RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 RPL21P46778 160 aaKnown RBP19.41■□□□□ 0.7
PTPRE-201ENST00000254667 MRPS6P82932 125 aaKnown RBP19.41■□□□□ 0.7
PTPRE-201ENST00000254667 MAD2L1Q13257 205 aaPredicted RBP19.41■□□□□ 0.7
PTPRE-201ENST00000254667 NFYCQ13952 458 aa19.41■□□□□ 0.7
PTPRE-201ENST00000254667 CYP51A1Q16850 503 aa19.41■□□□□ 0.7
PTPRE-201ENST00000254667 DPF3Q92784 378 aa19.41■□□□□ 0.7
PTPRE-201ENST00000254667 ULBP1Q9BZM6 244 aa19.41■□□□□ 0.7
PTPRE-201ENST00000254667 ACTR8Q9H981 624 aa19.41■□□□□ 0.7
PTPRE-201ENST00000254667 C6orf203Q9P0P8 240 aaPredicted RBP19.41■□□□□ 0.7
PTPRE-201ENST00000254667 DYRK3O43781 588 aa19.41■□□□□ 0.7
PTPRE-201ENST00000254667 SERPINE1P05121 402 aa19.41■□□□□ 0.7
PTPRE-201ENST00000254667 CYP2A6P11509 494 aaPredicted RBP19.41■□□□□ 0.7
PTPRE-201ENST00000254667 CCDC130P13994 396 aa19.41■□□□□ 0.7
PTPRE-201ENST00000254667 PECAM1P16284 738 aaPredicted RBP19.41■□□□□ 0.7
PTPRE-201ENST00000254667 BEX3Q00994 111 aa19.41■□□□□ 0.7
PTPRE-201ENST00000254667 ATP6AP1LQ52LC2 224 aa19.41■□□□□ 0.7
PTPRE-201ENST00000254667 PPP1R10Q96QC0 940 aaKnown RBP19.41■□□□□ 0.7
PTPRE-201ENST00000254667 TMEM120AQ9BXJ8 343 aa19.41■□□□□ 0.7
PTPRE-201ENST00000254667 TAS2R13Q9NYV9 303 aa19.41■□□□□ 0.7
PTPRE-201ENST00000254667 UBA2Q9UBT2 640 aaPredicted RBP19.41■□□□□ 0.7
PTPRE-201ENST00000254667 C2CD2Q9Y426 696 aa19.41■□□□□ 0.7
PTPRE-201ENST00000254667 DDHD2O94830 711 aa19.41■□□□□ 0.7
PTPRE-201ENST00000254667 MAP2K5Q13163 448 aa19.41■□□□□ 0.7
PTPRE-201ENST00000254667 BMPR2Q13873 1038 aa19.41■□□□□ 0.7
PTPRE-201ENST00000254667 KCNT2Q6UVM3 1135 aa19.41■□□□□ 0.7
PTPRE-201ENST00000254667 TMC3Q7Z5M5 1100 aa19.41■□□□□ 0.7
PTPRE-201ENST00000254667 DIS3LQ8TF46 1054 aaKnown RBP19.41■□□□□ 0.7
PTPRE-201ENST00000254667 DNAJC19Q96DA6 116 aa19.41■□□□□ 0.7
PTPRE-201ENST00000254667 PGLYRP2Q96PD5 576 aa19.41■□□□□ 0.7
PTPRE-201ENST00000254667 RAB21Q9UL25 225 aa19.41■□□□□ 0.7
PTPRE-201ENST00000254667 ACADMP11310 421 aa19.41■□□□□ 0.7
PTPRE-201ENST00000254667 SOX11P35716 441 aa19.41■□□□□ 0.7
PTPRE-201ENST00000254667 CHI3L1P36222 383 aaPredicted RBP19.41■□□□□ 0.7
PTPRE-201ENST00000254667 CRY2Q49AN0 593 aa19.41■□□□□ 0.7
PTPRE-201ENST00000254667 PPM1LQ5SGD2 360 aa19.41■□□□□ 0.7
PTPRE-201ENST00000254667 TATDN1Q6P1N9 297 aa19.41■□□□□ 0.7
PTPRE-201ENST00000254667 CENPLQ8N0S6 344 aaPredicted RBP19.41■□□□□ 0.7
PTPRE-201ENST00000254667 TSEN34Q9BSV6 310 aaKnown RBP19.41■□□□□ 0.7
PTPRE-201ENST00000254667 TKTL2Q9H0I9 626 aa19.41■□□□□ 0.7
PTPRE-201ENST00000254667 CDH9Q9ULB4 789 aa19.41■□□□□ 0.7
PTPRE-201ENST00000254667 TRIM17Q9Y577 477 aa19.41■□□□□ 0.7
PTPRE-201ENST00000254667 TMEM114B3SHH9 223 aa19.4■□□□□ 0.7
PTPRE-201ENST00000254667 RAD51BO15315 384 aa19.4■□□□□ 0.7
PTPRE-201ENST00000254667 SMIM10L2AP0DMW4 78 aa19.4■□□□□ 0.7
PTPRE-201ENST00000254667 SMIM10L2BP0DMW5 78 aa19.4■□□□□ 0.7
PTPRE-201ENST00000254667 BGNP21810 368 aa19.4■□□□□ 0.7
PTPRE-201ENST00000254667 BDNFP23560 247 aa19.4■□□□□ 0.7
PTPRE-201ENST00000254667 CORO7P57737 925 aa19.4■□□□□ 0.7
PTPRE-201ENST00000254667 APOPT1Q96IL0 206 aa19.4■□□□□ 0.7
PTPRE-201ENST00000254667 AHSPQ9NZD4 102 aa19.4■□□□□ 0.7
PTPRE-201ENST00000254667 ASTN1O14525 1302 aa19.4■□□□□ 0.7
PTPRE-201ENST00000254667 ADCY6O43306 1168 aa19.4■□□□□ 0.7
PTPRE-201ENST00000254667 NQO1P15559 274 aaKnown RBP19.4■□□□□ 0.7
PTPRE-201ENST00000254667 TFE3P19532 575 aaPredicted RBP19.4■□□□□ 0.7
PTPRE-201ENST00000254667 KDELR1P24390 212 aa19.4■□□□□ 0.7
PTPRE-201ENST00000254667 CDK7P50613 346 aa19.4■□□□□ 0.7
PTPRE-201ENST00000254667 CCNG1P51959 295 aa19.4■□□□□ 0.7
PTPRE-201ENST00000254667 CREMQ03060 361 aa19.4■□□□□ 0.7
PTPRE-201ENST00000254667 PARP6Q2NL67 630 aa19.4■□□□□ 0.7
PTPRE-201ENST00000254667 OTOAQ7RTW8 1153 aa19.4■□□□□ 0.7
PTPRE-201ENST00000254667 SCUBE1Q8IWY4 988 aa19.4■□□□□ 0.7
PTPRE-201ENST00000254667 FTHL17Q9BXU8 183 aa19.4■□□□□ 0.7
PTPRE-201ENST00000254667 WDR27A2RRH5 827 aa19.4■□□□□ 0.7
PTPRE-201ENST00000254667 SNTNA6NMZ2 147 aa19.4■□□□□ 0.7
PTPRE-201ENST00000254667 ARHGEF9O43307 516 aa19.4■□□□□ 0.7
PTPRE-201ENST00000254667 FGRP09769 529 aa19.4■□□□□ 0.7
PTPRE-201ENST00000254667 MGAT1P26572 445 aa19.4■□□□□ 0.7
PTPRE-201ENST00000254667 HALP42357 657 aa19.4■□□□□ 0.7
PTPRE-201ENST00000254667 NEK2P51955 445 aa19.4■□□□□ 0.7
PTPRE-201ENST00000254667 CDC16Q13042 620 aa19.4■□□□□ 0.7
PTPRE-201ENST00000254667 DNAAF5Q86Y56 855 aa19.4■□□□□ 0.7
PTPRE-201ENST00000254667 MAF1Q9H063 256 aa19.4■□□□□ 0.7
PTPRE-201ENST00000254667 DNAJC18Q9H819 358 aa19.4■□□□□ 0.7
PTPRE-201ENST00000254667 USP20Q9Y2K6 914 aa19.4■□□□□ 0.7
PTPRE-201ENST00000254667 PBLDP30039 288 aaPredicted RBP19.4■□□□□ 0.7
PTPRE-201ENST00000254667 MRPS35P82673 323 aaKnown RBP19.4■□□□□ 0.7
PTPRE-201ENST00000254667 CDK16Q00536 496 aa19.4■□□□□ 0.7
PTPRE-201ENST00000254667 LRRC55Q6ZSA7 311 aa19.4■□□□□ 0.7
PTPRE-201ENST00000254667 UBDO15205 165 aa19.39■□□□□ 0.7
PTPRE-201ENST00000254667 KLRC4O43908 158 aa19.39■□□□□ 0.7
PTPRE-201ENST00000254667 CYP1A1P04798 512 aaPredicted RBP19.39■□□□□ 0.7
PTPRE-201ENST00000254667 CYP1A2P05177 515 aa19.39■□□□□ 0.7
PTPRE-201ENST00000254667 ATP5BP06576 529 aaKnown RBP19.39■□□□□ 0.7
PTPRE-201ENST00000254667 USP17L7P0C7H9 530 aa19.39■□□□□ 0.7
PTPRE-201ENST00000254667 RASA2Q15283 850 aa19.39■□□□□ 0.7
PTPRE-201ENST00000254667 N4BP2L1Q5TBK1 243 aaPredicted RBP19.39■□□□□ 0.7
PTPRE-201ENST00000254667 ZCCHC9Q8N567 271 aaKnown RBP19.39■□□□□ 0.7
PTPRE-201ENST00000254667 TMEM159Q96B96 161 aa19.39■□□□□ 0.7
PTPRE-201ENST00000254667 ACO2Q99798 780 aaKnown RBP19.39■□□□□ 0.7
PTPRE-201ENST00000254667 DNPEPQ9ULA0 475 aa19.39■□□□□ 0.7
PTPRE-201ENST00000254667 PTPN3P26045 913 aa19.39■□□□□ 0.69
PTPRE-201ENST00000254667 PSEN1P49768 467 aa19.39■□□□□ 0.69
PTPRE-201ENST00000254667 POLR2LP62875 67 aaKnown RBP19.39■□□□□ 0.69
PTPRE-201ENST00000254667 RIN3Q8TB24 985 aa19.39■□□□□ 0.69
PTPRE-201ENST00000254667 JADE3Q92613 823 aa19.39■□□□□ 0.69
PTPRE-201ENST00000254667 ZFP42Q96MM3 310 aa19.39■□□□□ 0.69
PTPRE-201ENST00000254667 GDF3Q9NR23 364 aa19.39■□□□□ 0.69
PTPRE-201ENST00000254667 RGS18Q9NS28 235 aa19.39■□□□□ 0.69
PTPRE-201ENST00000254667 NINJ2Q9NZG7 142 aa19.39■□□□□ 0.69
PTPRE-201ENST00000254667 STARD13Q9Y3M8 1113 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms