RNA–Protein interactions for RNA: ENST00000219837.11

KNOP1-201, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene KNOP1, Length 6,432 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-201ENST00000219837 RTFDC1Q9BY42 306 aaPredicted RBP11.35□□□□□ -0.59
KNOP1-201ENST00000219837 DPY30Q9C005 99 aa11.35□□□□□ -0.59
KNOP1-201ENST00000219837 SPRTNQ9H040 489 aaPredicted RBP11.35□□□□□ -0.59
KNOP1-201ENST00000219837 FAM153AQ9UHL3 310 aa11.35□□□□□ -0.59
KNOP1-201ENST00000219837 TSPAN16Q9UKR8 245 aa11.35□□□□□ -0.59
KNOP1-201ENST00000219837 BARX2Q9UMQ3 279 aaPredicted RBP11.35□□□□□ -0.59
KNOP1-201ENST00000219837 LSM8O95777 96 aaKnown RBP11.35□□□□□ -0.59
KNOP1-201ENST00000219837 SLC26A2P50443 739 aa11.35□□□□□ -0.59
KNOP1-201ENST00000219837 MARSP56192 900 aaKnown RBP11.35□□□□□ -0.59
KNOP1-201ENST00000219837 BCL2L1Q07817 233 aa11.35□□□□□ -0.59
KNOP1-201ENST00000219837 POM121L1PQ3SYA9 428 aa11.35□□□□□ -0.59
KNOP1-201ENST00000219837 MARC1Q5VT66 337 aa11.35□□□□□ -0.59
KNOP1-201ENST00000219837 C19orf18Q8NEA5 215 aa11.35□□□□□ -0.59
KNOP1-201ENST00000219837 ZSWIM2Q8NEG5 633 aa11.35□□□□□ -0.59
KNOP1-201ENST00000219837 POMKQ9H5K3 350 aa11.35□□□□□ -0.59
KNOP1-201ENST00000219837 EFCAB1Q9HAE3 211 aa11.35□□□□□ -0.59
KNOP1-201ENST00000219837 KLHL1Q9NR64 748 aa11.35□□□□□ -0.59
KNOP1-201ENST00000219837 PRKAG3Q9UGI9 489 aa11.35□□□□□ -0.59
KNOP1-201ENST00000219837 GTF3C4Q9UKN8 822 aa11.35□□□□□ -0.59
KNOP1-201ENST00000219837 TEX28O15482 410 aa11.35□□□□□ -0.59
KNOP1-201ENST00000219837 VHLP40337 213 aa11.35□□□□□ -0.59
KNOP1-201ENST00000219837 PSMC6P62333 389 aa11.35□□□□□ -0.59
KNOP1-201ENST00000219837 RCN1Q15293 331 aa11.35□□□□□ -0.59
KNOP1-201ENST00000219837 DGKKQ5KSL6 1271 aa11.35□□□□□ -0.59
KNOP1-201ENST00000219837 SPANXN3Q5MJ09 141 aa11.35□□□□□ -0.59
KNOP1-201ENST00000219837 DSG4Q86SJ6 1040 aa11.35□□□□□ -0.59
KNOP1-201ENST00000219837 LRRC34Q8IZ02 419 aa11.35□□□□□ -0.59
KNOP1-201ENST00000219837 OSCP1Q8WVF1 389 aa11.35□□□□□ -0.59
KNOP1-201ENST00000219837 MRPL9Q9BYD2 267 aaKnown RBP11.35□□□□□ -0.59
KNOP1-201ENST00000219837 PARVBQ9HBI1 364 aa11.35□□□□□ -0.59
KNOP1-201ENST00000219837 MCM8Q9UJA3 840 aa11.35□□□□□ -0.59
KNOP1-201ENST00000219837 ABCA9Q8IUA7 1624 aa11.35□□□□□ -0.59
KNOP1-201ENST00000219837 REREQ9P2R6 1566 aa11.35□□□□□ -0.59
KNOP1-201ENST00000219837 MEI4A8MW99 385 aa11.35□□□□□ -0.59
KNOP1-201ENST00000219837 H3BRB1 525 aa11.35□□□□□ -0.59
KNOP1-201ENST00000219837 O00370 1275 aa11.35□□□□□ -0.59
KNOP1-201ENST00000219837 HERVK_113P62684 666 aa11.35□□□□□ -0.59
KNOP1-201ENST00000219837 BEX3Q00994 111 aa11.35□□□□□ -0.59
KNOP1-201ENST00000219837 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.35□□□□□ -0.59
KNOP1-201ENST00000219837 ELAVL2Q12926 359 aaKnown RBP11.35□□□□□ -0.59
KNOP1-201ENST00000219837 MAD2L1Q13257 205 aaPredicted RBP11.35□□□□□ -0.59
KNOP1-201ENST00000219837 ACVR2BQ13705 512 aa11.35□□□□□ -0.59
KNOP1-201ENST00000219837 MACC1Q6ZN28 852 aa11.35□□□□□ -0.59
KNOP1-201ENST00000219837 KCNMB4Q86W47 210 aa11.35□□□□□ -0.59
KNOP1-201ENST00000219837 UXS1Q8NBZ7 420 aa11.35□□□□□ -0.59
KNOP1-201ENST00000219837 TUT1Q9H6E5 874 aaKnown RBP11.35□□□□□ -0.59
KNOP1-201ENST00000219837 CYP3A43Q9HB55 503 aa11.35□□□□□ -0.59
KNOP1-201ENST00000219837 HMX1Q9NP08 348 aaPredicted RBP11.35□□□□□ -0.59
KNOP1-201ENST00000219837 MRPL39Q9NYK5 338 aaKnown RBP11.35□□□□□ -0.59
KNOP1-201ENST00000219837 OR6A2O95222 327 aa11.35□□□□□ -0.59
KNOP1-201ENST00000219837 AKR1A1P14550 325 aa11.35□□□□□ -0.59
KNOP1-201ENST00000219837 AQP5P55064 265 aa11.35□□□□□ -0.59
KNOP1-201ENST00000219837 PTPN11Q06124 597 aaPredicted RBP11.35□□□□□ -0.59
KNOP1-201ENST00000219837 XRCC4Q13426 336 aa11.35□□□□□ -0.59
KNOP1-201ENST00000219837 DDR2Q16832 855 aa11.35□□□□□ -0.59
KNOP1-201ENST00000219837 SCUBE1Q8IWY4 988 aa11.35□□□□□ -0.59
KNOP1-201ENST00000219837 ENGASEQ8NFI3 743 aa11.35□□□□□ -0.59
KNOP1-201ENST00000219837 SLC16A10Q8TF71 515 aa11.35□□□□□ -0.59
KNOP1-201ENST00000219837 PPP1R16AQ96I34 528 aa11.35□□□□□ -0.59
KNOP1-201ENST00000219837 CNPY3Q9BT09 278 aa11.35□□□□□ -0.59
KNOP1-201ENST00000219837 ZCCHC2Q9C0B9 1178 aaKnown RBP11.35□□□□□ -0.59
KNOP1-201ENST00000219837 SERHL2Q9H4I8 314 aa11.35□□□□□ -0.59
KNOP1-201ENST00000219837 SERHLQ9NQF3 203 aa11.35□□□□□ -0.59
KNOP1-201ENST00000219837 SEC22BO75396 215 aa11.35□□□□□ -0.59
KNOP1-201ENST00000219837 PSMC3P17980 439 aa11.35□□□□□ -0.59
KNOP1-201ENST00000219837 MGAT1P26572 445 aa11.35□□□□□ -0.59
KNOP1-201ENST00000219837 GMCL1Q96IK5 515 aa11.35□□□□□ -0.59
KNOP1-201ENST00000219837 SH3GL1Q99961 368 aa11.35□□□□□ -0.59
KNOP1-201ENST00000219837 MRPS26Q9BYN8 205 aaKnown RBP11.35□□□□□ -0.59
KNOP1-201ENST00000219837 SEMA6BQ9H3T3 888 aa11.35□□□□□ -0.59
KNOP1-201ENST00000219837 KLHL28Q9NXS3 571 aa11.35□□□□□ -0.59
KNOP1-201ENST00000219837 SH3BGRLO75368 114 aa11.34□□□□□ -0.59
KNOP1-201ENST00000219837 FGRP09769 529 aa11.34□□□□□ -0.59
KNOP1-201ENST00000219837 CD44P16070 742 aaKnown RBP11.34□□□□□ -0.59
KNOP1-201ENST00000219837 LBPP18428 481 aa11.34□□□□□ -0.59
KNOP1-201ENST00000219837 CCR4P51679 360 aa11.34□□□□□ -0.59
KNOP1-201ENST00000219837 IL5RAQ01344 420 aa11.34□□□□□ -0.59
KNOP1-201ENST00000219837 MAPK7Q13164 816 aa11.34□□□□□ -0.59
KNOP1-201ENST00000219837 CBWD6Q4V339 395 aa11.34□□□□□ -0.59
KNOP1-201ENST00000219837 RIPOR1Q6ZS17 1223 aa11.34□□□□□ -0.59
KNOP1-201ENST00000219837 SRLQ86TD4 932 aa11.34□□□□□ -0.59
KNOP1-201ENST00000219837 SAMD3Q8N6K7 520 aa11.34□□□□□ -0.59
KNOP1-201ENST00000219837 WDR36Q8NI36 951 aaKnown RBP11.34□□□□□ -0.59
KNOP1-201ENST00000219837 UTP15Q8TED0 518 aaKnown RBP11.34□□□□□ -0.59
KNOP1-201ENST00000219837 TATDN2Q93075 761 aa11.34□□□□□ -0.59
KNOP1-201ENST00000219837 PGAM1P18669 254 aa11.34□□□□□ -0.59
KNOP1-201ENST00000219837 C21orf59P57076 290 aa11.34□□□□□ -0.59
KNOP1-201ENST00000219837 RAB14P61106 215 aa11.34□□□□□ -0.59
KNOP1-201ENST00000219837 MTA1Q13330 715 aa11.34□□□□□ -0.59
KNOP1-201ENST00000219837 MAP1SQ66K74 1059 aaPredicted RBP11.34□□□□□ -0.59
KNOP1-201ENST00000219837 GRIN3AQ8TCU5 1115 aa11.34□□□□□ -0.59
KNOP1-201ENST00000219837 VPS33AQ96AX1 596 aa11.34□□□□□ -0.59
KNOP1-201ENST00000219837 SH3GL2Q99962 352 aa11.34□□□□□ -0.59
KNOP1-201ENST00000219837 MIR1-1HGQ9H1L0 117 aa11.34□□□□□ -0.59
KNOP1-201ENST00000219837 TAGLN3Q9UI15 199 aa11.34□□□□□ -0.59
KNOP1-201ENST00000219837 TRAV19A0A0A6YYK7 116 aa11.34□□□□□ -0.59
KNOP1-201ENST00000219837 DDTLA6NHG4 134 aaPredicted RBP11.34□□□□□ -0.59
KNOP1-201ENST00000219837 MPP3Q13368 585 aa11.34□□□□□ -0.59
KNOP1-201ENST00000219837 BMPR2Q13873 1038 aa11.34□□□□□ -0.59
KNOP1-201ENST00000219837 IKBKEQ14164 716 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms