RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 HS3ST4Q9Y661 456 aa28.22■■■□□ 2.11
CHMP4B-201ENST00000217402 MARCKSL1P49006 195 aa28.21■■■□□ 2.11
CHMP4B-201ENST00000217402 AIF1P55008 147 aa28.21■■■□□ 2.11
CHMP4B-201ENST00000217402 CA9Q16790 459 aa28.21■■■□□ 2.11
CHMP4B-201ENST00000217402 BOLA3Q53S33 107 aa28.21■■■□□ 2.11
CHMP4B-201ENST00000217402 MS4A13Q5J8X5 152 aa28.21■■■□□ 2.11
CHMP4B-201ENST00000217402 CHSY1Q86X52 802 aa28.21■■■□□ 2.11
CHMP4B-201ENST00000217402 MFSD6LQ8IWD5 586 aa28.21■■■□□ 2.11
CHMP4B-201ENST00000217402 YAF2Q8IY57 180 aa28.21■■■□□ 2.11
CHMP4B-201ENST00000217402 CD101Q93033 1021 aa28.21■■■□□ 2.11
CHMP4B-201ENST00000217402 ZFYVE19Q96K21 471 aa28.21■■■□□ 2.11
CHMP4B-201ENST00000217402 HAPLN3Q96S86 360 aa28.21■■■□□ 2.11
CHMP4B-201ENST00000217402 DHX35Q9H5Z1 703 aaKnown RBP28.21■■■□□ 2.11
CHMP4B-201ENST00000217402 ZNF510Q9Y2H8 683 aa28.21■■■□□ 2.11
CHMP4B-201ENST00000217402 LATS1O95835 1130 aa28.21■■■□□ 2.11
CHMP4B-201ENST00000217402 KRT7P08729 469 aa28.21■■■□□ 2.11
CHMP4B-201ENST00000217402 DNA2P51530 1060 aa28.21■■■□□ 2.11
CHMP4B-201ENST00000217402 FAM133BQ5BKY9 247 aaKnown RBP28.21■■■□□ 2.11
CHMP4B-201ENST00000217402 RFWD3Q6PCD5 774 aa28.21■■■□□ 2.11
CHMP4B-201ENST00000217402 KRT35Q92764 455 aa28.21■■■□□ 2.11
CHMP4B-201ENST00000217402 AZIN2Q96A70 460 aa28.21■■■□□ 2.11
CHMP4B-201ENST00000217402 ASIC4Q96FT7 647 aa28.21■■■□□ 2.11
CHMP4B-201ENST00000217402 LINC00597Q9H2U6 94 aa28.21■■■□□ 2.11
CHMP4B-201ENST00000217402 THG1LQ9NWX6 298 aaKnown RBP28.21■■■□□ 2.11
CHMP4B-201ENST00000217402 DUS2Q9NX74 493 aaKnown RBP28.21■■■□□ 2.11
CHMP4B-201ENST00000217402 TRDMT1O14717 391 aaKnown RBP28.2■■■□□ 2.1
CHMP4B-201ENST00000217402 PSMC3P17980 439 aa28.2■■■□□ 2.1
CHMP4B-201ENST00000217402 SLC6A4P31645 630 aa28.2■■■□□ 2.1
CHMP4B-201ENST00000217402 MTA1Q13330 715 aa28.2■■■□□ 2.1
CHMP4B-201ENST00000217402 ADGRF1Q5T601 910 aa28.2■■■□□ 2.1
CHMP4B-201ENST00000217402 TRIM68Q6AZZ1 485 aa28.2■■■□□ 2.1
CHMP4B-201ENST00000217402 POLNQ7Z5Q5 900 aa28.2■■■□□ 2.1
CHMP4B-201ENST00000217402 ADHFE1Q8IWW8 467 aa28.2■■■□□ 2.1
CHMP4B-201ENST00000217402 SLC35F6Q8N357 371 aa28.2■■■□□ 2.1
CHMP4B-201ENST00000217402 ATXN2LQ8WWM7 1075 aaKnown RBP28.2■■■□□ 2.1
CHMP4B-201ENST00000217402 TBC1D14Q9P2M4 693 aa28.2■■■□□ 2.1
CHMP4B-201ENST00000217402 PSTPIP1O43586 416 aa28.19■■■□□ 2.1
CHMP4B-201ENST00000217402 ASGR2P07307 311 aa28.19■■■□□ 2.1
CHMP4B-201ENST00000217402 IFNAR2P48551 515 aa28.19■■■□□ 2.1
CHMP4B-201ENST00000217402 FCHO2Q0JRZ9 810 aa28.19■■■□□ 2.1
CHMP4B-201ENST00000217402 LRRC38Q5VT99 294 aa28.19■■■□□ 2.1
CHMP4B-201ENST00000217402 DEPDC1BQ8WUY9 529 aa28.19■■■□□ 2.1
CHMP4B-201ENST00000217402 OSCP1Q8WVF1 389 aa28.19■■■□□ 2.1
CHMP4B-201ENST00000217402 TEKT4Q8WW24 435 aa28.19■■■□□ 2.1
CHMP4B-201ENST00000217402 KCNK12Q9HB15 430 aa28.19■■■□□ 2.1
CHMP4B-201ENST00000217402 OR12D3Q9UGF7 316 aa28.19■■■□□ 2.1
CHMP4B-201ENST00000217402 STOML2Q9UJZ1 356 aa28.19■■■□□ 2.1
CHMP4B-201ENST00000217402 LOC730098B7Z3J9 87 aa28.18■■■□□ 2.1
CHMP4B-201ENST00000217402 FAM72CH0Y354 149 aa28.18■■■□□ 2.1
CHMP4B-201ENST00000217402 SLC9A3R1O14745 358 aaPredicted RBP28.18■■■□□ 2.1
CHMP4B-201ENST00000217402 TSPAN3O60637 253 aa28.18■■■□□ 2.1
CHMP4B-201ENST00000217402 TACR2P21452 398 aa28.18■■■□□ 2.1
CHMP4B-201ENST00000217402 CTNNA1P35221 906 aaKnown RBP28.18■■■□□ 2.1
CHMP4B-201ENST00000217402 GNG11P61952 73 aa28.18■■■□□ 2.1
CHMP4B-201ENST00000217402 ZP2Q05996 745 aa28.18■■■□□ 2.1
CHMP4B-201ENST00000217402 PPP6R3Q5H9R7 873 aaPredicted RBP28.18■■■□□ 2.1
CHMP4B-201ENST00000217402 FAM72AQ5TYM5 149 aa28.18■■■□□ 2.1
CHMP4B-201ENST00000217402 FAM72DQ6L9T8 149 aa28.18■■■□□ 2.1
CHMP4B-201ENST00000217402 C14orf80Q86SX3 495 aa28.18■■■□□ 2.1
CHMP4B-201ENST00000217402 ZSCAN30Q86W11 494 aa28.18■■■□□ 2.1
CHMP4B-201ENST00000217402 FAM72BQ86X60 149 aa28.18■■■□□ 2.1
CHMP4B-201ENST00000217402 KCTD15Q96SI1 283 aaPredicted RBP28.18■■■□□ 2.1
CHMP4B-201ENST00000217402 PRMT1Q99873 361 aaKnown RBP28.18■■■□□ 2.1
CHMP4B-201ENST00000217402 VANGL2Q9ULK5 521 aa28.18■■■□□ 2.1
CHMP4B-201ENST00000217402 SRGAP2O75044 1071 aa28.18■■■□□ 2.1
CHMP4B-201ENST00000217402 KRT1P04264 644 aa28.18■■■□□ 2.1
CHMP4B-201ENST00000217402 GDI1P31150 447 aa28.18■■■□□ 2.1
CHMP4B-201ENST00000217402 MLLT6P55198 1093 aaPredicted RBP28.18■■■□□ 2.1
CHMP4B-201ENST00000217402 AUHQ13825 339 aaKnown RBP28.18■■■□□ 2.1
CHMP4B-201ENST00000217402 PSTKQ8IV42 348 aaKnown RBP28.18■■■□□ 2.1
CHMP4B-201ENST00000217402 LGI2Q8N0V4 545 aa28.18■■■□□ 2.1
CHMP4B-201ENST00000217402 MYEOVQ96EZ4 313 aa28.18■■■□□ 2.1
CHMP4B-201ENST00000217402 DDX50Q9BQ39 737 aaKnown RBP28.18■■■□□ 2.1
CHMP4B-201ENST00000217402 TRMT61BQ9BVS5 477 aaKnown RBP28.18■■■□□ 2.1
CHMP4B-201ENST00000217402 OSBPL2Q9H1P3 480 aa28.18■■■□□ 2.1
CHMP4B-201ENST00000217402 PRKAG3Q9UGI9 489 aa28.18■■■□□ 2.1
CHMP4B-201ENST00000217402 SBDSQ9Y3A5 250 aaKnown RBP eCLIP28.18■■■□□ 2.1
CHMP4B-201ENST00000217402 F5H5T6 163 aa28.17■■■□□ 2.1
CHMP4B-201ENST00000217402 CREB3O43889 395 aa28.17■■■□□ 2.1
CHMP4B-201ENST00000217402 KRT81Q14533 505 aa28.17■■■□□ 2.1
CHMP4B-201ENST00000217402 TPGS1Q6ZTW0 290 aa28.17■■■□□ 2.1
CHMP4B-201ENST00000217402 FAM217AQ8IXS0 508 aa28.17■■■□□ 2.1
CHMP4B-201ENST00000217402 C1orf74Q96LT6 269 aa28.17■■■□□ 2.1
CHMP4B-201ENST00000217402 ASB2Q96Q27 587 aa28.17■■■□□ 2.1
CHMP4B-201ENST00000217402 CCDC66A2RUB6 948 aa28.16■■■□□ 2.1
CHMP4B-201ENST00000217402 ARSAP15289 507 aa28.16■■■□□ 2.1
CHMP4B-201ENST00000217402 MSNP26038 577 aaKnown RBP28.16■■■□□ 2.1
CHMP4B-201ENST00000217402 CTNNA2P26232 953 aa28.16■■■□□ 2.1
CHMP4B-201ENST00000217402 L1CAMP32004 1257 aa28.16■■■□□ 2.1
CHMP4B-201ENST00000217402 CHKAP35790 457 aa28.16■■■□□ 2.1
CHMP4B-201ENST00000217402 CDH6P55285 790 aa28.16■■■□□ 2.1
CHMP4B-201ENST00000217402 DPYSL2Q16555 572 aa28.16■■■□□ 2.1
CHMP4B-201ENST00000217402 EML3Q32P44 896 aa28.16■■■□□ 2.1
CHMP4B-201ENST00000217402 MEI1Q5TIA1 1274 aa28.16■■■□□ 2.1
CHMP4B-201ENST00000217402 FBXL22Q6P050 247 aa28.16■■■□□ 2.1
CHMP4B-201ENST00000217402 KIAA1958Q8N8K9 716 aa28.16■■■□□ 2.1
CHMP4B-201ENST00000217402 KCTD6Q8NC69 237 aa28.16■■■□□ 2.1
CHMP4B-201ENST00000217402 BHMTQ93088 406 aa28.16■■■□□ 2.1
CHMP4B-201ENST00000217402 OTUB2Q96DC9 234 aa28.16■■■□□ 2.1
CHMP4B-201ENST00000217402 PRICKLE1Q96MT3 831 aaPredicted RBP28.16■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms