RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 KLK14Q9P0G3 267 aa22.64■■□□□ 1.22
SMARCD2-201ENST00000225742 IGSF9Q9P2J2 1179 aa22.64■■□□□ 1.22
SMARCD2-201ENST00000225742 RNF103O00237 685 aa22.64■■□□□ 1.21
SMARCD2-201ENST00000225742 FCHO1O14526 889 aa22.64■■□□□ 1.21
SMARCD2-201ENST00000225742 MFSD11O43934 449 aa22.64■■□□□ 1.21
SMARCD2-201ENST00000225742 SNNO75324 88 aaPredicted RBP22.64■■□□□ 1.21
SMARCD2-201ENST00000225742 PTPN1P18031 435 aaKnown RBP22.64■■□□□ 1.21
SMARCD2-201ENST00000225742 GNAZP19086 355 aa22.64■■□□□ 1.21
SMARCD2-201ENST00000225742 CHI3L2Q15782 390 aa22.64■■□□□ 1.21
SMARCD2-201ENST00000225742 ZNF618Q5T7W0 954 aa22.64■■□□□ 1.21
SMARCD2-201ENST00000225742 PYROXD2Q8N2H3 581 aa22.64■■□□□ 1.21
SMARCD2-201ENST00000225742 WNT8BQ93098 351 aa22.64■■□□□ 1.21
SMARCD2-201ENST00000225742 FAM149B1Q96BN6 582 aa22.64■■□□□ 1.21
SMARCD2-201ENST00000225742 LRRC4Q9HBW1 653 aa22.64■■□□□ 1.21
SMARCD2-201ENST00000225742 WDR27A2RRH5 827 aa22.63■■□□□ 1.21
SMARCD2-201ENST00000225742 SOX4Q06945 474 aaPredicted RBP22.63■■□□□ 1.21
SMARCD2-201ENST00000225742 TBCCQ15814 346 aa22.63■■□□□ 1.21
SMARCD2-201ENST00000225742 DCAF6Q58WW2 860 aa22.63■■□□□ 1.21
SMARCD2-201ENST00000225742 MROH9Q5TGP6 573 aa22.63■■□□□ 1.21
SMARCD2-201ENST00000225742 OTUD1Q5VV17 481 aaPredicted RBP22.63■■□□□ 1.21
SMARCD2-201ENST00000225742 MAB21L3Q8N8X9 362 aa22.63■■□□□ 1.21
SMARCD2-201ENST00000225742 NTAN1Q96AB6 310 aa22.63■■□□□ 1.21
SMARCD2-201ENST00000225742 P2RY11Q96G91 374 aa22.63■■□□□ 1.21
SMARCD2-201ENST00000225742 NUDCD1Q96RS6 583 aa22.63■■□□□ 1.21
SMARCD2-201ENST00000225742 CADM1Q9BY67 442 aaKnown RBP22.63■■□□□ 1.21
SMARCD2-201ENST00000225742 BATF3Q9NR55 127 aa22.63■■□□□ 1.21
SMARCD2-201ENST00000225742 IPPQ9Y573 584 aa22.63■■□□□ 1.21
SMARCD2-201ENST00000225742 IQCA1LA6NCM1 817 aa22.62■■□□□ 1.21
SMARCD2-201ENST00000225742 GSC2O15499 205 aa22.62■■□□□ 1.21
SMARCD2-201ENST00000225742 ESRRAP11474 423 aaPredicted RBP22.62■■□□□ 1.21
SMARCD2-201ENST00000225742 GRIA1P42261 906 aa22.62■■□□□ 1.21
SMARCD2-201ENST00000225742 FKBP1BP68106 108 aa22.62■■□□□ 1.21
SMARCD2-201ENST00000225742 DPYSQ14117 519 aa22.62■■□□□ 1.21
SMARCD2-201ENST00000225742 SIX6OS1Q8N1H7 587 aa22.62■■□□□ 1.21
SMARCD2-201ENST00000225742 ARHGAP24Q8N264 748 aa22.62■■□□□ 1.21
SMARCD2-201ENST00000225742 LGMNQ99538 433 aa22.62■■□□□ 1.21
SMARCD2-201ENST00000225742 MIPEPQ99797 713 aa22.62■■□□□ 1.21
SMARCD2-201ENST00000225742 RNF39Q9H2S5 420 aa22.62■■□□□ 1.21
SMARCD2-201ENST00000225742 THAP1Q9NVV9 213 aa22.62■■□□□ 1.21
SMARCD2-201ENST00000225742 DCDC2Q9UHG0 476 aa22.62■■□□□ 1.21
SMARCD2-201ENST00000225742 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.62■■□□□ 1.21
SMARCD2-201ENST00000225742 FAM237BA0A1B0GVD1 139 aa22.61■■□□□ 1.21
SMARCD2-201ENST00000225742 GYG2O15488 501 aa22.61■■□□□ 1.21
SMARCD2-201ENST00000225742 GLRA3O75311 464 aa22.61■■□□□ 1.21
SMARCD2-201ENST00000225742 IBSPP21815 317 aaPredicted RBP22.61■■□□□ 1.21
SMARCD2-201ENST00000225742 HCAR3P49019 387 aa22.61■■□□□ 1.21
SMARCD2-201ENST00000225742 DEUP1Q05D60 604 aa22.61■■□□□ 1.21
SMARCD2-201ENST00000225742 AP1B1Q10567 949 aa22.61■■□□□ 1.21
SMARCD2-201ENST00000225742 WASHC5Q12768 1159 aa22.61■■□□□ 1.21
SMARCD2-201ENST00000225742 STX3Q13277 289 aa22.61■■□□□ 1.21
SMARCD2-201ENST00000225742 INSCQ1MX18 579 aa22.61■■□□□ 1.21
SMARCD2-201ENST00000225742 PACS1Q6VY07 963 aa22.61■■□□□ 1.21
SMARCD2-201ENST00000225742 C4orf50Q6ZRC1 276 aa22.61■■□□□ 1.21
SMARCD2-201ENST00000225742 PDCD7Q8N8D1 485 aaKnown RBP22.61■■□□□ 1.21
SMARCD2-201ENST00000225742 TMEM40Q8WWA1 233 aa22.61■■□□□ 1.21
SMARCD2-201ENST00000225742 ATP2A3Q93084 1043 aa22.61■■□□□ 1.21
SMARCD2-201ENST00000225742 BRD8Q9H0E9 1235 aa22.61■■□□□ 1.21
SMARCD2-201ENST00000225742 CXorf56Q9H5V9 222 aa22.61■■□□□ 1.21
SMARCD2-201ENST00000225742 DENND2DQ9H6A0 471 aaPredicted RBP22.61■■□□□ 1.21
SMARCD2-201ENST00000225742 DCLRE1BQ9H816 532 aa22.61■■□□□ 1.21
SMARCD2-201ENST00000225742 MFHAS1Q9Y4C4 1052 aa22.61■■□□□ 1.21
SMARCD2-201ENST00000225742 CYB561D2O14569 222 aa22.61■■□□□ 1.21
SMARCD2-201ENST00000225742 GABRDO14764 452 aa22.61■■□□□ 1.21
SMARCD2-201ENST00000225742 TPBGLP0DKB5 382 aa22.61■■□□□ 1.21
SMARCD2-201ENST00000225742 ZNF135P52742 658 aaPredicted RBP22.61■■□□□ 1.21
SMARCD2-201ENST00000225742 SCAPQ12770 1279 aa22.61■■□□□ 1.21
SMARCD2-201ENST00000225742 IFRD2Q12894 506 aaPredicted RBP22.61■■□□□ 1.21
SMARCD2-201ENST00000225742 FRG1Q14331 258 aaKnown RBP22.61■■□□□ 1.21
SMARCD2-201ENST00000225742 CMPK2Q5EBM0 449 aa22.61■■□□□ 1.21
SMARCD2-201ENST00000225742 CASC4Q6P4E1 433 aa22.61■■□□□ 1.21
SMARCD2-201ENST00000225742 RFX8Q6ZV50 586 aa22.61■■□□□ 1.21
SMARCD2-201ENST00000225742 TLK2Q86UE8 772 aa22.61■■□□□ 1.21
SMARCD2-201ENST00000225742 SMG8Q8ND04 991 aaKnown RBP22.61■■□□□ 1.21
SMARCD2-201ENST00000225742 SMC1BQ8NDV3 1235 aa22.61■■□□□ 1.21
SMARCD2-201ENST00000225742 FBXO6Q9NRD1 293 aaPredicted RBP22.61■■□□□ 1.21
SMARCD2-201ENST00000225742 SDAD1Q9NVU7 687 aaKnown RBP eCLIP22.61■■□□□ 1.21
SMARCD2-201ENST00000225742 TSC2P49815 1807 aa22.6■■□□□ 1.21
SMARCD2-201ENST00000225742 C9IYK1 514 aa22.6■■□□□ 1.21
SMARCD2-201ENST00000225742 M0QYT0 321 aa22.6■■□□□ 1.21
SMARCD2-201ENST00000225742 EEF2KO00418 725 aaKnown RBP22.6■■□□□ 1.21
SMARCD2-201ENST00000225742 NCAM2O15394 837 aa22.6■■□□□ 1.21
SMARCD2-201ENST00000225742 CPT1AP50416 773 aa22.6■■□□□ 1.21
SMARCD2-201ENST00000225742 GJA9P57773 515 aa22.6■■□□□ 1.21
SMARCD2-201ENST00000225742 SPANXN3Q5MJ09 141 aa22.6■■□□□ 1.21
SMARCD2-201ENST00000225742 FAM182AQ5T1J6 154 aa22.6■■□□□ 1.21
SMARCD2-201ENST00000225742 ARNTL2Q8WYA1 636 aa22.6■■□□□ 1.21
SMARCD2-201ENST00000225742 MECRQ9BV79 373 aa22.6■■□□□ 1.21
SMARCD2-201ENST00000225742 KATNAL1Q9BW62 490 aa22.6■■□□□ 1.21
SMARCD2-201ENST00000225742 STN1Q9H668 368 aaKnown RBP22.6■■□□□ 1.21
SMARCD2-201ENST00000225742 XPNPEP3Q9NQH7 507 aa22.6■■□□□ 1.21
SMARCD2-201ENST00000225742 RRN3Q9NYV6 651 aa22.6■■□□□ 1.21
SMARCD2-201ENST00000225742 NKX1-2Q9UD57 310 aaPredicted RBP22.6■■□□□ 1.21
SMARCD2-201ENST00000225742 SORCS3Q9UPU3 1222 aa22.6■■□□□ 1.21
SMARCD2-201ENST00000225742 Q9Y3F1 56 aa22.6■■□□□ 1.21
SMARCD2-201ENST00000225742 DCLK1O15075 740 aa22.59■■□□□ 1.21
SMARCD2-201ENST00000225742 GNAT1P11488 350 aa22.59■■□□□ 1.21
SMARCD2-201ENST00000225742 MGAT1P26572 445 aa22.59■■□□□ 1.21
SMARCD2-201ENST00000225742 CLNS1AP54105 237 aaKnown RBP22.59■■□□□ 1.21
SMARCD2-201ENST00000225742 HIC1Q14526 733 aa22.59■■□□□ 1.21
SMARCD2-201ENST00000225742 CRYMQ14894 314 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms