPB-201ENST00000265619 MYCLP12524 364 aaPredicted RBP9.02□□□□□ -0.96
VAPB-201ENST00000265619 L1CAMP32004 1257 aa9.02□□□□□ -0.96
VAPB-201ENST00000265619 PSMC2P35998 433 aaKnown RBP9.02□□□□□ -0.96
VAPB-201ENST00000265619 CSE1LP55060 971 aaKnown RBP9.02□□□□□ -0.96
VAPB-201ENST00000265619 MRPS9P82933 396 aaKnown RBP9.02□□□□□ -0.96
VAPB-201ENST00000265619 SLC18A2Q05940 514 aa9.02□□□□□ -0.96
VAPB-201ENST00000265619 GALNT18Q6P9A2 607 aa9.02□□□□□ -0.96
VAPB-201ENST00000265619 MCF2L2Q86YR7 1114 aa9.02□□□□□ -0.96
VAPB-201ENST00000265619 TMEM102Q8N9M5 508 aaPredicted RBP9.02□□□□□ -0.96
VAPB-201ENST00000265619 C7orf26Q96N11 449 aa9.02□□□□□ -0.96
VAPB-201ENST00000265619 AMNQ9BXJ7 453 aa9.02□□□□□ -0.96
VAPB-201ENST00000265619 GCOM2Q9BZD3 368 aaPredicted RBP9.02□□□□□ -0.96
VAPB-201ENST00000265619 RAB34Q9BZG1 259 aa9.02□□□□□ -0.96
VAPB-201ENST00000265619 PCIF1Q9H4Z3 704 aa9.02□□□□□ -0.96
VAPB-201ENST00000265619 ACSS3Q9H6R3 686 aa9.02□□□□□ -0.96
VAPB-201ENST00000265619 IFT122Q9HBG6 1241 aa9.02□□□□□ -0.96
VAPB-201ENST00000265619 MRGBPQ9NV56 204 aa9.02□□□□□ -0.96
VAPB-201ENST00000265619 PNPOQ9NVS9 261 aa9.02□□□□□ -0.96
VAPB-201ENST00000265619 AVILO75366 819 aa9.02□□□□□ -0.97
VAPB-201ENST00000265619 BAIAP3O94812 1187 aa9.02□□□□□ -0.97
VAPB-201ENST00000265619 TMEM63AO94886 807 aa9.02□□□□□ -0.97
VAPB-201ENST00000265619 CFHP08603 1231 aa9.02□□□□□ -0.97
VAPB-201ENST00000265619 ENO2P09104 434 aaPredicted RBP9.02□□□□□ -0.97
VAPB-201ENST00000265619 RFC1P35251 1148 aaPredicted RBP9.02□□□□□ -0.97
VAPB-201ENST00000265619 IDUAP35475 653 aa9.02□□□□□ -0.97
VAPB-201ENST00000265619 GALNT2Q10471 571 aa9.02□□□□□ -0.97
VAPB-201ENST00000265619 BBS9Q3SYG4 887 aa9.02□□□□□ -0.97
VAPB-201ENST00000265619 MGAT5BQ3V5L5 792 aa9.02□□□□□ -0.97
VAPB-201ENST00000265619 IL23RQ5VWK5 629 aa9.02□□□□□ -0.97
VAPB-201ENST00000265619 SLC9A4Q6AI14 798 aa9.02□□□□□ -0.97
VAPB-201ENST00000265619 TXNRD3NBQ6F5E7 133 aa9.02□□□□□ -0.97
VAPB-201ENST00000265619 FAAH2Q6GMR7 532 aa9.02□□□□□ -0.97
VAPB-201ENST00000265619 SAMD3Q8N6K7 520 aa9.02□□□□□ -0.97
VAPB-201ENST00000265619 ADAM32Q8TC27 787 aa9.02□□□□□ -0.97
VAPB-201ENST00000265619 CPA5Q8WXQ8 436 aa9.02□□□□□ -0.97
VAPB-201ENST00000265619 POLE4Q9NR33 117 aa9.02□□□□□ -0.97
VAPB-201ENST00000265619 C6orf203Q9P0P8 240 aaPredicted RBP9.02□□□□□ -0.97
VAPB-201ENST00000265619 KLHL42Q9P2K6 505 aa9.02□□□□□ -0.97
VAPB-201ENST00000265619 AGO2Q9UKV8 859 aaKnown RBP9.02□□□□□ -0.97
VAPB-201ENST00000265619 ERVK-11Q9UQG0 969 aa9.02□□□□□ -0.97
VAPB-201ENST00000265619 MYH9P35579 1960 aaKnown RBP9.02□□□□□ -0.97
VAPB-201ENST00000265619 C1orf232A0A0U1RR37 186 aa9.02□□□□□ -0.97
VAPB-201ENST00000265619 ADM5C9JUS6 153 aa9.02□□□□□ -0.97
VAPB-201ENST00000265619 ATP2A1O14983 1001 aa9.02□□□□□ -0.97
VAPB-201ENST00000265619 CLIC3O95833 236 aa9.02□□□□□ -0.97
VAPB-201ENST00000265619 CHEK2O96017 543 aa9.02□□□□□ -0.97
VAPB-201ENST00000265619 TCN1P20061 433 aaPredicted RBP9.02□□□□□ -0.97
VAPB-201ENST00000265619 TPTEP56180 551 aa9.02□□□□□ -0.97
VAPB-201ENST00000265619 PRAMEP78395 509 aa9.02□□□□□ -0.97
VAPB-201ENST00000265619 GRM1Q13255 1194 aa9.02□□□□□ -0.97
VAPB-201ENST00000265619 HIF1AQ16665 826 aa9.02□□□□□ -0.97
VAPB-201ENST00000265619 RGS21Q2M5E4 152 aa9.02□□□□□ -0.97
VAPB-201ENST00000265619 RARS2Q5T160 578 aaKnown RBP9.02□□□□□ -0.97
VAPB-201ENST00000265619 GPR141Q7Z602 305 aa9.02□□□□□ -0.97
VAPB-201ENST00000265619 CARM1Q86X55 608 aa9.02□□□□□ -0.97
VAPB-201ENST00000265619 CAPSLQ8WWF8 208 aa9.02□□□□□ -0.97
VAPB-201ENST00000265619 TMEM79Q9BSE2 394 aa9.02□□□□□ -0.97
VAPB-201ENST00000265619 NUF2Q9BZD4 464 aa9.02□□□□□ -0.97
VAPB-201ENST00000265619 INO80BQ9C086 356 aaPredicted RBP9.02□□□□□ -0.97
VAPB-201ENST00000265619 HIPK3Q9H422 1215 aa9.02□□□□□ -0.97
VAPB-201ENST00000265619 BCAP29Q9UHQ4 241 aa9.02□□□□□ -0.97
VAPB-201ENST00000265619 GTF3C4Q9UKN8 822 aa9.02□□□□□ -0.97
VAPB-201ENST00000265619 PADI4Q9UM07 663 aa9.02□□□□□ -0.97
VAPB-201ENST00000265619 SSX2IPQ9Y2D8 614 aa9.02□□□□□ -0.97
VAPB-201ENST00000265619 ZNF536O15090 1300 aa9.02□□□□□ -0.97
VAPB-201ENST00000265619 TRIM49D1C9J1S8 452 aa9.01□□□□□ -0.97
VAPB-201ENST00000265619 I3L4J1 428 aa9.01□□□□□ -0.97
VAPB-201ENST00000265619 DYNC1LI2O43237 492 aaPredicted RBP9.01□□□□□ -0.97
VAPB-201ENST00000265619 DCXO43602 365 aa9.01□□□□□ -0.97
VAPB-201ENST00000265619 JRKO75564 520 aa9.01□□□□□ -0.97
VAPB-201ENST00000265619 PCYT1AP49585 367 aa9.01□□□□□ -0.97
VAPB-201ENST00000265619 CENPCQ03188 943 aa9.01□□□□□ -0.97
VAPB-201ENST00000265619 TNK2Q07912 1038 aa9.01□□□□□ -0.97
VAPB-201ENST00000265619 INAVAQ3KP66 663 aa9.01□□□□□ -0.97
VAPB-201ENST00000265619 CCDC58Q4VC31 144 aa9.01□□□□□ -0.97
VAPB-201ENST00000265619 C1orf220Q5T0J3 134 aa9.01□□□□□ -0.97
VAPB-201ENST00000265619 C16orf46Q6P387 395 aa9.01□□□□□ -0.97
VAPB-201ENST00000265619 CENPUQ71F23 418 aa9.01□□□□□ -0.97
VAPB-201ENST00000265619 CCDC33Q8N5R6 958 aa9.01□□□□□ -0.97
VAPB-201ENST00000265619 AGBL3Q8NEM8 1001 aa9.01□□□□□ -0.97
VAPB-201ENST00000265619 BHLHE22Q8NFJ8 381 aaPredicted RBP9.01□□□□□ -0.97
VAPB-201ENST00000265619 ALPK1Q96QP1 1244 aa9.01□□□□□ -0.97
VAPB-201ENST00000265619 GMLQ99445 158 aa9.01□□□□□ -0.97
VAPB-201ENST00000265619 RIOX1Q9H6W3 641 aa9.01□□□□□ -0.97
VAPB-201ENST00000265619 DAPK2Q9UIK4 370 aa9.01□□□□□ -0.97
VAPB-201ENST00000265619 CDH7Q9ULB5 785 aa9.01□□□□□ -0.97
VAPB-201ENST00000265619 DNAJC16Q9Y2G8 782 aa9.01□□□□□ -0.97
VAPB-201ENST00000265619 QSER1Q2KHR3 1735 aa9.01□□□□□ -0.97
VAPB-201ENST00000265619 ARHGEF37A1IGU5 675 aa9.01□□□□□ -0.97
VAPB-201ENST00000265619 NOP56O00567 594 aaKnown RBP9.01□□□□□ -0.97
VAPB-201ENST00000265619 GIPC1O14908 333 aa9.01□□□□□ -0.97
VAPB-201ENST00000265619 SNNO75324 88 aaPredicted RBP9.01□□□□□ -0.97
VAPB-201ENST00000265619 RSL1D1O76021 490 aaKnown RBP9.01□□□□□ -0.97
VAPB-201ENST00000265619 MYO1DO94832 1006 aa9.01□□□□□ -0.97
VAPB-201ENST00000265619 NCF2P19878 526 aaPredicted RBP9.01□□□□□ -0.97
VAPB-201ENST00000265619 CAP2P40123 477 aa9.01□□□□□ -0.97
VAPB-201ENST00000265619 TRAF2Q12933 501 aa9.01□□□□□ -0.97
VAPB-201ENST00000265619 TNFAIP1Q13829 316 aa9.01□□□□□ -0.97
VAPB-201ENST00000265619 SEPT6Q14141 434 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms