RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 IGLV3-10A0A075B6K4 115 aa14.61□□□□□ -0.07
VPS25-201ENST00000253794 PRPSAP2O60256 369 aa14.61□□□□□ -0.07
VPS25-201ENST00000253794 NFATC1O95644 943 aa14.61□□□□□ -0.07
VPS25-201ENST00000253794 IL1R2P27930 398 aa14.61□□□□□ -0.07
VPS25-201ENST00000253794 GDI1P31150 447 aa14.61□□□□□ -0.07
VPS25-201ENST00000253794 NOP2P46087 812 aaKnown RBP14.61□□□□□ -0.07
VPS25-201ENST00000253794 SEMA3BQ13214 749 aa14.61□□□□□ -0.07
VPS25-201ENST00000253794 MESDQ14696 234 aa14.61□□□□□ -0.07
VPS25-201ENST00000253794 BOLA3Q53S33 107 aa14.61□□□□□ -0.07
VPS25-201ENST00000253794 MPP7Q5T2T1 576 aa14.61□□□□□ -0.07
VPS25-201ENST00000253794 MANEALQ5VSG8 457 aa14.61□□□□□ -0.07
VPS25-201ENST00000253794 RNF135Q8IUD6 432 aa14.61□□□□□ -0.07
VPS25-201ENST00000253794 ZNF683Q8IZ20 524 aa14.61□□□□□ -0.07
VPS25-201ENST00000253794 ST13P5Q8NFI4 369 aaPredicted RBP14.61□□□□□ -0.07
VPS25-201ENST00000253794 FAM71BQ8TC56 605 aa14.61□□□□□ -0.07
VPS25-201ENST00000253794 CD101Q93033 1021 aa14.61□□□□□ -0.07
VPS25-201ENST00000253794 SPHK2Q9NRA0 654 aa14.61□□□□□ -0.07
VPS25-201ENST00000253794 TRIM10Q9UDY6 481 aa14.61□□□□□ -0.07
VPS25-201ENST00000253794 HS3ST4Q9Y661 456 aa14.61□□□□□ -0.07
VPS25-201ENST00000253794 ALG6Q9Y672 507 aa14.61□□□□□ -0.07
VPS25-201ENST00000253794 BDP1A6H8Y1 2624 aa14.6□□□□□ -0.07
VPS25-201ENST00000253794 GRID2IPA4D2P6 1211 aa14.6□□□□□ -0.07
VPS25-201ENST00000253794 HOXC11O43248 304 aaPredicted RBP14.6□□□□□ -0.07
VPS25-201ENST00000253794 BUB1O43683 1085 aa14.6□□□□□ -0.07
VPS25-201ENST00000253794 MOCS2O96007 188 aaPredicted RBP14.6□□□□□ -0.07
VPS25-201ENST00000253794 PENKP01210 267 aaPredicted RBP14.6□□□□□ -0.07
VPS25-201ENST00000253794 CYP17A1P05093 508 aa14.6□□□□□ -0.07
VPS25-201ENST00000253794 TCF4P15884 667 aa14.6□□□□□ -0.07
VPS25-201ENST00000253794 TACR2P21452 398 aa14.6□□□□□ -0.07
VPS25-201ENST00000253794 HOXC13P31276 330 aa14.6□□□□□ -0.07
VPS25-201ENST00000253794 SLC6A4P31645 630 aa14.6□□□□□ -0.07
VPS25-201ENST00000253794 HTR7P34969 479 aa14.6□□□□□ -0.07
VPS25-201ENST00000253794 ZNF135P52742 658 aaPredicted RBP14.6□□□□□ -0.07
VPS25-201ENST00000253794 PFKPQ01813 784 aa14.6□□□□□ -0.07
VPS25-201ENST00000253794 RUNX3Q13761 415 aa14.6□□□□□ -0.07
VPS25-201ENST00000253794 DPYSL2Q16555 572 aa14.6□□□□□ -0.07
VPS25-201ENST00000253794 HADHQ16836 314 aaKnown RBP14.6□□□□□ -0.07
VPS25-201ENST00000253794 EFHC2Q5JST6 749 aa14.6□□□□□ -0.07
VPS25-201ENST00000253794 ERMARDQ5T6L9 678 aa14.6□□□□□ -0.07
VPS25-201ENST00000253794 RHBDF2Q6PJF5 856 aa14.6□□□□□ -0.07
VPS25-201ENST00000253794 UBALD2Q8IYN6 164 aa14.6□□□□□ -0.07
VPS25-201ENST00000253794 CPA6Q8N4T0 437 aa14.6□□□□□ -0.07
VPS25-201ENST00000253794 MSANTD3Q96H12 275 aa14.6□□□□□ -0.07
VPS25-201ENST00000253794 SNRNP25Q9BV90 132 aaKnown RBP14.6□□□□□ -0.07
VPS25-201ENST00000253794 RETREG1Q9H6L5 497 aa14.6□□□□□ -0.07
VPS25-201ENST00000253794 BRD9Q9H8M2 597 aa14.6□□□□□ -0.07
VPS25-201ENST00000253794 ECT2Q9H8V3 914 aa14.6□□□□□ -0.07
VPS25-201ENST00000253794 CD320Q9NPF0 282 aa14.6□□□□□ -0.07
VPS25-201ENST00000253794 PYCARDQ9ULZ3 195 aa14.6□□□□□ -0.07
VPS25-201ENST00000253794 NEU3Q9UQ49 428 aa14.6□□□□□ -0.07
VPS25-201ENST00000253794 COL4A3Q01955 1670 aa14.6□□□□□ -0.07
VPS25-201ENST00000253794 MACROD2A1Z1Q3 448 aa14.59□□□□□ -0.07
VPS25-201ENST00000253794 GOLGA6L9A6NEM1 432 aa14.59□□□□□ -0.07
VPS25-201ENST00000253794 DRGXA6NNA5 263 aa14.59□□□□□ -0.07
VPS25-201ENST00000253794 ADH1CP00326 375 aa14.59□□□□□ -0.07
VPS25-201ENST00000253794 KRT7P08729 469 aa14.59□□□□□ -0.07
VPS25-201ENST00000253794 GLULP15104 373 aa14.59□□□□□ -0.07
VPS25-201ENST00000253794 ARSAP15289 507 aa14.59□□□□□ -0.07
VPS25-201ENST00000253794 COMTP21964 271 aa14.59□□□□□ -0.07
VPS25-201ENST00000253794 L1CAMP32004 1257 aa14.59□□□□□ -0.07
VPS25-201ENST00000253794 TAS2R40P59535 323 aa14.59□□□□□ -0.07
VPS25-201ENST00000253794 AUHQ13825 339 aaKnown RBP14.59□□□□□ -0.07
VPS25-201ENST00000253794 DHCR24Q15392 516 aa14.59□□□□□ -0.07
VPS25-201ENST00000253794 GAB4Q2WGN9 574 aa14.59□□□□□ -0.07
VPS25-201ENST00000253794 ITPRIPL2Q3MIP1 535 aa14.59□□□□□ -0.07
VPS25-201ENST00000253794 MPPE1Q53F39 396 aa14.59□□□□□ -0.07
VPS25-201ENST00000253794 TTC39BQ5VTQ0 682 aaPredicted RBP14.59□□□□□ -0.07
VPS25-201ENST00000253794 DAB2IPQ5VWQ8 1189 aa14.59□□□□□ -0.07
VPS25-201ENST00000253794 FYB2Q5VWT5 728 aa14.59□□□□□ -0.07
VPS25-201ENST00000253794 TRIM68Q6AZZ1 485 aa14.59□□□□□ -0.07
VPS25-201ENST00000253794 FBXL22Q6P050 247 aa14.59□□□□□ -0.07
VPS25-201ENST00000253794 SCYL2Q6P3W7 929 aa14.59□□□□□ -0.07
VPS25-201ENST00000253794 VSIG1Q86XK7 387 aa14.59□□□□□ -0.07
VPS25-201ENST00000253794 CPNE8Q86YQ8 564 aa14.59□□□□□ -0.07
VPS25-201ENST00000253794 SYCE1Q8N0S2 351 aa14.59□□□□□ -0.07
VPS25-201ENST00000253794 ZFYVE19Q96K21 471 aa14.59□□□□□ -0.07
VPS25-201ENST00000253794 PRICKLE1Q96MT3 831 aaPredicted RBP14.59□□□□□ -0.07
VPS25-201ENST00000253794 EBF3Q9H4W6 596 aa14.59□□□□□ -0.07
VPS25-201ENST00000253794 TMPRSS4Q9NRS4 437 aa14.59□□□□□ -0.07
VPS25-201ENST00000253794 PPARGC1AQ9UBK2 798 aaKnown RBP14.59□□□□□ -0.07
VPS25-201ENST00000253794 GUCA1BQ9UMX6 200 aa14.59□□□□□ -0.07
VPS25-201ENST00000253794 AP4E1Q9UPM8 1137 aa14.59□□□□□ -0.07
VPS25-201ENST00000253794 CAPN6Q9Y6Q1 641 aa14.59□□□□□ -0.07
VPS25-201ENST00000253794 GOLGA6L7A0A1B0GV03 622 aa14.58□□□□□ -0.08
VPS25-201ENST00000253794 OTOL1A6NHN0 477 aaPredicted RBP14.58□□□□□ -0.08
VPS25-201ENST00000253794 F5H5T6 163 aa14.58□□□□□ -0.08
VPS25-201ENST00000253794 SCAMP3O14828 347 aaKnown RBP14.58□□□□□ -0.08
VPS25-201ENST00000253794 PSTPIP1O43586 416 aa14.58□□□□□ -0.08
VPS25-201ENST00000253794 NARSO43776 548 aaKnown RBP14.58□□□□□ -0.08
VPS25-201ENST00000253794 MOCS3O95396 460 aa14.58□□□□□ -0.08
VPS25-201ENST00000253794 RARAP10276 462 aa14.58□□□□□ -0.08
VPS25-201ENST00000253794 EIF2DP41214 584 aaKnown RBP14.58□□□□□ -0.08
VPS25-201ENST00000253794 HCAR3P49019 387 aa14.58□□□□□ -0.08
VPS25-201ENST00000253794 ARSEP51690 589 aa14.58□□□□□ -0.08
VPS25-201ENST00000253794 GAD2Q05329 585 aa14.58□□□□□ -0.08
VPS25-201ENST00000253794 TNK2Q07912 1038 aa14.58□□□□□ -0.08
VPS25-201ENST00000253794 NR1H3Q13133 447 aa14.58□□□□□ -0.08
VPS25-201ENST00000253794 LY6G5CQ5SRR4 150 aa14.58□□□□□ -0.08
VPS25-201ENST00000253794 RAP1GAP2Q684P5 730 aa14.58□□□□□ -0.08
VPS25-201ENST00000253794 TXNRD3NBQ6F5E7 133 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms