RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 ZNF534Q76KX8 674 aa16.37■□□□□ 0.21
LMNB1-201ENST00000261366 AMIGO2Q86SJ2 522 aa16.37■□□□□ 0.21
LMNB1-201ENST00000261366 MAPK15Q8TD08 544 aa16.37■□□□□ 0.21
LMNB1-201ENST00000261366 PRICKLE1Q96MT3 831 aaPredicted RBP16.37■□□□□ 0.21
LMNB1-201ENST00000261366 XYLT2Q9H1B5 865 aa16.37■□□□□ 0.21
LMNB1-201ENST00000261366 FAM159BA6NKW6 160 aa16.36■□□□□ 0.21
LMNB1-201ENST00000261366 TRDMT1O14717 391 aaKnown RBP16.36■□□□□ 0.21
LMNB1-201ENST00000261366 WDR46O15213 610 aaKnown RBP16.36■□□□□ 0.21
LMNB1-201ENST00000261366 BIRC5O15392 142 aa16.36■□□□□ 0.21
LMNB1-201ENST00000261366 DKC1O60832 514 aaKnown RBP eCLIP16.36■□□□□ 0.21
LMNB1-201ENST00000261366 DNAJA2O60884 412 aa16.36■□□□□ 0.21
LMNB1-201ENST00000261366 SUPT20HL2P0C7V6 817 aa16.36■□□□□ 0.21
LMNB1-201ENST00000261366 CXCL8P10145 99 aa16.36■□□□□ 0.21
LMNB1-201ENST00000261366 ERVK-10P10266 1014 aa16.36■□□□□ 0.21
LMNB1-201ENST00000261366 RALBP11234 206 aa16.36■□□□□ 0.21
LMNB1-201ENST00000261366 SAT1P21673 171 aa16.36■□□□□ 0.21
LMNB1-201ENST00000261366 TYK2P29597 1187 aa16.36■□□□□ 0.21
LMNB1-201ENST00000261366 GABRB2P47870 512 aa16.36■□□□□ 0.21
LMNB1-201ENST00000261366 SUPT20HL1Q3ZLR7 823 aa16.36■□□□□ 0.21
LMNB1-201ENST00000261366 CYP4V2Q6ZWL3 525 aaPredicted RBP16.36■□□□□ 0.21
LMNB1-201ENST00000261366 ARCQ7LC44 396 aa16.36■□□□□ 0.21
LMNB1-201ENST00000261366 PQLC1Q8N2U9 271 aa16.36■□□□□ 0.21
LMNB1-201ENST00000261366 C12orf29Q8N999 325 aa16.36■□□□□ 0.21
LMNB1-201ENST00000261366 RNF149Q8NC42 400 aa16.36■□□□□ 0.21
LMNB1-201ENST00000261366 OR52B2Q96RD2 323 aa16.36■□□□□ 0.21
LMNB1-201ENST00000261366 CDRT15Q96T59 188 aa16.36■□□□□ 0.21
LMNB1-201ENST00000261366 ELOVL4Q9GZR5 314 aa16.36■□□□□ 0.21
LMNB1-201ENST00000261366 SEPT10Q9P0V9 454 aa16.36■□□□□ 0.21
LMNB1-201ENST00000261366 TNS1Q9HBL0 1735 aaKnown RBP16.36■□□□□ 0.21
LMNB1-201ENST00000261366 ZNF646O15015 1829 aaPredicted RBP16.36■□□□□ 0.21
LMNB1-201ENST00000261366 SMIM31A0A1B0GVY4 71 aa16.36■□□□□ 0.21
LMNB1-201ENST00000261366 B4GALT5O43286 388 aa16.36■□□□□ 0.21
LMNB1-201ENST00000261366 HSPA4LO95757 839 aa16.36■□□□□ 0.21
LMNB1-201ENST00000261366 ENO3P13929 434 aaPredicted RBP16.36■□□□□ 0.21
LMNB1-201ENST00000261366 TFE3P19532 575 aaPredicted RBP16.36■□□□□ 0.21
LMNB1-201ENST00000261366 IL4RP24394 825 aa16.36■□□□□ 0.21
LMNB1-201ENST00000261366 CDH5P33151 784 aaPredicted RBP16.36■□□□□ 0.21
LMNB1-201ENST00000261366 MLH1P40692 756 aa16.36■□□□□ 0.21
LMNB1-201ENST00000261366 NRF1Q16656 503 aa16.36■□□□□ 0.21
LMNB1-201ENST00000261366 ZNF667Q5HYK9 610 aa16.36■□□□□ 0.21
LMNB1-201ENST00000261366 B3GNT6Q6ZMB0 384 aa16.36■□□□□ 0.21
LMNB1-201ENST00000261366 FAM183BPQ6ZVS7 135 aa16.36■□□□□ 0.21
LMNB1-201ENST00000261366 ADGRG6Q86SQ4 1221 aa16.36■□□□□ 0.21
LMNB1-201ENST00000261366 ZSCAN18Q8TBC5 510 aaPredicted RBP16.36■□□□□ 0.21
LMNB1-201ENST00000261366 GPRASP2Q96D09 838 aa16.36■□□□□ 0.21
LMNB1-201ENST00000261366 MYOZ2Q9NPC6 264 aa16.36■□□□□ 0.21
LMNB1-201ENST00000261366 CHCHD3Q9NX63 227 aaKnown RBP16.36■□□□□ 0.21
LMNB1-201ENST00000261366 ITGA11Q9UKX5 1188 aa16.36■□□□□ 0.21
LMNB1-201ENST00000261366 ARHGAP26Q9UNA1 814 aa16.36■□□□□ 0.21
LMNB1-201ENST00000261366 H3BSA7 217 aa16.36■□□□□ 0.21
LMNB1-201ENST00000261366 SERPINE1P05121 402 aa16.36■□□□□ 0.21
LMNB1-201ENST00000261366 RGS2P41220 211 aa16.36■□□□□ 0.21
LMNB1-201ENST00000261366 RPL5P46777 297 aaKnown RBP16.36■□□□□ 0.21
LMNB1-201ENST00000261366 PTPN11Q06124 597 aaPredicted RBP16.36■□□□□ 0.21
LMNB1-201ENST00000261366 SNAPC2Q13487 334 aa16.36■□□□□ 0.21
LMNB1-201ENST00000261366 SNX32Q86XE0 403 aa16.36■□□□□ 0.21
LMNB1-201ENST00000261366 AGBL3Q8NEM8 1001 aa16.36■□□□□ 0.21
LMNB1-201ENST00000261366 JADE3Q92613 823 aa16.36■□□□□ 0.21
LMNB1-201ENST00000261366 ATP2A3Q93084 1043 aa16.36■□□□□ 0.21
LMNB1-201ENST00000261366 SSX2IPQ9Y2D8 614 aa16.36■□□□□ 0.21
LMNB1-201ENST00000261366 AFG3L2Q9Y4W6 797 aa16.36■□□□□ 0.21
LMNB1-201ENST00000261366 CCDC78A2IDD5 438 aa16.35■□□□□ 0.21
LMNB1-201ENST00000261366 MED7O43513 233 aa16.35■□□□□ 0.21
LMNB1-201ENST00000261366 TBC1D12O60347 775 aa16.35■□□□□ 0.21
LMNB1-201ENST00000261366 TNNC2P02585 160 aa16.35■□□□□ 0.21
LMNB1-201ENST00000261366 XRCC1P18887 633 aaPredicted RBP16.35■□□□□ 0.21
LMNB1-201ENST00000261366 L1CAMP32004 1257 aa16.35■□□□□ 0.21
LMNB1-201ENST00000261366 THOP1P52888 689 aa16.35■□□□□ 0.21
LMNB1-201ENST00000261366 FLOT2Q14254 428 aa16.35■□□□□ 0.21
LMNB1-201ENST00000261366 PPP2R5DQ14738 602 aa16.35■□□□□ 0.21
LMNB1-201ENST00000261366 DLG2Q15700 870 aa16.35■□□□□ 0.21
LMNB1-201ENST00000261366 KBTBD6Q86V97 674 aa16.35■□□□□ 0.21
LMNB1-201ENST00000261366 SLC4A11Q8NBS3 891 aa16.35■□□□□ 0.21
LMNB1-201ENST00000261366 NSUN6Q8TEA1 469 aaKnown RBP16.35■□□□□ 0.21
LMNB1-201ENST00000261366 NLRP4Q96MN2 994 aa16.35■□□□□ 0.21
LMNB1-201ENST00000261366 CCDC28BQ9BUN5 200 aa16.35■□□□□ 0.21
LMNB1-201ENST00000261366 SEMA6AQ9H2E6 1030 aa16.35■□□□□ 0.21
LMNB1-201ENST00000261366 DHX35Q9H5Z1 703 aaKnown RBP16.35■□□□□ 0.21
LMNB1-201ENST00000261366 NRDE2Q9H7Z3 1164 aa16.35■□□□□ 0.21
LMNB1-201ENST00000261366 TXNDC16Q9P2K2 825 aa16.35■□□□□ 0.21
LMNB1-201ENST00000261366 TMCO1Q9UM00 188 aa16.35■□□□□ 0.21
LMNB1-201ENST00000261366 VWA5AO00534 786 aa16.35■□□□□ 0.21
LMNB1-201ENST00000261366 TMCC1O94876 653 aa16.35■□□□□ 0.21
LMNB1-201ENST00000261366 FGFR3P22607 806 aa16.35■□□□□ 0.21
LMNB1-201ENST00000261366 MGAT1P26572 445 aa16.35■□□□□ 0.21
LMNB1-201ENST00000261366 ZNF143P52747 638 aaPredicted RBP16.35■□□□□ 0.21
LMNB1-201ENST00000261366 ABCE1P61221 599 aaKnown RBP16.35■□□□□ 0.21
LMNB1-201ENST00000261366 KLF10Q13118 480 aa16.35■□□□□ 0.21
LMNB1-201ENST00000261366 FAM47CQ5HY64 1035 aa16.35■□□□□ 0.21
LMNB1-201ENST00000261366 NXNQ6DKJ4 435 aa16.35■□□□□ 0.21
LMNB1-201ENST00000261366 PACS1Q6VY07 963 aa16.35■□□□□ 0.21
LMNB1-201ENST00000261366 FAM83AQ86UY5 434 aa16.35■□□□□ 0.21
LMNB1-201ENST00000261366 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.35■□□□□ 0.21
LMNB1-201ENST00000261366 RDM1Q8NG50 284 aa16.35■□□□□ 0.21
LMNB1-201ENST00000261366 FNIP1Q8TF40 1166 aa16.35■□□□□ 0.21
LMNB1-201ENST00000261366 SNRNP25Q9BV90 132 aaKnown RBP16.35■□□□□ 0.21
LMNB1-201ENST00000261366 DHX33Q9H6R0 707 aaKnown RBP16.35■□□□□ 0.21
LMNB1-201ENST00000261366 CAB39LQ9H9S4 337 aa16.35■□□□□ 0.21
LMNB1-201ENST00000261366 FAM49BQ9NUQ9 324 aa16.35■□□□□ 0.21
LMNB1-201ENST00000261366 PCDHA11Q9Y5I1 949 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms