RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 C6orf89Q6UWU4 347 aa30.63■■■□□ 2.49
PABPN1-201ENST00000216727 ZNF534Q76KX8 674 aa30.63■■■□□ 2.49
PABPN1-201ENST00000216727 YTHDF3Q7Z739 585 aaKnown RBP30.63■■■□□ 2.49
PABPN1-201ENST00000216727 DCAKDQ8WVC6 231 aa30.63■■■□□ 2.49
PABPN1-201ENST00000216727 P2RY11Q96G91 374 aa30.63■■■□□ 2.49
PABPN1-201ENST00000216727 XAB2Q9HCS7 855 aaKnown RBP30.63■■■□□ 2.49
PABPN1-201ENST00000216727 SSU72Q9NP77 194 aaKnown RBP30.63■■■□□ 2.49
PABPN1-201ENST00000216727 AMHP03971 560 aa30.63■■■□□ 2.49
PABPN1-201ENST00000216727 YWHAGP61981 247 aaKnown RBP eCLIP30.63■■■□□ 2.49
PABPN1-201ENST00000216727 TAC4Q86UU9 113 aa30.63■■■□□ 2.49
PABPN1-201ENST00000216727 CACNA2D3Q8IZS8 1091 aa30.63■■■□□ 2.49
PABPN1-201ENST00000216727 PRDM12Q9H4Q4 367 aa30.63■■■□□ 2.49
PABPN1-201ENST00000216727 IGLV3-25P01717 112 aa30.62■■■□□ 2.49
PABPN1-201ENST00000216727 GSTA2P09210 222 aa30.62■■■□□ 2.49
PABPN1-201ENST00000216727 STX2P32856 288 aa30.62■■■□□ 2.49
PABPN1-201ENST00000216727 AP1B1Q10567 949 aa30.62■■■□□ 2.49
PABPN1-201ENST00000216727 DQX1Q8TE96 717 aaKnown RBP30.62■■■□□ 2.49
PABPN1-201ENST00000216727 MRRFQ96E11 262 aaKnown RBP30.62■■■□□ 2.49
PABPN1-201ENST00000216727 TKTL2Q9H0I9 626 aa30.62■■■□□ 2.49
PABPN1-201ENST00000216727 ZNF638Q14966 1978 aaKnown RBP30.62■■■□□ 2.49
PABPN1-201ENST00000216727 TNFRSF10BO14763 440 aa30.61■■■□□ 2.49
PABPN1-201ENST00000216727 NCAM2O15394 837 aa30.61■■■□□ 2.49
PABPN1-201ENST00000216727 EIF4EBP2Q13542 120 aaPredicted RBP30.61■■■□□ 2.49
PABPN1-201ENST00000216727 PIGWQ7Z7B1 504 aa30.61■■■□□ 2.49
PABPN1-201ENST00000216727 SCAMP5Q8TAC9 235 aa30.61■■■□□ 2.49
PABPN1-201ENST00000216727 NSRP1Q9H0G5 558 aaKnown RBP30.61■■■□□ 2.49
PABPN1-201ENST00000216727 ZCWPW1Q9H0M4 648 aa30.61■■■□□ 2.49
PABPN1-201ENST00000216727 ELAC1Q9H777 363 aaKnown RBP30.61■■■□□ 2.49
PABPN1-201ENST00000216727 ZC3H7BQ9UGR2 993 aaKnown RBP30.61■■■□□ 2.49
PABPN1-201ENST00000216727 RNF103O00237 685 aa30.61■■■□□ 2.49
PABPN1-201ENST00000216727 VIMP08670 466 aaKnown RBP30.61■■■□□ 2.49
PABPN1-201ENST00000216727 OR1G1P47890 313 aa30.61■■■□□ 2.49
PABPN1-201ENST00000216727 CDK7P50613 346 aa30.61■■■□□ 2.49
PABPN1-201ENST00000216727 SLC5A3P53794 718 aa30.61■■■□□ 2.49
PABPN1-201ENST00000216727 CORO7P57737 925 aa30.61■■■□□ 2.49
PABPN1-201ENST00000216727 SARNPP82979 210 aaKnown RBP30.61■■■□□ 2.49
PABPN1-201ENST00000216727 DENND1AQ8TEH3 1009 aa30.61■■■□□ 2.49
PABPN1-201ENST00000216727 MZB1Q8WU39 189 aa30.61■■■□□ 2.49
PABPN1-201ENST00000216727 EPAS1Q99814 870 aa30.61■■■□□ 2.49
PABPN1-201ENST00000216727 EIF2B3Q9NR50 452 aaKnown RBP30.61■■■□□ 2.49
PABPN1-201ENST00000216727 BRCA2P51587 3418 aa30.6■■■□□ 2.49
PABPN1-201ENST00000216727 TRDMT1O14717 391 aaKnown RBP30.6■■■□□ 2.49
PABPN1-201ENST00000216727 FAM43BQ6ZT52 329 aaPredicted RBP30.6■■■□□ 2.49
PABPN1-201ENST00000216727 DENND5BQ6ZUT9 1274 aa30.6■■■□□ 2.49
PABPN1-201ENST00000216727 DCP1BQ8IZD4 617 aaKnown RBP30.6■■■□□ 2.49
PABPN1-201ENST00000216727 SLC44A1Q8WWI5 657 aa30.6■■■□□ 2.49
PABPN1-201ENST00000216727 FAM193BQ96PV7 902 aaPredicted RBP30.6■■■□□ 2.49
PABPN1-201ENST00000216727 BRD8Q9H0E9 1235 aa30.6■■■□□ 2.49
PABPN1-201ENST00000216727 ABCC13Q9NSE7 274 aa30.6■■■□□ 2.49
PABPN1-201ENST00000216727 OR12D3Q9UGF7 316 aa30.6■■■□□ 2.49
PABPN1-201ENST00000216727 FKTNO75072 461 aa30.59■■■□□ 2.49
PABPN1-201ENST00000216727 MLNP12872 115 aa30.59■■■□□ 2.49
PABPN1-201ENST00000216727 GRIK1P39086 918 aa30.59■■■□□ 2.49
PABPN1-201ENST00000216727 TAX1BP1Q86VP1 789 aa30.59■■■□□ 2.49
PABPN1-201ENST00000216727 COLGALT1Q8NBJ5 622 aa30.59■■■□□ 2.49
PABPN1-201ENST00000216727 CCNYQ8ND76 341 aa30.59■■■□□ 2.49
PABPN1-201ENST00000216727 SIGLEC10Q96LC7 697 aa30.59■■■□□ 2.49
PABPN1-201ENST00000216727 MAGEB18Q96M61 343 aa30.59■■■□□ 2.49
PABPN1-201ENST00000216727 KIF9Q9HAQ2 790 aa30.59■■■□□ 2.49
PABPN1-201ENST00000216727 NR2E3Q9Y5X4 410 aa30.59■■■□□ 2.49
PABPN1-201ENST00000216727 C1QAP02745 245 aa30.59■■■□□ 2.49
PABPN1-201ENST00000216727 CYP2C18P33260 490 aa30.59■■■□□ 2.49
PABPN1-201ENST00000216727 APLP1P51693 650 aa30.59■■■□□ 2.49
PABPN1-201ENST00000216727 WASHC5Q12768 1159 aa30.59■■■□□ 2.49
PABPN1-201ENST00000216727 KBTBD12Q3ZCT8 623 aa30.59■■■□□ 2.49
PABPN1-201ENST00000216727 OSBPL2Q9H1P3 480 aa30.59■■■□□ 2.49
PABPN1-201ENST00000216727 MLXIPLQ9NP71 852 aa30.59■■■□□ 2.49
PABPN1-201ENST00000216727 TTLL3Q9Y4R7 772 aa30.59■■■□□ 2.49
PABPN1-201ENST00000216727 A0A1W2PPM1 405 aa30.58■■■□□ 2.49
PABPN1-201ENST00000216727 SYN3O14994 580 aa30.58■■■□□ 2.49
PABPN1-201ENST00000216727 TYROBPO43914 113 aa30.58■■■□□ 2.49
PABPN1-201ENST00000216727 BFSP2Q13515 415 aa30.58■■■□□ 2.49
PABPN1-201ENST00000216727 PARP6Q2NL67 630 aa30.58■■■□□ 2.49
PABPN1-201ENST00000216727 SLC39A12Q504Y0 691 aa30.58■■■□□ 2.49
PABPN1-201ENST00000216727 FUBP3Q96I24 572 aaKnown RBP eCLIP30.58■■■□□ 2.492e-6■□□□□ 9.2
PABPN1-201ENST00000216727 CABS1Q96KC9 395 aa30.58■■■□□ 2.49
PABPN1-201ENST00000216727 DNAJB4Q9UDY4 337 aa30.58■■■□□ 2.49
PABPN1-201ENST00000216727 ASMTLO95671 621 aa30.57■■■□□ 2.49
PABPN1-201ENST00000216727 IL9RQ01113 521 aa30.57■■■□□ 2.49
PABPN1-201ENST00000216727 NFE2Q16621 373 aaPredicted RBP30.57■■■□□ 2.49
PABPN1-201ENST00000216727 CFAP36Q96G28 342 aa30.57■■■□□ 2.49
PABPN1-201ENST00000216727 EBNA1BP2Q99848 306 aaKnown RBP30.57■■■□□ 2.49
PABPN1-201ENST00000216727 PLAC1Q9HBJ0 212 aa30.57■■■□□ 2.49
PABPN1-201ENST00000216727 IGSF9Q9P2J2 1179 aa30.57■■■□□ 2.49
PABPN1-201ENST00000216727 NBNO60934 754 aa30.57■■■□□ 2.48
PABPN1-201ENST00000216727 SPAG7O75391 227 aa30.57■■■□□ 2.48
PABPN1-201ENST00000216727 CPP00450 1065 aa30.57■■■□□ 2.48
PABPN1-201ENST00000216727 PRKCHP24723 683 aa30.57■■■□□ 2.48
PABPN1-201ENST00000216727 WDR4P57081 412 aaKnown RBP30.57■■■□□ 2.48
PABPN1-201ENST00000216727 FAM126BQ8IXS8 530 aa30.57■■■□□ 2.48
PABPN1-201ENST00000216727 C4orf33Q8N1A6 199 aa30.57■■■□□ 2.48
PABPN1-201ENST00000216727 GDAP1Q8TB36 358 aa30.57■■■□□ 2.48
PABPN1-201ENST00000216727 ARHGEF38Q9NXL2 777 aa30.57■■■□□ 2.48
PABPN1-201ENST00000216727 PRG3Q9Y2Y8 225 aaPredicted RBP30.57■■■□□ 2.48
PABPN1-201ENST00000216727 IKBKGQ9Y6K9 419 aa30.57■■■□□ 2.48
PABPN1-201ENST00000216727 TCP11X1B4DZS4 312 aa30.56■■■□□ 2.48
PABPN1-201ENST00000216727 MYO1CO00159 1063 aa30.56■■■□□ 2.48
PABPN1-201ENST00000216727 ENPP3O14638 875 aa30.56■■■□□ 2.48
PABPN1-201ENST00000216727 IRAK2O43187 625 aa30.56■■■□□ 2.48
PABPN1-201ENST00000216727 PIAS1O75925 651 aa30.56■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms