RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 APOC4-APOC2K7ER74 178 aa13.39□□□□□ -0.27
LSM8-201ENST00000249299 PDE2AO00408 941 aaPredicted RBP13.39□□□□□ -0.27
LSM8-201ENST00000249299 KRIT1O00522 736 aa13.39□□□□□ -0.27
LSM8-201ENST00000249299 FGF10O15520 208 aaPredicted RBP13.39□□□□□ -0.27
LSM8-201ENST00000249299 APOC2P02655 101 aa13.39□□□□□ -0.27
LSM8-201ENST00000249299 MYL4P12829 197 aa13.39□□□□□ -0.27
LSM8-201ENST00000249299 HOXB1P14653 301 aaPredicted RBP13.39□□□□□ -0.27
LSM8-201ENST00000249299 TGM2P21980 687 aa13.39□□□□□ -0.27
LSM8-201ENST00000249299 GJC1P36383 396 aa13.39□□□□□ -0.27
LSM8-201ENST00000249299 FNTAP49354 379 aa13.39□□□□□ -0.27
LSM8-201ENST00000249299 TERF1P54274 439 aa13.39□□□□□ -0.27
LSM8-201ENST00000249299 ZNF211Q13398 564 aaPredicted RBP13.39□□□□□ -0.27
LSM8-201ENST00000249299 CCNG2Q16589 344 aa13.39□□□□□ -0.27
LSM8-201ENST00000249299 GLE1Q53GS7 698 aaKnown RBP13.39□□□□□ -0.27
LSM8-201ENST00000249299 ANKRD20A8PQ5CZ79 823 aa13.39□□□□□ -0.27
LSM8-201ENST00000249299 MANEALQ5VSG8 457 aa13.39□□□□□ -0.27
LSM8-201ENST00000249299 SLC9A4Q6AI14 798 aa13.39□□□□□ -0.27
LSM8-201ENST00000249299 ANKRD54Q6NXT1 300 aa13.39□□□□□ -0.27
LSM8-201ENST00000249299 GPR149Q86SP6 731 aa13.39□□□□□ -0.27
LSM8-201ENST00000249299 MIB1Q86YT6 1006 aa13.39□□□□□ -0.27
LSM8-201ENST00000249299 SHKBP1Q8TBC3 707 aa13.39□□□□□ -0.27
LSM8-201ENST00000249299 MS4A14Q96JA4 679 aa13.39□□□□□ -0.27
LSM8-201ENST00000249299 CAPZA3Q96KX2 299 aa13.39□□□□□ -0.27
LSM8-201ENST00000249299 CSPG4P5Q96PW8 444 aa13.39□□□□□ -0.27
LSM8-201ENST00000249299 KCTD15Q96SI1 283 aaPredicted RBP13.39□□□□□ -0.27
LSM8-201ENST00000249299 RNF38Q9H0F5 515 aa13.39□□□□□ -0.27
LSM8-201ENST00000249299 LRRC19Q9H756 370 aa13.39□□□□□ -0.27
LSM8-201ENST00000249299 PIDD1Q9HB75 910 aa13.39□□□□□ -0.27
LSM8-201ENST00000249299 CWC15Q9P013 229 aaKnown RBP13.39□□□□□ -0.27
LSM8-201ENST00000249299 NUDT5Q9UKK9 219 aa13.39□□□□□ -0.27
LSM8-201ENST00000249299 MTCH2Q9Y6C9 303 aa13.39□□□□□ -0.27
LSM8-201ENST00000249299 MTCL1Q9Y4B5 1905 aaKnown RBP13.38□□□□□ -0.27
LSM8-201ENST00000249299 IGLV3-10A0A075B6K4 115 aa13.38□□□□□ -0.27
LSM8-201ENST00000249299 SYNJ2BP-COX16A0A087WUM0 186 aa13.38□□□□□ -0.27
LSM8-201ENST00000249299 A0A1W2PRU2 124 aa13.38□□□□□ -0.27
LSM8-201ENST00000249299 C2orf78A6NCI8 922 aa13.38□□□□□ -0.27
LSM8-201ENST00000249299 WASH4PA8MWX3 477 aa13.38□□□□□ -0.27
LSM8-201ENST00000249299 PI4K2BG5E9Z4 385 aa13.38□□□□□ -0.27
LSM8-201ENST00000249299 I6L893 689 aaPredicted RBP13.38□□□□□ -0.27
LSM8-201ENST00000249299 RFXAPO00287 272 aa13.38□□□□□ -0.27
LSM8-201ENST00000249299 MSI1O43347 362 aaKnown RBP13.38□□□□□ -0.27
LSM8-201ENST00000249299 MOSPD3O75425 235 aa13.38□□□□□ -0.27
LSM8-201ENST00000249299 PAGE1O75459 146 aa13.38□□□□□ -0.27
LSM8-201ENST00000249299 STC2O76061 302 aa13.38□□□□□ -0.27
LSM8-201ENST00000249299 CSPG5O95196 566 aa13.38□□□□□ -0.27
LSM8-201ENST00000249299 MBL2P11226 248 aaPredicted RBP13.38□□□□□ -0.27
LSM8-201ENST00000249299 CHRNA3P32297 505 aa13.38□□□□□ -0.27
LSM8-201ENST00000249299 LMNB2Q03252 620 aa13.38□□□□□ -0.27
LSM8-201ENST00000249299 CA9Q16790 459 aa13.38□□□□□ -0.27
LSM8-201ENST00000249299 C5orf22Q49AR2 442 aa13.38□□□□□ -0.27
LSM8-201ENST00000249299 ZNF697Q5TEC3 545 aa13.38□□□□□ -0.27
LSM8-201ENST00000249299 TXNDC8Q6A555 127 aa13.38□□□□□ -0.27
LSM8-201ENST00000249299 LRRC31Q6UY01 552 aa13.38□□□□□ -0.27
LSM8-201ENST00000249299 RFX8Q6ZV50 586 aa13.38□□□□□ -0.27
LSM8-201ENST00000249299 HTR3DQ70Z44 454 aa13.38□□□□□ -0.27
LSM8-201ENST00000249299 CMTM8Q8IZV2 173 aa13.38□□□□□ -0.27
LSM8-201ENST00000249299 MMGT1Q8N4V1 131 aa13.38□□□□□ -0.27
LSM8-201ENST00000249299 LZTR1Q8N653 840 aa13.38□□□□□ -0.27
LSM8-201ENST00000249299 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.38□□□□□ -0.27
LSM8-201ENST00000249299 ZFRQ96KR1 1074 aaKnown RBP13.38□□□□□ -0.27
LSM8-201ENST00000249299 CARD6Q9BX69 1037 aa13.38□□□□□ -0.27
LSM8-201ENST00000249299 ADAM7Q9H2U9 754 aa13.38□□□□□ -0.27
LSM8-201ENST00000249299 TTYH1Q9H313 450 aaPredicted RBP13.38□□□□□ -0.27
LSM8-201ENST00000249299 SLITRK6Q9H5Y7 841 aa13.38□□□□□ -0.27
LSM8-201ENST00000249299 CATSPERBQ9H7T0 1116 aa13.38□□□□□ -0.27
LSM8-201ENST00000249299 KIF9Q9HAQ2 790 aa13.38□□□□□ -0.27
LSM8-201ENST00000249299 GDE1Q9NZC3 331 aa13.38□□□□□ -0.27
LSM8-201ENST00000249299 COX16Q9P0S2 106 aa13.38□□□□□ -0.27
LSM8-201ENST00000249299 EEF2KO00418 725 aaKnown RBP13.37□□□□□ -0.27
LSM8-201ENST00000249299 APOL1O14791 398 aa13.37□□□□□ -0.27
LSM8-201ENST00000249299 NCAM2O15394 837 aa13.37□□□□□ -0.27
LSM8-201ENST00000249299 ACSL4O60488 711 aa13.37□□□□□ -0.27
LSM8-201ENST00000249299 LRIG2O94898 1065 aa13.37□□□□□ -0.27
LSM8-201ENST00000249299 GLP2RO95838 553 aa13.37□□□□□ -0.27
LSM8-201ENST00000249299 CKMP06732 381 aa13.37□□□□□ -0.27
LSM8-201ENST00000249299 TUBBP07437 444 aa13.37□□□□□ -0.27
LSM8-201ENST00000249299 AVPR1AP37288 418 aa13.37□□□□□ -0.27
LSM8-201ENST00000249299 CCR2P41597 374 aa13.37□□□□□ -0.27
LSM8-201ENST00000249299 TPI1P60174 286 aa13.37□□□□□ -0.27
LSM8-201ENST00000249299 DPYSQ14117 519 aa13.37□□□□□ -0.27
LSM8-201ENST00000249299 SIX1Q15475 284 aaPredicted RBP13.37□□□□□ -0.27
LSM8-201ENST00000249299 PPP6R3Q5H9R7 873 aaPredicted RBP13.37□□□□□ -0.27
LSM8-201ENST00000249299 ADGRF1Q5T601 910 aa13.37□□□□□ -0.27
LSM8-201ENST00000249299 TTC39BQ5VTQ0 682 aaPredicted RBP13.37□□□□□ -0.27
LSM8-201ENST00000249299 CCDC70Q6NSX1 233 aa13.37□□□□□ -0.27
LSM8-201ENST00000249299 MAATS1Q7Z4T9 603 aa13.37□□□□□ -0.27
LSM8-201ENST00000249299 GRASPQ7Z6J2 395 aaPredicted RBP13.37□□□□□ -0.27
LSM8-201ENST00000249299 LRRC49Q8IUZ0 686 aa13.37□□□□□ -0.27
LSM8-201ENST00000249299 FAM217AQ8IXS0 508 aa13.37□□□□□ -0.27
LSM8-201ENST00000249299 PRELID2Q8N945 189 aa13.37□□□□□ -0.27
LSM8-201ENST00000249299 PCDH19Q8TAB3 1148 aa13.37□□□□□ -0.27
LSM8-201ENST00000249299 SLCO2A1Q92959 643 aa13.37□□□□□ -0.27
LSM8-201ENST00000249299 TBC1D31Q96DN5 1066 aa13.37□□□□□ -0.27
LSM8-201ENST00000249299 PRMT1Q99873 361 aaKnown RBP13.37□□□□□ -0.27
LSM8-201ENST00000249299 SLC46A2Q9BY10 475 aa13.37□□□□□ -0.27
LSM8-201ENST00000249299 BRD8Q9H0E9 1235 aa13.37□□□□□ -0.27
LSM8-201ENST00000249299 TRPC7Q9HCX4 862 aa13.37□□□□□ -0.27
LSM8-201ENST00000249299 ANLNQ9NQW6 1124 aa13.37□□□□□ -0.27
LSM8-201ENST00000249299 HCFC1R1Q9NWW0 138 aa13.37□□□□□ -0.27
LSM8-201ENST00000249299 LSM7Q9UK45 103 aaKnown RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms