RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 PPIGQ13427 754 aaKnown RBP eCLIP28.57■■■□□ 2.16
CCM2-201ENST00000258781 HEATR6Q6AI08 1181 aaKnown RBP28.57■■■□□ 2.16
CCM2-201ENST00000258781 CCDC13Q8IYE1 715 aa28.57■■■□□ 2.16
CCM2-201ENST00000258781 BCL7CQ8WUZ0 217 aaPredicted RBP28.57■■■□□ 2.16
CCM2-201ENST00000258781 C8orf48Q96LL4 319 aa28.57■■■□□ 2.16
CCM2-201ENST00000258781 TMEM175Q9BSA9 504 aa28.57■■■□□ 2.16
CCM2-201ENST00000258781 GPR62Q9BZJ7 368 aa28.57■■■□□ 2.16
CCM2-201ENST00000258781 WDCPQ9H6R7 721 aa28.57■■■□□ 2.16
CCM2-201ENST00000258781 PPCSQ9HAB8 311 aa28.57■■■□□ 2.16
CCM2-201ENST00000258781 ANLNQ9NQW6 1124 aa28.57■■■□□ 2.16
CCM2-201ENST00000258781 ABI2Q9NYB9 513 aaPredicted RBP28.57■■■□□ 2.16
CCM2-201ENST00000258781 FGFR3P22607 806 aa28.57■■■□□ 2.16
CCM2-201ENST00000258781 MAGEA11P43364 429 aa28.57■■■□□ 2.16
CCM2-201ENST00000258781 MSS51Q4VC12 460 aa28.57■■■□□ 2.16
CCM2-201ENST00000258781 ZNF280DQ6N043 979 aa28.57■■■□□ 2.16
CCM2-201ENST00000258781 ATP11CQ8NB49 1132 aa28.57■■■□□ 2.16
CCM2-201ENST00000258781 PYROXD1Q8WU10 500 aa28.57■■■□□ 2.16
CCM2-201ENST00000258781 PCDHB5Q9Y5E4 795 aa28.57■■■□□ 2.16
CCM2-201ENST00000258781 RANBP2P49792 3224 aaKnown RBP28.56■■■□□ 2.16
CCM2-201ENST00000258781 I6L893 689 aaPredicted RBP28.56■■■□□ 2.16
CCM2-201ENST00000258781 TRIM66O15016 1216 aa28.56■■■□□ 2.16
CCM2-201ENST00000258781 LSP1P33241 339 aa28.56■■■□□ 2.16
CCM2-201ENST00000258781 PDK1Q15118 436 aa28.56■■■□□ 2.16
CCM2-201ENST00000258781 CTXN3Q4LDR2 81 aa28.56■■■□□ 2.16
CCM2-201ENST00000258781 FAM171A1Q5VUB5 890 aa28.56■■■□□ 2.16
CCM2-201ENST00000258781 PDZD4Q76G19 769 aaPredicted RBP28.56■■■□□ 2.16
CCM2-201ENST00000258781 VPS37BQ9H9H4 285 aa28.56■■■□□ 2.16
CCM2-201ENST00000258781 KIAA1671Q9BY89 1806 aa28.56■■■□□ 2.16
CCM2-201ENST00000258781 TPI1P60174 286 aa28.55■■■□□ 2.16
CCM2-201ENST00000258781 ELAVL2Q12926 359 aaKnown RBP28.55■■■□□ 2.16
CCM2-201ENST00000258781 PRKD1Q15139 912 aaPredicted RBP28.55■■■□□ 2.16
CCM2-201ENST00000258781 TDRPQ86YL5 185 aa28.55■■■□□ 2.16
CCM2-201ENST00000258781 SCN4BQ8IWT1 228 aa28.55■■■□□ 2.16
CCM2-201ENST00000258781 CCDC110Q8TBZ0 833 aa28.55■■■□□ 2.16
CCM2-201ENST00000258781 HTR3CQ8WXA8 447 aa28.55■■■□□ 2.16
CCM2-201ENST00000258781 ZBBXA8MT70 800 aa28.55■■■□□ 2.16
CCM2-201ENST00000258781 FAM72CH0Y354 149 aa28.55■■■□□ 2.16
CCM2-201ENST00000258781 PHBP35232 272 aa28.55■■■□□ 2.16
CCM2-201ENST00000258781 EIF4EBP2Q13542 120 aaPredicted RBP28.55■■■□□ 2.16
CCM2-201ENST00000258781 HP1BP3Q5SSJ5 553 aaPredicted RBP28.55■■■□□ 2.16
CCM2-201ENST00000258781 FAM72AQ5TYM5 149 aa28.55■■■□□ 2.16
CCM2-201ENST00000258781 BTBD8Q5XKL5 378 aa28.55■■■□□ 2.16
CCM2-201ENST00000258781 FAM72DQ6L9T8 149 aa28.55■■■□□ 2.16
CCM2-201ENST00000258781 FAM72BQ86X60 149 aa28.55■■■□□ 2.16
CCM2-201ENST00000258781 ANKMY2Q8IV38 441 aa28.55■■■□□ 2.16
CCM2-201ENST00000258781 VPS52Q8N1B4 723 aa28.55■■■□□ 2.16
CCM2-201ENST00000258781 B3GALT6Q96L58 329 aa28.55■■■□□ 2.16
CCM2-201ENST00000258781 EPAS1Q99814 870 aa28.55■■■□□ 2.16
CCM2-201ENST00000258781 FERMT1Q9BQL6 677 aa28.55■■■□□ 2.16
CCM2-201ENST00000258781 TKTL2Q9H0I9 626 aa28.55■■■□□ 2.16
CCM2-201ENST00000258781 TMEM51Q9NW97 253 aa28.55■■■□□ 2.16
CCM2-201ENST00000258781 EURLQ9NYK6 297 aa28.55■■■□□ 2.16
CCM2-201ENST00000258781 CXXC1Q9P0U4 656 aaPredicted RBP28.55■■■□□ 2.16
CCM2-201ENST00000258781 CLUHO75153 1309 aa28.54■■■□□ 2.16
CCM2-201ENST00000258781 EXOC1LA0A1B0GW35 172 aa28.54■■■□□ 2.16
CCM2-201ENST00000258781 PPP1R12AO14974 1030 aaPredicted RBP28.54■■■□□ 2.16
CCM2-201ENST00000258781 BANF1O75531 89 aa28.54■■■□□ 2.16
CCM2-201ENST00000258781 FGBP02675 491 aa28.54■■■□□ 2.16
CCM2-201ENST00000258781 GLUD2P49448 558 aa28.54■■■□□ 2.16
CCM2-201ENST00000258781 BBS9Q3SYG4 887 aa28.54■■■□□ 2.16
CCM2-201ENST00000258781 SMOC2Q9H3U7 446 aa28.54■■■□□ 2.16
CCM2-201ENST00000258781 VAV1P15498 845 aa28.53■■■□□ 2.16
CCM2-201ENST00000258781 GPX6P59796 221 aa28.53■■■□□ 2.16
CCM2-201ENST00000258781 ZSCAN26Q16670 478 aa28.53■■■□□ 2.16
CCM2-201ENST00000258781 TMEM240Q5SV17 173 aa28.53■■■□□ 2.16
CCM2-201ENST00000258781 FUT10Q6P4F1 479 aa28.53■■■□□ 2.16
CCM2-201ENST00000258781 MCUQ8NE86 351 aa28.53■■■□□ 2.16
CCM2-201ENST00000258781 CENPTQ96BT3 561 aa28.53■■■□□ 2.16
CCM2-201ENST00000258781 ETNK1Q9HBU6 452 aa28.53■■■□□ 2.16
CCM2-201ENST00000258781 FETUBQ9UGM5 382 aa28.53■■■□□ 2.16
CCM2-201ENST00000258781 SCML2Q9UQR0 700 aa28.53■■■□□ 2.16
CCM2-201ENST00000258781 IRAK2O43187 625 aa28.53■■■□□ 2.16
CCM2-201ENST00000258781 STK10O94804 968 aaKnown RBP28.53■■■□□ 2.16
CCM2-201ENST00000258781 ERCC2P18074 760 aa28.53■■■□□ 2.16
CCM2-201ENST00000258781 TPSB2P20231 275 aa28.53■■■□□ 2.16
CCM2-201ENST00000258781 RASA2Q15283 850 aa28.53■■■□□ 2.16
CCM2-201ENST00000258781 TPSAB1Q15661 275 aa28.53■■■□□ 2.16
CCM2-201ENST00000258781 CCDC38Q502W7 563 aa28.53■■■□□ 2.16
CCM2-201ENST00000258781 BRMS1LQ5PSV4 323 aa28.53■■■□□ 2.16
CCM2-201ENST00000258781 ARHGEF18Q6ZSZ5 1173 aa28.53■■■□□ 2.16
CCM2-201ENST00000258781 SCD5Q86SK9 330 aa28.53■■■□□ 2.16
CCM2-201ENST00000258781 EXOC3L1Q86VI1 746 aa28.53■■■□□ 2.16
CCM2-201ENST00000258781 CEP57Q86XR8 500 aa28.53■■■□□ 2.16
CCM2-201ENST00000258781 NUP93Q8N1F7 819 aa28.53■■■□□ 2.16
CCM2-201ENST00000258781 FBXO36Q8NEA4 188 aa28.53■■■□□ 2.16
CCM2-201ENST00000258781 LRRN4Q8WUT4 740 aa28.53■■■□□ 2.16
CCM2-201ENST00000258781 ARHGEF2Q92974 986 aaKnown RBP28.53■■■□□ 2.16
CCM2-201ENST00000258781 WDR83Q9BRX9 315 aaKnown RBP28.53■■■□□ 2.16
CCM2-201ENST00000258781 OSBPL2Q9H1P3 480 aa28.53■■■□□ 2.16
CCM2-201ENST00000258781 CTNNAL1Q9UBT7 734 aa28.53■■■□□ 2.16
CCM2-201ENST00000258781 A0A0A0MRY4 1105 aa28.52■■■□□ 2.16
CCM2-201ENST00000258781 SPATA13Q96N96 652 aa28.52■■■□□ 2.16
CCM2-201ENST00000258781 FBXO44Q9H4M3 255 aa28.52■■■□□ 2.16
CCM2-201ENST00000258781 ARHGEF38Q9NXL2 777 aa28.52■■■□□ 2.16
CCM2-201ENST00000258781 ALDH7A1P49419 539 aaKnown RBP28.51■■■□□ 2.15
CCM2-201ENST00000258781 IFRD2Q12894 506 aaPredicted RBP28.51■■■□□ 2.15
CCM2-201ENST00000258781 COL13A1Q5TAT6 717 aaPredicted RBP28.51■■■□□ 2.15
CCM2-201ENST00000258781 CCDC33Q8N5R6 958 aa28.51■■■□□ 2.15
CCM2-201ENST00000258781 RNF34Q969K3 372 aa28.51■■■□□ 2.15
CCM2-201ENST00000258781 LGMNQ99538 433 aa28.51■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms