RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Cfap97Q6ZPR1 541 aa16.38■□□□□ 0.21
Trim39-203ENSMUST00000113706 Slc39a13Q8BZH0 361 aa16.38■□□□□ 0.21
Trim39-203ENSMUST00000113706 Rem2Q8VEL9 341 aa16.38■□□□□ 0.21
Trim39-203ENSMUST00000113706 Fgfr1op2Q9CRA9 253 aa16.38■□□□□ 0.21
Trim39-203ENSMUST00000113706 Dlgap1Q9D415 992 aa16.38■□□□□ 0.21
Trim39-203ENSMUST00000113706 Syap1Q9D5V6 365 aa16.38■□□□□ 0.21
Trim39-203ENSMUST00000113706 Kif9Q9WV04 790 aa16.38■□□□□ 0.21
Trim39-203ENSMUST00000113706 Ccdc144bE9PVZ3 520 aa16.37■□□□□ 0.21
Trim39-203ENSMUST00000113706 Vmn2r11E9Q4X4 861 aa16.37■□□□□ 0.21
Trim39-203ENSMUST00000113706 Abhd12bG3UZN6 359 aa16.37■□□□□ 0.21
Trim39-203ENSMUST00000113706 AgxtO35423 414 aa16.37■□□□□ 0.21
Trim39-203ENSMUST00000113706 Anxa8O35640 327 aa16.37■□□□□ 0.21
Trim39-203ENSMUST00000113706 Fam167bP17257 162 aa16.37■□□□□ 0.21
Trim39-203ENSMUST00000113706 Pax3P24610 479 aa16.37■□□□□ 0.21
Trim39-203ENSMUST00000113706 Oprl1P35377 367 aa16.37■□□□□ 0.21
Trim39-203ENSMUST00000113706 TceancQ3US16 359 aa16.37■□□□□ 0.21
Trim39-203ENSMUST00000113706 CgasQ8C6L5 507 aa16.37■□□□□ 0.21
Trim39-203ENSMUST00000113706 Gm5591Q8CDK1 855 aa16.37■□□□□ 0.21
Trim39-203ENSMUST00000113706 Adnp2Q8CHC8 1165 aaKnown RBP16.37■□□□□ 0.21
Trim39-203ENSMUST00000113706 Thg1lQ9CY52 298 aa16.37■□□□□ 0.21
Trim39-203ENSMUST00000113706 Ccdc103Q9D9P2 237 aa16.37■□□□□ 0.21
Trim39-203ENSMUST00000113706 Xrn2Q9DBR1 951 aaKnown RBP16.37■□□□□ 0.21
Trim39-203ENSMUST00000113706 Kif26aQ52KG5 1881 aa16.37■□□□□ 0.21
Trim39-203ENSMUST00000113706 Gm13212B1ASQ7 799 aa16.37■□□□□ 0.21
Trim39-203ENSMUST00000113706 4930426L09RikE9Q0N7 123 aa16.37■□□□□ 0.21
Trim39-203ENSMUST00000113706 Art2bO35975 289 aa16.37■□□□□ 0.21
Trim39-203ENSMUST00000113706 Elk3P41971 409 aa16.37■□□□□ 0.21
Trim39-203ENSMUST00000113706 Cdo1P60334 200 aa16.37■□□□□ 0.21
Trim39-203ENSMUST00000113706 Fbxw11Q5SRY7 542 aaKnown RBP16.37■□□□□ 0.21
Trim39-203ENSMUST00000113706 Ces5aQ6AW46 575 aa16.37■□□□□ 0.21
Trim39-203ENSMUST00000113706 4930449I24RikQ9D5E3 319 aa16.37■□□□□ 0.21
Trim39-203ENSMUST00000113706 Fam171a2A2A699 822 aa16.36■□□□□ 0.21
Trim39-203ENSMUST00000113706 E230025N22RikG5E8S3 482 aa16.36■□□□□ 0.21
Trim39-203ENSMUST00000113706 FpgsP48760 587 aa16.36■□□□□ 0.21
Trim39-203ENSMUST00000113706 Apobec1P51908 229 aaKnown RBP16.36■□□□□ 0.21
Trim39-203ENSMUST00000113706 Mef2dQ63943 514 aa16.36■□□□□ 0.21
Trim39-203ENSMUST00000113706 MyorgQ69ZQ1 716 aa16.36■□□□□ 0.21
Trim39-203ENSMUST00000113706 Ubap1Q8BH48 502 aa16.36■□□□□ 0.21
Trim39-203ENSMUST00000113706 Zfp449Q8CB76 518 aa16.36■□□□□ 0.21
Trim39-203ENSMUST00000113706 Fam155aQ8CCS2 467 aa16.36■□□□□ 0.21
Trim39-203ENSMUST00000113706 Angel1Q8VCU0 667 aa16.36■□□□□ 0.21
Trim39-203ENSMUST00000113706 Ppa2Q91VM9 330 aa16.36■□□□□ 0.21
Trim39-203ENSMUST00000113706 Q9D9D9 101 aa16.36■□□□□ 0.21
Trim39-203ENSMUST00000113706 Epm2aQ9WUA5 330 aa16.36■□□□□ 0.21
Trim39-203ENSMUST00000113706 Pex11bQ9Z210 259 aa16.36■□□□□ 0.21
Trim39-203ENSMUST00000113706 Adamts6D3Z1A5 1117 aa16.36■□□□□ 0.21
Trim39-203ENSMUST00000113706 PigrO70570 771 aa16.36■□□□□ 0.21
Trim39-203ENSMUST00000113706 Zfy2P20662 777 aa16.36■□□□□ 0.21
Trim39-203ENSMUST00000113706 Vps45P97390 570 aa16.36■□□□□ 0.21
Trim39-203ENSMUST00000113706 Ppp1r1bQ60829 194 aa16.36■□□□□ 0.21
Trim39-203ENSMUST00000113706 Mapre1Q61166 268 aaKnown RBP16.36■□□□□ 0.21
Trim39-203ENSMUST00000113706 Nuak1Q641K5 658 aa16.36■□□□□ 0.21
Trim39-203ENSMUST00000113706 Dnajc8Q6NZB0 253 aaKnown RBP16.36■□□□□ 0.21
Trim39-203ENSMUST00000113706 Cpsf7Q8BTV2 471 aaKnown RBP16.36■□□□□ 0.21
Trim39-203ENSMUST00000113706 Slc35f5Q8R314 524 aa16.36■□□□□ 0.21
Trim39-203ENSMUST00000113706 Krt20Q9D312 431 aa16.36■□□□□ 0.21
Trim39-203ENSMUST00000113706 Rab13Q9DD03 202 aa16.36■□□□□ 0.21
Trim39-203ENSMUST00000113706 Map3k6Q9WTR2 1291 aa16.36■□□□□ 0.21
Trim39-203ENSMUST00000113706 Veph1A1A535 833 aa16.36■□□□□ 0.21
Trim39-203ENSMUST00000113706 4930402K13RikB1AW18 415 aa16.36■□□□□ 0.21
Trim39-203ENSMUST00000113706 Gm8113E0CXS8 587 aa16.36■□□□□ 0.21
Trim39-203ENSMUST00000113706 Dsg3O35902 993 aa16.36■□□□□ 0.21
Trim39-203ENSMUST00000113706 Fbxw2Q60584 422 aa16.36■□□□□ 0.21
Trim39-203ENSMUST00000113706 Ankzf1Q80UU1 748 aaKnown RBP16.36■□□□□ 0.21
Trim39-203ENSMUST00000113706 Tmem202Q80W35 275 aa16.36■□□□□ 0.21
Trim39-203ENSMUST00000113706 Pak5Q8C015 719 aa16.36■□□□□ 0.21
Trim39-203ENSMUST00000113706 Fbxw7Q8VBV4 629 aa16.36■□□□□ 0.21
Trim39-203ENSMUST00000113706 Npffr2Q924H0 417 aa16.36■□□□□ 0.21
Trim39-203ENSMUST00000113706 MceeQ9D1I5 178 aa16.36■□□□□ 0.21
Trim39-203ENSMUST00000113706 Tssk3Q9D2E1 268 aa16.36■□□□□ 0.21
Trim39-203ENSMUST00000113706 Tmem81Q9D5K1 259 aa16.36■□□□□ 0.21
Trim39-203ENSMUST00000113706 Mtmr7Q9Z2C9 660 aa16.36■□□□□ 0.21
Trim39-203ENSMUST00000113706 Gm28360A0A087WR25 190 aa16.35■□□□□ 0.21
Trim39-203ENSMUST00000113706 Calhm3J3QMI4 347 aa16.35■□□□□ 0.21
Trim39-203ENSMUST00000113706 Psma2P49722 234 aa16.35■□□□□ 0.21
Trim39-203ENSMUST00000113706 Ephb2P54763 986 aa16.35■□□□□ 0.21
Trim39-203ENSMUST00000113706 PhbP67778 272 aaKnown RBP16.35■□□□□ 0.21
Trim39-203ENSMUST00000113706 Sp140Q6NSQ5 534 aa16.35■□□□□ 0.21
Trim39-203ENSMUST00000113706 Cand1Q6ZQ38 1230 aa16.35■□□□□ 0.21
Trim39-203ENSMUST00000113706 Best2Q8BGM5 508 aa16.35■□□□□ 0.21
Trim39-203ENSMUST00000113706 Gpc2Q8BKV1 579 aa16.35■□□□□ 0.21
Trim39-203ENSMUST00000113706 Vwa1Q8R2Z5 415 aa16.35■□□□□ 0.21
Trim39-203ENSMUST00000113706 Mrps2Q924T2 291 aaKnown RBP16.35■□□□□ 0.21
Trim39-203ENSMUST00000113706 NonoQ99K48 473 aaKnown RBP16.35■□□□□ 0.21
Trim39-203ENSMUST00000113706 Ccdc182Q9D9C6 152 aa16.35■□□□□ 0.21
Trim39-203ENSMUST00000113706 Cyp4v2Q9DBW0 525 aa16.35■□□□□ 0.21
Trim39-203ENSMUST00000113706 Ripk3Q9QZL0 486 aa16.35■□□□□ 0.21
Trim39-203ENSMUST00000113706 Noc2lQ9WV70 747 aaKnown RBP16.35■□□□□ 0.21
Trim39-203ENSMUST00000113706 Trim55G3X8Y1 545 aa16.35■□□□□ 0.21
Trim39-203ENSMUST00000113706 Gm3424L7N298 263 aa16.35■□□□□ 0.21
Trim39-203ENSMUST00000113706 Gm8246M0QWX9 263 aa16.35■□□□□ 0.21
Trim39-203ENSMUST00000113706 Dpysl2O08553 572 aaKnown RBP16.35■□□□□ 0.21
Trim39-203ENSMUST00000113706 Il3P01586 166 aa16.35■□□□□ 0.21
Trim39-203ENSMUST00000113706 DsppP97399 934 aa16.35■□□□□ 0.21
Trim39-203ENSMUST00000113706 Gbp8Q2V6D6 525 aa16.35■□□□□ 0.21
Trim39-203ENSMUST00000113706 Ankmy2Q3TPE9 440 aa16.35■□□□□ 0.21
Trim39-203ENSMUST00000113706 Ccdc154Q6RUT8 657 aa16.35■□□□□ 0.21
Trim39-203ENSMUST00000113706 Baiap2l2Q80Y61 522 aa16.35■□□□□ 0.21
Trim39-203ENSMUST00000113706 Eif2b5Q8CHW4 717 aa16.35■□□□□ 0.21
Trim39-203ENSMUST00000113706 Thoc1Q8R3N6 657 aaKnown RBP16.35■□□□□ 0.21
Retrieved 100 of 22,080 RNA–protein pairs in 25.4 ms