RNA–Protein interactions for RNA: ENST00000640880.1

SCARB2-224, Transcript of scavenger receptor class B member 2, humanhuman

TSL 4

Gene SCARB2, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-224ENST00000640880 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.43□□□□□ -1.22
SCARB2-224ENST00000640880 IGSF1Q8N6C5 1336 aa7.43□□□□□ -1.22
SCARB2-224ENST00000640880 DISP2A7MBM2 1401 aa7.43□□□□□ -1.22
SCARB2-224ENST00000640880 MEGF6O75095 1541 aa7.42□□□□□ -1.22
SCARB2-224ENST00000640880 KIF28PB7ZC32 967 aa7.42□□□□□ -1.22
SCARB2-224ENST00000640880 STX16-NPEPL1H3BU86 382 aa7.42□□□□□ -1.22
SCARB2-224ENST00000640880 STX16O14662 325 aa7.42□□□□□ -1.22
SCARB2-224ENST00000640880 CDC14BO60729 498 aa7.42□□□□□ -1.22
SCARB2-224ENST00000640880 USO1O60763 962 aaKnown RBP7.42□□□□□ -1.22
SCARB2-224ENST00000640880 RPS6KB1P23443 525 aa7.42□□□□□ -1.22
SCARB2-224ENST00000640880 ATXN1P54253 815 aaKnown RBP7.42□□□□□ -1.22
SCARB2-224ENST00000640880 POU5F1Q01860 360 aaKnown RBP7.42□□□□□ -1.22
SCARB2-224ENST00000640880 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.42□□□□□ -1.22
SCARB2-224ENST00000640880 PLEKHO1Q53GL0 409 aaPredicted RBP7.42□□□□□ -1.22
SCARB2-224ENST00000640880 C1orf141Q5JVX7 400 aa7.42□□□□□ -1.22
SCARB2-224ENST00000640880 ZMYM1Q5SVZ6 1142 aa7.42□□□□□ -1.22
SCARB2-224ENST00000640880 ATF7IPQ6VMQ6 1270 aa7.42□□□□□ -1.22
SCARB2-224ENST00000640880 CHD1LQ86WJ1 897 aa7.42□□□□□ -1.22
SCARB2-224ENST00000640880 OR52N2Q8NGI0 321 aa7.42□□□□□ -1.22
SCARB2-224ENST00000640880 MBD3L2Q8NHZ7 208 aaPredicted RBP7.42□□□□□ -1.22
SCARB2-224ENST00000640880 TMEM171Q8WVE6 324 aa7.42□□□□□ -1.22
SCARB2-224ENST00000640880 HMGB4Q8WW32 186 aa7.42□□□□□ -1.22
SCARB2-224ENST00000640880 ST8SIA2Q92186 375 aa7.42□□□□□ -1.22
SCARB2-224ENST00000640880 ZDHHC12Q96GR4 267 aa7.42□□□□□ -1.22
SCARB2-224ENST00000640880 HIST1H2AAQ96QV6 131 aa7.42□□□□□ -1.22
SCARB2-224ENST00000640880 PNKPQ96T60 521 aa7.42□□□□□ -1.22
SCARB2-224ENST00000640880 GPR20Q99678 358 aa7.42□□□□□ -1.22
SCARB2-224ENST00000640880 TREX2Q9BQ50 279 aaPredicted RBP7.42□□□□□ -1.22
SCARB2-224ENST00000640880 TTPALQ9BTX7 342 aa7.42□□□□□ -1.22
SCARB2-224ENST00000640880 PTDSS2Q9BVG9 487 aa7.42□□□□□ -1.22
SCARB2-224ENST00000640880 REXO4Q9GZR2 422 aaKnown RBP7.42□□□□□ -1.22
SCARB2-224ENST00000640880 ACAD9Q9H845 621 aa7.42□□□□□ -1.22
SCARB2-224ENST00000640880 SMYD2Q9NRG4 433 aa7.42□□□□□ -1.22
SCARB2-224ENST00000640880 ZBTB40Q9NUA8 1239 aa7.42□□□□□ -1.22
SCARB2-224ENST00000640880 NHSQ6T4R5 1651 aa7.41□□□□□ -1.22
SCARB2-224ENST00000640880 MROH6A6NGR9 719 aa7.41□□□□□ -1.22
SCARB2-224ENST00000640880 BTBD11A6QL63 1104 aa7.41□□□□□ -1.22
SCARB2-224ENST00000640880 ETV2O00321 342 aaPredicted RBP7.41□□□□□ -1.22
SCARB2-224ENST00000640880 FFAR3O14843 346 aa7.41□□□□□ -1.22
SCARB2-224ENST00000640880 TMCC2O75069 709 aa7.41□□□□□ -1.22
SCARB2-224ENST00000640880 CER1O95813 267 aa7.41□□□□□ -1.22
SCARB2-224ENST00000640880 TFRCP02786 760 aaKnown RBP7.41□□□□□ -1.22
SCARB2-224ENST00000640880 HMOX1P09601 288 aa7.41□□□□□ -1.22
SCARB2-224ENST00000640880 ITGALP20701 1170 aa7.41□□□□□ -1.22
SCARB2-224ENST00000640880 RAD52P43351 418 aa7.41□□□□□ -1.22
SCARB2-224ENST00000640880 MAGEA10P43363 369 aaPredicted RBP7.41□□□□□ -1.22
SCARB2-224ENST00000640880 PGDP52209 483 aa7.41□□□□□ -1.22
SCARB2-224ENST00000640880 CAP1Q01518 475 aa7.41□□□□□ -1.22
SCARB2-224ENST00000640880 PDCLQ13371 301 aa7.41□□□□□ -1.22
SCARB2-224ENST00000640880 CSHL1Q14406 222 aa7.41□□□□□ -1.22
SCARB2-224ENST00000640880 ALDH1L2Q3SY69 923 aa7.41□□□□□ -1.22
SCARB2-224ENST00000640880 CTXN3Q4LDR2 81 aa7.41□□□□□ -1.22
SCARB2-224ENST00000640880 ARHGAP40Q5TG30 622 aa7.41□□□□□ -1.22
SCARB2-224ENST00000640880 FAM205BPQ63HN1 556 aa7.41□□□□□ -1.22
SCARB2-224ENST00000640880 ZNF761Q86XN6 746 aaPredicted RBP7.41□□□□□ -1.22
SCARB2-224ENST00000640880 ELOA2Q8IYF1 753 aaPredicted RBP7.41□□□□□ -1.22
SCARB2-224ENST00000640880 FAM184AQ8NB25 1140 aa7.41□□□□□ -1.22
SCARB2-224ENST00000640880 SYAP1Q96A49 352 aaPredicted RBP7.41□□□□□ -1.22
SCARB2-224ENST00000640880 RNF125Q96EQ8 232 aa7.41□□□□□ -1.22
SCARB2-224ENST00000640880 RSRC1Q96IZ7 334 aaKnown RBP7.41□□□□□ -1.22
SCARB2-224ENST00000640880 ZBTB45Q96K62 511 aaPredicted RBP7.41□□□□□ -1.22
SCARB2-224ENST00000640880 NUDT22Q9BRQ3 303 aa7.41□□□□□ -1.22
SCARB2-224ENST00000640880 ZCWPW1Q9H0M4 648 aa7.41□□□□□ -1.22
SCARB2-224ENST00000640880 KRT84Q9NSB2 600 aa7.41□□□□□ -1.22
SCARB2-224ENST00000640880 HSFX1Q9UBD0 423 aa7.41□□□□□ -1.22
SCARB2-224ENST00000640880 NDRG4Q9ULP0 352 aaKnown RBP7.41□□□□□ -1.22
SCARB2-224ENST00000640880 GPR34Q9UPC5 381 aa7.41□□□□□ -1.22
SCARB2-224ENST00000640880 USP22Q9UPT9 525 aa7.41□□□□□ -1.22
SCARB2-224ENST00000640880 COL3A1P02461 1466 aaPredicted RBP7.41□□□□□ -1.22
SCARB2-224ENST00000640880 TNS1Q9HBL0 1735 aaKnown RBP7.41□□□□□ -1.22
SCARB2-224ENST00000640880 ITGB4P16144 1822 aa7.41□□□□□ -1.22
SCARB2-224ENST00000640880 TOR1BO14657 336 aa7.4□□□□□ -1.22
SCARB2-224ENST00000640880 SPTLC2O15270 562 aa7.4□□□□□ -1.22
SCARB2-224ENST00000640880 TSPAN3O60637 253 aa7.4□□□□□ -1.22
SCARB2-224ENST00000640880 TPM3P06753 285 aa7.4□□□□□ -1.22
SCARB2-224ENST00000640880 CPA1P15085 419 aa7.4□□□□□ -1.22
SCARB2-224ENST00000640880 JUNBP17275 347 aaPredicted RBP7.4□□□□□ -1.22
SCARB2-224ENST00000640880 CR2P20023 1033 aa7.4□□□□□ -1.22
SCARB2-224ENST00000640880 PRKAR1BP31321 381 aa7.4□□□□□ -1.22
SCARB2-224ENST00000640880 MAN2A2P49641 1150 aa7.4□□□□□ -1.22
SCARB2-224ENST00000640880 MCM2P49736 904 aa7.4□□□□□ -1.22
SCARB2-224ENST00000640880 DRG2P55039 364 aaKnown RBP7.4□□□□□ -1.22
SCARB2-224ENST00000640880 MC2RQ01718 297 aa7.4□□□□□ -1.22
SCARB2-224ENST00000640880 GALNT2Q10471 571 aa7.4□□□□□ -1.22
SCARB2-224ENST00000640880 SF3A3Q12874 501 aaKnown RBP eCLIP7.4□□□□□ -1.22
SCARB2-224ENST00000640880 CCNG2Q16589 344 aa7.4□□□□□ -1.22
SCARB2-224ENST00000640880 MEA1Q16626 185 aa7.4□□□□□ -1.22
SCARB2-224ENST00000640880 CERCAMQ5T4B2 595 aa7.4□□□□□ -1.22
SCARB2-224ENST00000640880 TSHZ3Q63HK5 1081 aa7.4□□□□□ -1.22
SCARB2-224ENST00000640880 MCTP1Q6DN14 999 aa7.4□□□□□ -1.22
SCARB2-224ENST00000640880 DGAT2L7PQ6IED9 249 aa7.4□□□□□ -1.22
SCARB2-224ENST00000640880 RGS7BPQ6MZT1 257 aaPredicted RBP7.4□□□□□ -1.22
SCARB2-224ENST00000640880 CAVIN1Q6NZI2 390 aaKnown RBP7.4□□□□□ -1.22
SCARB2-224ENST00000640880 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.4□□□□□ -1.22
SCARB2-224ENST00000640880 RINLQ6ZS11 566 aa7.4□□□□□ -1.22
SCARB2-224ENST00000640880 SYT12Q8IV01 421 aa7.4□□□□□ -1.22
SCARB2-224ENST00000640880 SLC15A3Q8IY34 581 aa7.4□□□□□ -1.22
SCARB2-224ENST00000640880 MB21D1Q8N884 522 aa7.4□□□□□ -1.22
SCARB2-224ENST00000640880 USP38Q8NB14 1042 aa7.4□□□□□ -1.22
SCARB2-224ENST00000640880 ADAMTS15Q8TE58 950 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms