RNA–Protein interactions for RNA: ENST00000641756.1

PHGDH-226, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,132 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-226ENST00000641756 ITIH4Q14624 930 aa18.46■□□□□ 0.55
PHGDH-226ENST00000641756 TRIM71Q2Q1W2 868 aaKnown RBP18.46■□□□□ 0.55
PHGDH-226ENST00000641756 ANKRD20A2Q5SQ80 823 aa18.46■□□□□ 0.55
PHGDH-226ENST00000641756 ANKRD20A1Q5TYW2 823 aa18.46■□□□□ 0.55
PHGDH-226ENST00000641756 ANKRD20A3Q5VUR7 823 aa18.46■□□□□ 0.55
PHGDH-226ENST00000641756 RFX8Q6ZV50 586 aa18.46■□□□□ 0.55
PHGDH-226ENST00000641756 METTL23Q86XA0 190 aa18.46■□□□□ 0.55
PHGDH-226ENST00000641756 PCSK9Q8NBP7 692 aaKnown RBP18.46■□□□□ 0.55
PHGDH-226ENST00000641756 PPM1EQ8WY54 764 aa18.46■□□□□ 0.55
PHGDH-226ENST00000641756 CCT6BQ92526 530 aa18.46■□□□□ 0.55
PHGDH-226ENST00000641756 FRMD8Q9BZ67 464 aaPredicted RBP18.46■□□□□ 0.55
PHGDH-226ENST00000641756 DDIT4Q9NX09 232 aa18.46■□□□□ 0.55
PHGDH-226ENST00000641756 SEPT10Q9P0V9 454 aa18.46■□□□□ 0.55
PHGDH-226ENST00000641756 TTLL3Q9Y4R7 772 aa18.46■□□□□ 0.55
PHGDH-226ENST00000641756 CAPN7Q9Y6W3 813 aa18.46■□□□□ 0.55
PHGDH-226ENST00000641756 HTTP42858 3142 aa18.45■□□□□ 0.54
PHGDH-226ENST00000641756 CST5P28325 142 aaPredicted RBP18.45■□□□□ 0.54
PHGDH-226ENST00000641756 TUSC3Q13454 348 aa18.45■□□□□ 0.54
PHGDH-226ENST00000641756 INTS6LQ5JSJ4 861 aaKnown RBP18.45■□□□□ 0.54
PHGDH-226ENST00000641756 C4orf22Q6V702 233 aa18.45■□□□□ 0.54
PHGDH-226ENST00000641756 FAM47EQ6ZV65 393 aa18.45■□□□□ 0.54
PHGDH-226ENST00000641756 BHLHA9Q7RTU4 235 aa18.45■□□□□ 0.54
PHGDH-226ENST00000641756 MPP5Q8N3R9 675 aa18.45■□□□□ 0.54
PHGDH-226ENST00000641756 CCNYQ8ND76 341 aa18.45■□□□□ 0.54
PHGDH-226ENST00000641756 MCUQ8NE86 351 aa18.45■□□□□ 0.54
PHGDH-226ENST00000641756 OR10T2Q8NGX3 314 aa18.45■□□□□ 0.54
PHGDH-226ENST00000641756 PGBD4Q96DM1 585 aa18.45■□□□□ 0.54
PHGDH-226ENST00000641756 PLAC1Q9HBJ0 212 aa18.45■□□□□ 0.54
PHGDH-226ENST00000641756 A0A0A0MRY4 1105 aa18.44■□□□□ 0.54
PHGDH-226ENST00000641756 CCT8L1PA6NM43 557 aa18.44■□□□□ 0.54
PHGDH-226ENST00000641756 HACD1B0YJ81 288 aa18.44■□□□□ 0.54
PHGDH-226ENST00000641756 FAM155BO75949 473 aa18.44■□□□□ 0.54
PHGDH-226ENST00000641756 TOMM70O94826 608 aa18.44■□□□□ 0.54
PHGDH-226ENST00000641756 OAS1P00973 400 aaKnown RBP18.44■□□□□ 0.54
PHGDH-226ENST00000641756 SP3Q02447 781 aa18.44■□□□□ 0.54
PHGDH-226ENST00000641756 DPYSQ14117 519 aa18.44■□□□□ 0.54
PHGDH-226ENST00000641756 SPARCL1Q14515 664 aa18.44■□□□□ 0.54
PHGDH-226ENST00000641756 BZW1Q7L1Q6 419 aaKnown RBP18.44■□□□□ 0.54
PHGDH-226ENST00000641756 LRRTM3Q86VH5 581 aa18.44■□□□□ 0.54
PHGDH-226ENST00000641756 SPOCK2Q92563 424 aa18.44■□□□□ 0.54
PHGDH-226ENST00000641756 P2RY11Q96G91 374 aa18.44■□□□□ 0.54
PHGDH-226ENST00000641756 SPATA13Q96N96 652 aa18.44■□□□□ 0.54
PHGDH-226ENST00000641756 ACBD6Q9BR61 282 aa18.44■□□□□ 0.54
PHGDH-226ENST00000641756 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.44■□□□□ 0.54
PHGDH-226ENST00000641756 USP15Q9Y4E8 981 aaPredicted RBP18.44■□□□□ 0.54
PHGDH-226ENST00000641756 SNX10Q9Y5X0 201 aa18.44■□□□□ 0.54
PHGDH-226ENST00000641756 MAD1L1Q9Y6D9 718 aa18.44■□□□□ 0.54
PHGDH-226ENST00000641756 IKBKGQ9Y6K9 419 aa18.44■□□□□ 0.54
PHGDH-226ENST00000641756 CASP8AP2Q9UKL3 1982 aa18.44■□□□□ 0.54
PHGDH-226ENST00000641756 THSD7BQ9C0I4 1608 aa18.44■□□□□ 0.54
PHGDH-226ENST00000641756 C9IYK1 514 aa18.44■□□□□ 0.54
PHGDH-226ENST00000641756 DNM1LO00429 736 aa18.44■□□□□ 0.54
PHGDH-226ENST00000641756 SPAG6O75602 509 aa18.44■□□□□ 0.54
PHGDH-226ENST00000641756 CPP00450 1065 aa18.44■□□□□ 0.54
PHGDH-226ENST00000641756 INHBAP08476 426 aa18.44■□□□□ 0.54
PHGDH-226ENST00000641756 TPSB2P20231 275 aa18.44■□□□□ 0.54
PHGDH-226ENST00000641756 GBP2P32456 591 aaPredicted RBP18.44■□□□□ 0.54
PHGDH-226ENST00000641756 FAAP100Q0VG06 881 aa18.44■□□□□ 0.54
PHGDH-226ENST00000641756 SEMA5AQ13591 1074 aa18.44■□□□□ 0.54
PHGDH-226ENST00000641756 TPSAB1Q15661 275 aa18.44■□□□□ 0.54
PHGDH-226ENST00000641756 CGB2Q6NT52 195 aa18.44■□□□□ 0.54
PHGDH-226ENST00000641756 FAM171BQ6P995 826 aa18.44■□□□□ 0.54
PHGDH-226ENST00000641756 ECHDC2Q86YB7 292 aa18.44■□□□□ 0.54
PHGDH-226ENST00000641756 CTAGE3PQ8IX95 158 aa18.44■□□□□ 0.54
PHGDH-226ENST00000641756 COLGALT1Q8NBJ5 622 aa18.44■□□□□ 0.54
PHGDH-226ENST00000641756 SLC44A1Q8WWI5 657 aa18.44■□□□□ 0.54
PHGDH-226ENST00000641756 RSPH1Q8WYR4 309 aa18.44■□□□□ 0.54
PHGDH-226ENST00000641756 C12orf65Q9H3J6 166 aaKnown RBP18.44■□□□□ 0.54
PHGDH-226ENST00000641756 CSNK1G1Q9HCP0 422 aa18.44■□□□□ 0.54
PHGDH-226ENST00000641756 GGT7Q9UJ14 662 aa18.44■□□□□ 0.54
PHGDH-226ENST00000641756 CXorf49A8MYA2 514 aaPredicted RBP18.43■□□□□ 0.54
PHGDH-226ENST00000641756 RNF103O00237 685 aa18.43■□□□□ 0.54
PHGDH-226ENST00000641756 DCLK1O15075 740 aa18.43■□□□□ 0.54
PHGDH-226ENST00000641756 ACLYP53396 1101 aa18.43■□□□□ 0.54
PHGDH-226ENST00000641756 SLC18A1P54219 525 aa18.43■□□□□ 0.54
PHGDH-226ENST00000641756 PRKD1Q15139 912 aaPredicted RBP18.43■□□□□ 0.54
PHGDH-226ENST00000641756 LVRNQ6Q4G3 990 aa18.43■□□□□ 0.54
PHGDH-226ENST00000641756 PPM1NQ8N819 430 aa18.43■□□□□ 0.54
PHGDH-226ENST00000641756 SIGLEC10Q96LC7 697 aa18.43■□□□□ 0.54
PHGDH-226ENST00000641756 PRDM12Q9H4Q4 367 aa18.43■□□□□ 0.54
PHGDH-226ENST00000641756 PNPLA8Q9NP80 782 aa18.43■□□□□ 0.54
PHGDH-226ENST00000641756 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.43■□□□□ 0.54
PHGDH-226ENST00000641756 IQANK1A0A1B0GTG1 560 aa18.43■□□□□ 0.54
PHGDH-226ENST00000641756 M0QZQ0 153 aa18.43■□□□□ 0.54
PHGDH-226ENST00000641756 FSBPO95073 299 aa18.43■□□□□ 0.54
PHGDH-226ENST00000641756 C1QAP02745 245 aa18.43■□□□□ 0.54
PHGDH-226ENST00000641756 CYP11A1P05108 521 aa18.43■□□□□ 0.54
PHGDH-226ENST00000641756 ERCC2P18074 760 aa18.43■□□□□ 0.54
PHGDH-226ENST00000641756 MAGEA3P43357 314 aa18.43■□□□□ 0.54
PHGDH-226ENST00000641756 ACTN3Q08043 901 aaPredicted RBP18.43■□□□□ 0.54
PHGDH-226ENST00000641756 IFRD2Q12894 506 aaPredicted RBP18.43■□□□□ 0.54
PHGDH-226ENST00000641756 CBLBQ13191 982 aa18.43■□□□□ 0.54
PHGDH-226ENST00000641756 DNAJC3Q13217 504 aa18.43■□□□□ 0.54
PHGDH-226ENST00000641756 PAFAH1B3Q15102 231 aaKnown RBP18.43■□□□□ 0.54
PHGDH-226ENST00000641756 FAM26DQ5JW98 314 aa18.43■□□□□ 0.54
PHGDH-226ENST00000641756 HHATQ5VTY9 493 aa18.43■□□□□ 0.54
PHGDH-226ENST00000641756 OVOS1Q6IE37 1185 aa18.43■□□□□ 0.54
PHGDH-226ENST00000641756 UNC5AQ6ZN44 842 aa18.43■□□□□ 0.54
PHGDH-226ENST00000641756 SPATA21Q7Z572 469 aa18.43■□□□□ 0.54
PHGDH-226ENST00000641756 RNF180Q86T96 592 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms