RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 KDELR1P24390 212 aa16.71■□□□□ 0.27
GPC1-201ENST00000264039 PIK3R1P27986 724 aa16.71■□□□□ 0.27
GPC1-201ENST00000264039 MIPP30301 263 aa16.71■□□□□ 0.27
GPC1-201ENST00000264039 SLC18A1P54219 525 aa16.71■□□□□ 0.27
GPC1-201ENST00000264039 MRPS15P82914 257 aaKnown RBP16.71■□□□□ 0.27
GPC1-201ENST00000264039 LDHDQ86WU2 507 aa16.71■□□□□ 0.27
GPC1-201ENST00000264039 SPATA6LQ8N4H0 392 aa16.71■□□□□ 0.27
GPC1-201ENST00000264039 ACER1Q8TDN7 264 aa16.71■□□□□ 0.27
GPC1-201ENST00000264039 PBXIP1Q96AQ6 731 aa16.71■□□□□ 0.27
GPC1-201ENST00000264039 CCDC106Q9BWC9 280 aa16.71■□□□□ 0.27
GPC1-201ENST00000264039 ASNSD1Q9NWL6 643 aa16.71■□□□□ 0.27
GPC1-201ENST00000264039 TUBGCP4Q9UGJ1 667 aa16.71■□□□□ 0.27
GPC1-201ENST00000264039 VPS51Q9UID3 782 aa16.71■□□□□ 0.27
GPC1-201ENST00000264039 USP18Q9UMW8 372 aa16.71■□□□□ 0.27
GPC1-201ENST00000264039 PCDHAC2Q9Y5I4 1007 aa16.71■□□□□ 0.27
GPC1-201ENST00000264039 APOL1O14791 398 aa16.7■□□□□ 0.26
GPC1-201ENST00000264039 GRIA3P42263 894 aa16.7■□□□□ 0.26
GPC1-201ENST00000264039 ACTR2P61160 394 aa16.7■□□□□ 0.26
GPC1-201ENST00000264039 ABCE1P61221 599 aaKnown RBP16.7■□□□□ 0.26
GPC1-201ENST00000264039 MYBPC1Q00872 1141 aa16.7■□□□□ 0.26
GPC1-201ENST00000264039 MTA1Q13330 715 aa16.7■□□□□ 0.26
GPC1-201ENST00000264039 AGKQ53H12 422 aa16.7■□□□□ 0.26
GPC1-201ENST00000264039 TMEM179Q6ZVK1 233 aa16.7■□□□□ 0.26
GPC1-201ENST00000264039 ZNF677Q86XU0 584 aa16.7■□□□□ 0.26
GPC1-201ENST00000264039 ATP6V0A1Q93050 837 aa16.7■□□□□ 0.26
GPC1-201ENST00000264039 CAB39LQ9H9S4 337 aa16.7■□□□□ 0.26
GPC1-201ENST00000264039 TRPC7Q9HCX4 862 aa16.7■□□□□ 0.26
GPC1-201ENST00000264039 CDYLQ9Y232 598 aa16.7■□□□□ 0.26
GPC1-201ENST00000264039 COMMD10Q9Y6G5 202 aa16.7■□□□□ 0.26
GPC1-201ENST00000264039 MYPNQ86TC9 1320 aa16.7■□□□□ 0.26
GPC1-201ENST00000264039 A0A087WXM4 84 aa16.7■□□□□ 0.26
GPC1-201ENST00000264039 CRCPO75575 148 aa16.7■□□□□ 0.26
GPC1-201ENST00000264039 GRIA1P42261 906 aa16.7■□□□□ 0.26
GPC1-201ENST00000264039 SERPINB9P50453 376 aa16.7■□□□□ 0.26
GPC1-201ENST00000264039 STX1BP61266 288 aa16.7■□□□□ 0.26
GPC1-201ENST00000264039 XIAPP98170 497 aa16.7■□□□□ 0.26
GPC1-201ENST00000264039 PLIN5Q00G26 463 aa16.7■□□□□ 0.26
GPC1-201ENST00000264039 GCNT1Q02742 428 aa16.7■□□□□ 0.26
GPC1-201ENST00000264039 C15orf59Q2T9L4 293 aaPredicted RBP16.7■□□□□ 0.26
GPC1-201ENST00000264039 IL23RQ5VWK5 629 aa16.7■□□□□ 0.26
GPC1-201ENST00000264039 MON1BQ7L1V2 547 aa16.7■□□□□ 0.26
GPC1-201ENST00000264039 ERI1Q8IV48 349 aaKnown RBP16.7■□□□□ 0.26
GPC1-201ENST00000264039 RAVER1Q8IY67 606 aaKnown RBP16.7■□□□□ 0.26
GPC1-201ENST00000264039 CPNE9Q8IYJ1 553 aa16.7■□□□□ 0.26
GPC1-201ENST00000264039 PCDH12Q9NPG4 1184 aa16.7■□□□□ 0.26
GPC1-201ENST00000264039 PKD2L2Q9NZM6 624 aa16.7■□□□□ 0.26
GPC1-201ENST00000264039 TJP2Q9UDY2 1190 aa16.7■□□□□ 0.26
GPC1-201ENST00000264039 DNAJB4Q9UDY4 337 aa16.7■□□□□ 0.26
GPC1-201ENST00000264039 CYP3A7-CYP3A51PA0A087WV96 503 aa16.7■□□□□ 0.26
GPC1-201ENST00000264039 PARNO95453 639 aaKnown RBP16.7■□□□□ 0.26
GPC1-201ENST00000264039 CYP3A7P24462 503 aa16.7■□□□□ 0.26
GPC1-201ENST00000264039 CDH8P55286 799 aa16.7■□□□□ 0.26
GPC1-201ENST00000264039 CDKL1Q00532 357 aa16.7■□□□□ 0.26
GPC1-201ENST00000264039 ADGRE1Q14246 886 aa16.7■□□□□ 0.26
GPC1-201ENST00000264039 MOXD1Q6UVY6 613 aa16.7■□□□□ 0.26
GPC1-201ENST00000264039 KYAT3Q6YP21 454 aaKnown RBP16.7■□□□□ 0.26
GPC1-201ENST00000264039 PID1Q7Z2X4 250 aa16.7■□□□□ 0.26
GPC1-201ENST00000264039 C12orf43Q96C57 262 aaKnown RBP16.7■□□□□ 0.26
GPC1-201ENST00000264039 VPS50Q96JG6 964 aa16.7■□□□□ 0.26
GPC1-201ENST00000264039 MTMR12Q9C0I1 747 aa16.7■□□□□ 0.26
GPC1-201ENST00000264039 ZNRF3Q9ULT6 936 aa16.7■□□□□ 0.26
GPC1-201ENST00000264039 MYO18AQ92614 2054 aaKnown RBP16.7■□□□□ 0.26
GPC1-201ENST00000264039 DDTLA6NHG4 134 aaPredicted RBP16.69■□□□□ 0.26
GPC1-201ENST00000264039 PDLIM1O00151 329 aa16.69■□□□□ 0.26
GPC1-201ENST00000264039 MYL6P60660 151 aa16.69■□□□□ 0.26
GPC1-201ENST00000264039 SLC9B1Q4ZJI4 515 aa16.69■□□□□ 0.26
GPC1-201ENST00000264039 UNC5AQ6ZN44 842 aa16.69■□□□□ 0.26
GPC1-201ENST00000264039 TMEM26Q6ZUK4 368 aa16.69■□□□□ 0.26
GPC1-201ENST00000264039 TFB1MQ8WVM0 346 aaKnown RBP16.69■□□□□ 0.26
GPC1-201ENST00000264039 OR52B2Q96RD2 323 aa16.69■□□□□ 0.26
GPC1-201ENST00000264039 RSAD1Q9HA92 442 aa16.69■□□□□ 0.26
GPC1-201ENST00000264039 RAVER2Q9HCJ3 691 aaKnown RBP16.69■□□□□ 0.26
GPC1-201ENST00000264039 EGFL7Q9UHF1 273 aa16.69■□□□□ 0.26
GPC1-201ENST00000264039 RAB26Q9ULW5 256 aa16.69■□□□□ 0.26
GPC1-201ENST00000264039 A8MU76 341 aa16.69■□□□□ 0.26
GPC1-201ENST00000264039 PIGNO95427 931 aa16.69■□□□□ 0.26
GPC1-201ENST00000264039 GSTT2P0CG29 244 aa16.69■□□□□ 0.26
GPC1-201ENST00000264039 GSTT2BP0CG30 244 aa16.69■□□□□ 0.26
GPC1-201ENST00000264039 PTPN1P18031 435 aaKnown RBP16.69■□□□□ 0.26
GPC1-201ENST00000264039 TBXAS1P24557 533 aaPredicted RBP16.69■□□□□ 0.26
GPC1-201ENST00000264039 C1QBPQ07021 282 aaKnown RBP16.69■□□□□ 0.26
GPC1-201ENST00000264039 FAM98CQ17RN3 349 aaKnown RBP16.69■□□□□ 0.26
GPC1-201ENST00000264039 SETD3Q86TU7 594 aaPredicted RBP16.69■□□□□ 0.26
GPC1-201ENST00000264039 SLC9A9Q8IVB4 645 aa16.69■□□□□ 0.26
GPC1-201ENST00000264039 C17orf50Q8WW18 174 aa16.69■□□□□ 0.26
GPC1-201ENST00000264039 BORCS5Q969J3 196 aa16.69■□□□□ 0.26
GPC1-201ENST00000264039 MKL1Q969V6 931 aa16.69■□□□□ 0.26
GPC1-201ENST00000264039 APBA2Q99767 749 aa16.69■□□□□ 0.26
GPC1-201ENST00000264039 CLK4Q9HAZ1 481 aaKnown RBP16.69■□□□□ 0.26
GPC1-201ENST00000264039 STK32BQ9NY57 414 aa16.69■□□□□ 0.26
GPC1-201ENST00000264039 ITGA11Q9UKX5 1188 aa16.69■□□□□ 0.26
GPC1-201ENST00000264039 GPC6Q9Y625 555 aaPredicted RBP16.69■□□□□ 0.26
GPC1-201ENST00000264039 MPSTP25325 297 aa16.69■□□□□ 0.26
GPC1-201ENST00000264039 ADSSP30520 456 aa16.69■□□□□ 0.26
GPC1-201ENST00000264039 TRPC1P48995 793 aa16.69■□□□□ 0.26
GPC1-201ENST00000264039 IFRD2Q12894 506 aaPredicted RBP16.69■□□□□ 0.26
GPC1-201ENST00000264039 PGS1Q32NB8 556 aa16.69■□□□□ 0.26
GPC1-201ENST00000264039 Q3C1V9 767 aa16.69■□□□□ 0.26
GPC1-201ENST00000264039 TBCELQ5QJ74 424 aa16.69■□□□□ 0.26
GPC1-201ENST00000264039 TMC5Q6UXY8 1006 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms