RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 ATG14Q6ZNE5 492 aa15.4■□□□□ 0.06
XRCC1-201ENST00000262887 Q6ZNX1 250 aa15.4■□□□□ 0.06
XRCC1-201ENST00000262887 PATL1Q86TB9 770 aaKnown RBP15.4■□□□□ 0.06
XRCC1-201ENST00000262887 C10orf107Q8IVU9 208 aa15.4■□□□□ 0.06
XRCC1-201ENST00000262887 TSPAN14Q8NG11 270 aa15.4■□□□□ 0.06
XRCC1-201ENST00000262887 CCT7Q99832 543 aa15.4■□□□□ 0.06
XRCC1-201ENST00000262887 TARS2Q9BW92 718 aaKnown RBP15.4■□□□□ 0.06
XRCC1-201ENST00000262887 NIF3L1Q9GZT8 377 aa15.4■□□□□ 0.06
XRCC1-201ENST00000262887 PLGRKTQ9HBL7 147 aa15.4■□□□□ 0.06
XRCC1-201ENST00000262887 PDLIM7Q9NR12 457 aa15.4■□□□□ 0.06
XRCC1-201ENST00000262887 PRPF19Q9UMS4 504 aaKnown RBP15.4■□□□□ 0.06
XRCC1-201ENST00000262887 SH3PXD2BA1X283 911 aa15.39■□□□□ 0.06
XRCC1-201ENST00000262887 TRIM43BA6NCK2 446 aa15.39■□□□□ 0.06
XRCC1-201ENST00000262887 BOLA2-SMG1P6H3BVE0 249 aa15.39■□□□□ 0.06
XRCC1-201ENST00000262887 PLIN3O60664 434 aa15.39■□□□□ 0.06
XRCC1-201ENST00000262887 ITGBL1O95965 494 aaPredicted RBP15.39■□□□□ 0.06
XRCC1-201ENST00000262887 GRK2P25098 689 aa15.39■□□□□ 0.06
XRCC1-201ENST00000262887 RBL1P28749 1068 aa15.39■□□□□ 0.06
XRCC1-201ENST00000262887 YWHAEP62258 255 aaKnown RBP15.39■□□□□ 0.06
XRCC1-201ENST00000262887 SP4Q02446 784 aa15.39■□□□□ 0.06
XRCC1-201ENST00000262887 PDK1Q15118 436 aa15.39■□□□□ 0.06
XRCC1-201ENST00000262887 MPP5Q8N3R9 675 aa15.39■□□□□ 0.06
XRCC1-201ENST00000262887 BIRC8Q96P09 236 aa15.39■□□□□ 0.06
XRCC1-201ENST00000262887 SLC2A11Q9BYW1 496 aa15.39■□□□□ 0.06
XRCC1-201ENST00000262887 CYTH4Q9UIA0 394 aa15.39■□□□□ 0.06
XRCC1-201ENST00000262887 ITGB1BP2Q9UKP3 347 aa15.39■□□□□ 0.06
XRCC1-201ENST00000262887 HEY1Q9Y5J3 304 aa15.39■□□□□ 0.06
XRCC1-201ENST00000262887 HEMK1Q9Y5R4 338 aaPredicted RBP15.39■□□□□ 0.06
XRCC1-201ENST00000262887 NRXN2Q9P2S2 1712 aa15.39■□□□□ 0.05
XRCC1-201ENST00000262887 LRRIQ4A6NIV6 560 aa15.39■□□□□ 0.05
XRCC1-201ENST00000262887 K7ERI5 159 aa15.39■□□□□ 0.05
XRCC1-201ENST00000262887 ZBTB14O43829 449 aa15.39■□□□□ 0.05
XRCC1-201ENST00000262887 KLHL41O60662 606 aa15.39■□□□□ 0.05
XRCC1-201ENST00000262887 MAP3K6O95382 1288 aa15.39■□□□□ 0.05
XRCC1-201ENST00000262887 ZNF23P17027 643 aa15.39■□□□□ 0.05
XRCC1-201ENST00000262887 PSMC3P17980 439 aa15.39■□□□□ 0.05
XRCC1-201ENST00000262887 CNTFP26441 200 aa15.39■□□□□ 0.05
XRCC1-201ENST00000262887 HOXD12P35452 270 aa15.39■□□□□ 0.05
XRCC1-201ENST00000262887 CAP2P40123 477 aa15.39■□□□□ 0.05
XRCC1-201ENST00000262887 RPS6P62753 249 aaKnown RBP15.39■□□□□ 0.05
XRCC1-201ENST00000262887 ACAP1Q15027 740 aa15.39■□□□□ 0.05
XRCC1-201ENST00000262887 CYTH1Q15438 398 aa15.39■□□□□ 0.05
XRCC1-201ENST00000262887 SWSAP1Q6NVH7 229 aa15.39■□□□□ 0.05
XRCC1-201ENST00000262887 PACS1Q6VY07 963 aa15.39■□□□□ 0.05
XRCC1-201ENST00000262887 LPCAT2Q7L5N7 544 aa15.39■□□□□ 0.05
XRCC1-201ENST00000262887 LILRA2Q8N149 483 aa15.39■□□□□ 0.05
XRCC1-201ENST00000262887 RDM1Q8NG50 284 aa15.39■□□□□ 0.05
XRCC1-201ENST00000262887 KCNN1Q92952 543 aa15.39■□□□□ 0.05
XRCC1-201ENST00000262887 EBNA1BP2Q99848 306 aaKnown RBP15.39■□□□□ 0.05
XRCC1-201ENST00000262887 MTMR12Q9C0I1 747 aa15.39■□□□□ 0.05
XRCC1-201ENST00000262887 LIN28AQ9H9Z2 209 aaKnown RBP15.39■□□□□ 0.05
XRCC1-201ENST00000262887 MAN1C1Q9NR34 630 aa15.39■□□□□ 0.05
XRCC1-201ENST00000262887 RRN3Q9NYV6 651 aa15.39■□□□□ 0.05
XRCC1-201ENST00000262887 FBXO40Q9UH90 709 aa15.39■□□□□ 0.05
XRCC1-201ENST00000262887 BCAP29Q9UHQ4 241 aa15.39■□□□□ 0.05
XRCC1-201ENST00000262887 ARID2Q68CP9 1835 aa15.39■□□□□ 0.05
XRCC1-201ENST00000262887 TMEM247A6NEH6 219 aa15.39■□□□□ 0.05
XRCC1-201ENST00000262887 TPP1O14773 563 aa15.39■□□□□ 0.05
XRCC1-201ENST00000262887 AIM2O14862 343 aa15.39■□□□□ 0.05
XRCC1-201ENST00000262887 THRAP10827 490 aa15.39■□□□□ 0.05
XRCC1-201ENST00000262887 NUDT2P50583 147 aa15.39■□□□□ 0.05
XRCC1-201ENST00000262887 MTERF2Q49AM1 385 aa15.39■□□□□ 0.05
XRCC1-201ENST00000262887 KBTBD7Q8WVZ9 684 aa15.39■□□□□ 0.05
XRCC1-201ENST00000262887 NLRP7Q8WX94 980 aa15.39■□□□□ 0.05
XRCC1-201ENST00000262887 PEBP4Q96S96 227 aa15.39■□□□□ 0.05
XRCC1-201ENST00000262887 CPXM1Q96SM3 734 aa15.39■□□□□ 0.05
XRCC1-201ENST00000262887 GLIS2Q9BZE0 524 aaPredicted RBP15.39■□□□□ 0.05
XRCC1-201ENST00000262887 A0A1B0GTW7 788 aa15.38■□□□□ 0.05
XRCC1-201ENST00000262887 STBD1O95210 358 aa15.38■□□□□ 0.05
XRCC1-201ENST00000262887 ALDOAP04075 364 aaKnown RBP15.38■□□□□ 0.05
XRCC1-201ENST00000262887 ARRB2P32121 409 aa15.38■□□□□ 0.05
XRCC1-201ENST00000262887 PTGER2P43116 358 aa15.38■□□□□ 0.05
XRCC1-201ENST00000262887 ABCE1P61221 599 aaKnown RBP15.38■□□□□ 0.05
XRCC1-201ENST00000262887 GSTM4Q03013 218 aa15.38■□□□□ 0.05
XRCC1-201ENST00000262887 PDE1CQ14123 709 aaPredicted RBP15.38■□□□□ 0.05
XRCC1-201ENST00000262887 DHRS4L2Q6PKH6 230 aa15.38■□□□□ 0.05
XRCC1-201ENST00000262887 OLFML1Q6UWY5 402 aa15.38■□□□□ 0.05
XRCC1-201ENST00000262887 C16orf89Q6UX73 402 aa15.38■□□□□ 0.05
XRCC1-201ENST00000262887 XYLT1Q86Y38 959 aa15.38■□□□□ 0.05
XRCC1-201ENST00000262887 DEPTORQ8TB45 409 aa15.38■□□□□ 0.05
XRCC1-201ENST00000262887 SIGLEC10Q96LC7 697 aa15.38■□□□□ 0.05
XRCC1-201ENST00000262887 RMDN3Q96TC7 470 aa15.38■□□□□ 0.05
XRCC1-201ENST00000262887 PKP2Q99959 881 aa15.38■□□□□ 0.05
XRCC1-201ENST00000262887 INO80BQ9C086 356 aaPredicted RBP15.38■□□□□ 0.05
XRCC1-201ENST00000262887 ZNHIT2Q9UHR6 403 aa15.38■□□□□ 0.05
XRCC1-201ENST00000262887 PCDHA11Q9Y5I1 949 aa15.38■□□□□ 0.05
XRCC1-201ENST00000262887 TCP10L2B9ZVM9 353 aa15.38■□□□□ 0.05
XRCC1-201ENST00000262887 POLRMTO00411 1230 aaKnown RBP15.38■□□□□ 0.05
XRCC1-201ENST00000262887 STT3AP46977 705 aa15.38■□□□□ 0.05
XRCC1-201ENST00000262887 PRKCEQ02156 737 aa15.38■□□□□ 0.05
XRCC1-201ENST00000262887 CNTN2Q02246 1040 aa15.38■□□□□ 0.05
XRCC1-201ENST00000262887 ACMSDQ8TDX5 336 aa15.38■□□□□ 0.05
XRCC1-201ENST00000262887 TMEM143Q96AN5 459 aa15.38■□□□□ 0.05
XRCC1-201ENST00000262887 TMIGD2Q96BF3 282 aa15.38■□□□□ 0.05
XRCC1-201ENST00000262887 PRMT6Q96LA8 375 aaPredicted RBP15.38■□□□□ 0.05
XRCC1-201ENST00000262887 LENG8Q96PV6 779 aaPredicted RBP15.38■□□□□ 0.05
XRCC1-201ENST00000262887 MPHOSPH6Q99547 160 aaKnown RBP15.38■□□□□ 0.05
XRCC1-201ENST00000262887 PDCD2LQ9BRP1 358 aa15.38■□□□□ 0.05
XRCC1-201ENST00000262887 TBC1D12O60347 775 aa15.37■□□□□ 0.05
XRCC1-201ENST00000262887 ERBB2P04626 1255 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms