RNA–Protein interactions for RNA: ENST00000638099.1

GABRB3-225, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 2,752 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-225ENST00000638099 STX2P32856 288 aa8.16□□□□□ -1.1
GABRB3-225ENST00000638099 RDXP35241 583 aaKnown RBP8.16□□□□□ -1.1
GABRB3-225ENST00000638099 GMPRP36959 345 aa8.16□□□□□ -1.1
GABRB3-225ENST00000638099 GRIK1P39086 918 aa8.16□□□□□ -1.1
GABRB3-225ENST00000638099 ATN1P54259 1190 aaPredicted RBP8.16□□□□□ -1.1
GABRB3-225ENST00000638099 SESN2P58004 480 aaPredicted RBP8.16□□□□□ -1.1
GABRB3-225ENST00000638099 BMPR2Q13873 1038 aa8.16□□□□□ -1.1
GABRB3-225ENST00000638099 SLC1A5Q15758 541 aa8.16□□□□□ -1.1
GABRB3-225ENST00000638099 DDR2Q16832 855 aa8.16□□□□□ -1.1
GABRB3-225ENST00000638099 SLC45A4Q5BKX6 768 aa8.16□□□□□ -1.1
GABRB3-225ENST00000638099 ARHGEF18Q6ZSZ5 1173 aa8.16□□□□□ -1.1
GABRB3-225ENST00000638099 MICALCLQ6ZW33 695 aa8.16□□□□□ -1.1
GABRB3-225ENST00000638099 BHLHA9Q7RTU4 235 aa8.16□□□□□ -1.1
GABRB3-225ENST00000638099 MRPL10Q7Z7H8 261 aaKnown RBP8.16□□□□□ -1.1
GABRB3-225ENST00000638099 PCGF5Q86SE9 256 aa8.16□□□□□ -1.1
GABRB3-225ENST00000638099 TRABD2AQ86V40 505 aa8.16□□□□□ -1.1
GABRB3-225ENST00000638099 PPM1NQ8N819 430 aa8.16□□□□□ -1.1
GABRB3-225ENST00000638099 ATP11CQ8NB49 1132 aa8.16□□□□□ -1.1
GABRB3-225ENST00000638099 PCSK9Q8NBP7 692 aaKnown RBP8.16□□□□□ -1.1
GABRB3-225ENST00000638099 SMARCD1Q96GM5 515 aa8.16□□□□□ -1.1
GABRB3-225ENST00000638099 CABS1Q96KC9 395 aa8.16□□□□□ -1.1
GABRB3-225ENST00000638099 STMN4Q9H169 189 aaPredicted RBP8.16□□□□□ -1.1
GABRB3-225ENST00000638099 PLAC1Q9HBJ0 212 aa8.16□□□□□ -1.1
GABRB3-225ENST00000638099 STARD7Q9NQZ5 370 aa8.16□□□□□ -1.1
GABRB3-225ENST00000638099 TTLL3Q9Y4R7 772 aa8.16□□□□□ -1.1
GABRB3-225ENST00000638099 THSD7BQ9C0I4 1608 aa8.15□□□□□ -1.1
GABRB3-225ENST00000638099 TOP3BO95985 862 aaKnown RBP8.15□□□□□ -1.1
GABRB3-225ENST00000638099 ERCC2P18074 760 aa8.15□□□□□ -1.1
GABRB3-225ENST00000638099 CA4P22748 312 aa8.15□□□□□ -1.1
GABRB3-225ENST00000638099 ADRA1BP35368 520 aa8.15□□□□□ -1.1
GABRB3-225ENST00000638099 SATB1Q01826 763 aa8.15□□□□□ -1.1
GABRB3-225ENST00000638099 TUSC3Q13454 348 aa8.15□□□□□ -1.1
GABRB3-225ENST00000638099 TCTN1Q2MV58 587 aa8.15□□□□□ -1.1
GABRB3-225ENST00000638099 INTS6LQ5JSJ4 861 aaKnown RBP8.15□□□□□ -1.1
GABRB3-225ENST00000638099 ANKRD20A2Q5SQ80 823 aa8.15□□□□□ -1.1
GABRB3-225ENST00000638099 ANKRD20A1Q5TYW2 823 aa8.15□□□□□ -1.1
GABRB3-225ENST00000638099 ANKRD20A3Q5VUR7 823 aa8.15□□□□□ -1.1
GABRB3-225ENST00000638099 CASC4Q6P4E1 433 aa8.15□□□□□ -1.1
GABRB3-225ENST00000638099 RFX8Q6ZV50 586 aa8.15□□□□□ -1.1
GABRB3-225ENST00000638099 STRADAQ7RTN6 431 aa8.15□□□□□ -1.1
GABRB3-225ENST00000638099 TAC4Q86UU9 113 aa8.15□□□□□ -1.1
GABRB3-225ENST00000638099 RELL1Q8IUW5 271 aa8.15□□□□□ -1.1
GABRB3-225ENST00000638099 USP33Q8TEY7 942 aa8.15□□□□□ -1.1
GABRB3-225ENST00000638099 HTR3CQ8WXA8 447 aa8.15□□□□□ -1.1
GABRB3-225ENST00000638099 P2RY11Q96G91 374 aa8.15□□□□□ -1.1
GABRB3-225ENST00000638099 TTC25Q96NG3 672 aa8.15□□□□□ -1.1
GABRB3-225ENST00000638099 APOL2Q9BQE5 337 aa8.15□□□□□ -1.1
GABRB3-225ENST00000638099 TKTL2Q9H0I9 626 aa8.15□□□□□ -1.1
GABRB3-225ENST00000638099 SLCO1B3Q9NPD5 702 aa8.15□□□□□ -1.1
GABRB3-225ENST00000638099 SMYD2Q9NRG4 433 aa8.15□□□□□ -1.1
GABRB3-225ENST00000638099 PAK5Q9P286 719 aa8.15□□□□□ -1.1
GABRB3-225ENST00000638099 CDH9Q9ULB4 789 aa8.15□□□□□ -1.1
GABRB3-225ENST00000638099 STAP1Q9ULZ2 295 aa8.15□□□□□ -1.1
GABRB3-225ENST00000638099 E2F8A0AVK6 867 aa8.15□□□□□ -1.11
GABRB3-225ENST00000638099 RNF103O00237 685 aa8.15□□□□□ -1.11
GABRB3-225ENST00000638099 ALDH1A1P00352 501 aa8.15□□□□□ -1.11
GABRB3-225ENST00000638099 PSMB4P28070 264 aa8.15□□□□□ -1.11
GABRB3-225ENST00000638099 MSH2P43246 934 aa8.15□□□□□ -1.11
GABRB3-225ENST00000638099 GEMIN4P57678 1058 aaKnown RBP8.15□□□□□ -1.11
GABRB3-225ENST00000638099 FAAP100Q0VG06 881 aa8.15□□□□□ -1.11
GABRB3-225ENST00000638099 DNAJC3Q13217 504 aa8.15□□□□□ -1.11
GABRB3-225ENST00000638099 PTK7Q13308 1070 aa8.15□□□□□ -1.11
GABRB3-225ENST00000638099 EFHC2Q5JST6 749 aa8.15□□□□□ -1.11
GABRB3-225ENST00000638099 RWDD4Q6NW29 188 aaKnown RBP8.15□□□□□ -1.11
GABRB3-225ENST00000638099 PPP1R21Q6ZMI0 780 aa8.15□□□□□ -1.11
GABRB3-225ENST00000638099 ZNF534Q76KX8 674 aa8.15□□□□□ -1.11
GABRB3-225ENST00000638099 TADA2BQ86TJ2 420 aa8.15□□□□□ -1.11
GABRB3-225ENST00000638099 METTL23Q86XA0 190 aa8.15□□□□□ -1.11
GABRB3-225ENST00000638099 TMEM86AQ8N2M4 240 aa8.15□□□□□ -1.11
GABRB3-225ENST00000638099 COLGALT1Q8NBJ5 622 aa8.15□□□□□ -1.11
GABRB3-225ENST00000638099 TFB1MQ8WVM0 346 aaKnown RBP8.15□□□□□ -1.11
GABRB3-225ENST00000638099 KCTD13Q8WZ19 329 aa8.15□□□□□ -1.11
GABRB3-225ENST00000638099 SCLYQ96I15 445 aa8.15□□□□□ -1.11
GABRB3-225ENST00000638099 SLC2A13Q96QE2 648 aa8.15□□□□□ -1.11
GABRB3-225ENST00000638099 TGS1Q96RS0 853 aaKnown RBP8.15□□□□□ -1.11
GABRB3-225ENST00000638099 KLC2Q9H0B6 622 aa8.15□□□□□ -1.11
GABRB3-225ENST00000638099 FAM124BQ9H5Z6 455 aaPredicted RBP8.15□□□□□ -1.11
GABRB3-225ENST00000638099 ZC3H7BQ9UGR2 993 aaKnown RBP8.15□□□□□ -1.11
GABRB3-225ENST00000638099 LGALS13Q9UHV8 139 aa8.15□□□□□ -1.11
GABRB3-225ENST00000638099 ZMYND8Q9ULU4 1186 aaPredicted RBP8.15□□□□□ -1.11
GABRB3-225ENST00000638099 TEX264Q9Y6I9 313 aa8.15□□□□□ -1.11
GABRB3-225ENST00000638099 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.14□□□□□ -1.11
GABRB3-225ENST00000638099 BCLAF3A2AJT9 711 aaKnown RBP8.14□□□□□ -1.11
GABRB3-225ENST00000638099 WDR27A2RRH5 827 aa8.14□□□□□ -1.11
GABRB3-225ENST00000638099 ZNF623O75123 536 aa8.14□□□□□ -1.11
GABRB3-225ENST00000638099 ABHD2P08910 425 aa8.14□□□□□ -1.11
GABRB3-225ENST00000638099 PCSK1P29120 753 aa8.14□□□□□ -1.11
GABRB3-225ENST00000638099 TPI1P60174 286 aa8.14□□□□□ -1.11
GABRB3-225ENST00000638099 YWHAHQ04917 246 aaPredicted RBP8.14□□□□□ -1.11
GABRB3-225ENST00000638099 GRIK3Q13003 919 aa8.14□□□□□ -1.11
GABRB3-225ENST00000638099 GKAP1Q5VSY0 366 aaPredicted RBP8.14□□□□□ -1.11
GABRB3-225ENST00000638099 LHX8Q68G74 356 aa8.14□□□□□ -1.11
GABRB3-225ENST00000638099 TRAF7Q6Q0C0 670 aa8.14□□□□□ -1.11
GABRB3-225ENST00000638099 ARHGAP36Q6ZRI8 547 aa8.14□□□□□ -1.11
GABRB3-225ENST00000638099 ZNF598Q86UK7 904 aaKnown RBP8.14□□□□□ -1.11
GABRB3-225ENST00000638099 CDKL3Q8IVW4 592 aaPredicted RBP8.14□□□□□ -1.11
GABRB3-225ENST00000638099 CACNA2D3Q8IZS8 1091 aa8.14□□□□□ -1.11
GABRB3-225ENST00000638099 VPS52Q8N1B4 723 aa8.14□□□□□ -1.11
GABRB3-225ENST00000638099 MICALL1Q8N3F8 863 aa8.14□□□□□ -1.11
GABRB3-225ENST00000638099 ATAD1Q8NBU5 361 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms