RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 Q3C1V9 767 aa14.27□□□□□ -0.12
PHGDH-233ENST00000642021 TEDDM1Q5T9Z0 273 aa14.27□□□□□ -0.12
PHGDH-233ENST00000642021 MBLAC2Q68D91 279 aa14.27□□□□□ -0.12
PHGDH-233ENST00000642021 ZNF772Q68DY9 489 aaPredicted RBP14.27□□□□□ -0.12
PHGDH-233ENST00000642021 DENND5BQ6ZUT9 1274 aa14.27□□□□□ -0.12
PHGDH-233ENST00000642021 APOBEC3FQ8IUX4 373 aaKnown RBP14.27□□□□□ -0.12
PHGDH-233ENST00000642021 PYROXD2Q8N2H3 581 aa14.27□□□□□ -0.12
PHGDH-233ENST00000642021 POU5F2Q8N7G0 328 aa14.27□□□□□ -0.12
PHGDH-233ENST00000642021 PGLYRP2Q96PD5 576 aa14.27□□□□□ -0.12
PHGDH-233ENST00000642021 TBCBQ99426 244 aa14.27□□□□□ -0.12
PHGDH-233ENST00000642021 TXNRD2Q9NNW7 524 aa14.27□□□□□ -0.12
PHGDH-233ENST00000642021 DNAJC16Q9Y2G8 782 aa14.27□□□□□ -0.12
PHGDH-233ENST00000642021 A0A088AWK7 358 aa14.27□□□□□ -0.13
PHGDH-233ENST00000642021 SMIM24O75264 130 aa14.27□□□□□ -0.13
PHGDH-233ENST00000642021 CNMDO75829 334 aa14.27□□□□□ -0.13
PHGDH-233ENST00000642021 SORBS2O94875 1100 aaKnown RBP14.27□□□□□ -0.13
PHGDH-233ENST00000642021 FGF3P11487 239 aaPredicted RBP14.27□□□□□ -0.13
PHGDH-233ENST00000642021 VAV1P15498 845 aa14.27□□□□□ -0.13
PHGDH-233ENST00000642021 TPSB2P20231 275 aa14.27□□□□□ -0.13
PHGDH-233ENST00000642021 RBP5P82980 135 aa14.27□□□□□ -0.13
PHGDH-233ENST00000642021 PDE1CQ14123 709 aaPredicted RBP14.27□□□□□ -0.13
PHGDH-233ENST00000642021 TPSAB1Q15661 275 aa14.27□□□□□ -0.13
PHGDH-233ENST00000642021 N4BP2L1Q5TBK1 243 aaPredicted RBP14.27□□□□□ -0.13
PHGDH-233ENST00000642021 TIFABQ6ZNK6 161 aa14.27□□□□□ -0.13
PHGDH-233ENST00000642021 MAVSQ7Z434 540 aa14.27□□□□□ -0.13
PHGDH-233ENST00000642021 GSTCDQ8NEC7 633 aa14.27□□□□□ -0.13
PHGDH-233ENST00000642021 USP6NLQ92738 828 aa14.27□□□□□ -0.13
PHGDH-233ENST00000642021 SMARCAD1Q9H4L7 1026 aa14.27□□□□□ -0.13
PHGDH-233ENST00000642021 DTLQ9NZJ0 730 aa14.27□□□□□ -0.13
PHGDH-233ENST00000642021 BAG2O95816 211 aa14.26□□□□□ -0.13
PHGDH-233ENST00000642021 PRKCGP05129 697 aa14.26□□□□□ -0.13
PHGDH-233ENST00000642021 GSTA2P09210 222 aa14.26□□□□□ -0.13
PHGDH-233ENST00000642021 RALGPS1Q5JS13 557 aa14.26□□□□□ -0.13
PHGDH-233ENST00000642021 C1orf146Q5VVC0 180 aa14.26□□□□□ -0.13
PHGDH-233ENST00000642021 CDKL3Q8IVW4 592 aaPredicted RBP14.26□□□□□ -0.13
PHGDH-233ENST00000642021 CCDC185Q8N715 623 aa14.26□□□□□ -0.13
PHGDH-233ENST00000642021 APBB2Q92870 758 aa14.26□□□□□ -0.13
PHGDH-233ENST00000642021 KCTD15Q96SI1 283 aaPredicted RBP14.26□□□□□ -0.13
PHGDH-233ENST00000642021 LGMNQ99538 433 aa14.26□□□□□ -0.13
PHGDH-233ENST00000642021 CEP41Q9BYV8 373 aa14.26□□□□□ -0.13
PHGDH-233ENST00000642021 IRAK4Q9NWZ3 460 aa14.26□□□□□ -0.13
PHGDH-233ENST00000642021 KIAA1257Q9ULG3 409 aa14.26□□□□□ -0.13
PHGDH-233ENST00000642021 SNX9Q9Y5X1 595 aa14.26□□□□□ -0.13
PHGDH-233ENST00000642021 LOC285556D6RIA3 1793 aa14.26□□□□□ -0.13
PHGDH-233ENST00000642021 TPP1O14773 563 aa14.26□□□□□ -0.13
PHGDH-233ENST00000642021 TXNP10599 105 aaKnown RBP14.26□□□□□ -0.13
PHGDH-233ENST00000642021 PHKA2P46019 1235 aa14.26□□□□□ -0.13
PHGDH-233ENST00000642021 CACNA2D1P54289 1103 aa14.26□□□□□ -0.13
PHGDH-233ENST00000642021 PDE1BQ01064 536 aa14.26□□□□□ -0.13
PHGDH-233ENST00000642021 SEMA5AQ13591 1074 aa14.26□□□□□ -0.13
PHGDH-233ENST00000642021 DPYSL2Q16555 572 aa14.26□□□□□ -0.13
PHGDH-233ENST00000642021 FAM187BQ17R55 369 aa14.26□□□□□ -0.13
PHGDH-233ENST00000642021 SOWAHAQ2M3V2 549 aa14.26□□□□□ -0.13
PHGDH-233ENST00000642021 TRMT5Q32P41 509 aaKnown RBP14.26□□□□□ -0.13
PHGDH-233ENST00000642021 PPM1JQ5JR12 505 aa14.26□□□□□ -0.13
PHGDH-233ENST00000642021 RABGAP1LQ5R372 815 aa14.26□□□□□ -0.13
PHGDH-233ENST00000642021 DPY19L2Q6NUT2 758 aa14.26□□□□□ -0.13
PHGDH-233ENST00000642021 CASC4Q6P4E1 433 aa14.26□□□□□ -0.13
PHGDH-233ENST00000642021 GADL1Q6ZQY3 521 aa14.26□□□□□ -0.13
PHGDH-233ENST00000642021 CCNJLQ8IV13 435 aa14.26□□□□□ -0.13
PHGDH-233ENST00000642021 PPP1R14CQ8TAE6 165 aa14.26□□□□□ -0.13
PHGDH-233ENST00000642021 PIWIL2Q8TC59 973 aaKnown RBP14.26□□□□□ -0.13
PHGDH-233ENST00000642021 CSPG4P5Q96PW8 444 aa14.26□□□□□ -0.13
PHGDH-233ENST00000642021 NFKBIZQ9BYH8 718 aa14.26□□□□□ -0.13
PHGDH-233ENST00000642021 SHCBP1LQ9BZQ2 653 aa14.26□□□□□ -0.13
PHGDH-233ENST00000642021 PPP1R1BQ9UD71 204 aaPredicted RBP14.26□□□□□ -0.13
PHGDH-233ENST00000642021 SCOCQ9UIL1 159 aa14.26□□□□□ -0.13
PHGDH-233ENST00000642021 E2F8A0AVK6 867 aa14.25□□□□□ -0.13
PHGDH-233ENST00000642021 ADCY6O43306 1168 aa14.25□□□□□ -0.13
PHGDH-233ENST00000642021 UBTFL6P0CB48 400 aaPredicted RBP14.25□□□□□ -0.13
PHGDH-233ENST00000642021 SERPINB9P50453 376 aa14.25□□□□□ -0.13
PHGDH-233ENST00000642021 TNFAIP2Q03169 654 aa14.25□□□□□ -0.13
PHGDH-233ENST00000642021 CDK18Q07002 472 aa14.25□□□□□ -0.13
PHGDH-233ENST00000642021 IZUMO2Q6UXV1 221 aa14.25□□□□□ -0.13
PHGDH-233ENST00000642021 RNF111Q6ZNA4 994 aa14.25□□□□□ -0.13
PHGDH-233ENST00000642021 ARCQ7LC44 396 aa14.25□□□□□ -0.13
PHGDH-233ENST00000642021 RAB3IL1Q8TBN0 382 aa14.25□□□□□ -0.13
PHGDH-233ENST00000642021 ARNTL2Q8WYA1 636 aa14.25□□□□□ -0.13
PHGDH-233ENST00000642021 KIF12Q96FN5 646 aa14.25□□□□□ -0.13
PHGDH-233ENST00000642021 TSC22D3Q99576 134 aa14.25□□□□□ -0.13
PHGDH-233ENST00000642021 C11orf84Q9BUA3 381 aaPredicted RBP14.25□□□□□ -0.13
PHGDH-233ENST00000642021 DPEP3Q9H4B8 488 aa14.25□□□□□ -0.13
PHGDH-233ENST00000642021 PNPOQ9NVS9 261 aa14.25□□□□□ -0.13
PHGDH-233ENST00000642021 ITGA11Q9UKX5 1188 aa14.25□□□□□ -0.13
PHGDH-233ENST00000642021 AKT3Q9Y243 479 aa14.25□□□□□ -0.13
PHGDH-233ENST00000642021 ALDH1A2O94788 518 aa14.25□□□□□ -0.13
PHGDH-233ENST00000642021 FESP07332 822 aa14.25□□□□□ -0.13
PHGDH-233ENST00000642021 F7P08709 466 aaPredicted RBP14.25□□□□□ -0.13
PHGDH-233ENST00000642021 GOT1P17174 413 aa14.25□□□□□ -0.13
PHGDH-233ENST00000642021 AOC1P19801 751 aa14.25□□□□□ -0.13
PHGDH-233ENST00000642021 SLC1A6P48664 564 aa14.25□□□□□ -0.13
PHGDH-233ENST00000642021 SESN2P58004 480 aaPredicted RBP14.25□□□□□ -0.13
PHGDH-233ENST00000642021 DNAL1Q4LDG9 190 aa14.25□□□□□ -0.13
PHGDH-233ENST00000642021 VWA5B1Q5TIE3 1220 aa14.25□□□□□ -0.13
PHGDH-233ENST00000642021 NCBP2-AS2Q69YL0 99 aa14.25□□□□□ -0.13
PHGDH-233ENST00000642021 CES3Q6UWW8 571 aa14.25□□□□□ -0.13
PHGDH-233ENST00000642021 PACS1Q6VY07 963 aa14.25□□□□□ -0.13
PHGDH-233ENST00000642021 RSPH3Q86UC2 560 aa14.25□□□□□ -0.13
PHGDH-233ENST00000642021 C7orf31Q8N865 590 aa14.25□□□□□ -0.13
PHGDH-233ENST00000642021 CLMNQ96JQ2 1002 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms