RNA–Protein interactions for RNA: ENST00000637520.1

ARHGEF9-233, Transcript of Cdc42 guanine nucleotide exchange factor 9, human

TSL 5 BASIC

Gene ARHGEF9, Length 5,682 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGEF9-233	ENST00000637520	KRT6C	P48668	564 aa		10.89	□□□□□ -0.67
ARHGEF9-233	ENST00000637520	TUFM	P49411	452 aa	Known RBP	10.89	□□□□□ -0.67
ARHGEF9-233	ENST00000637520	MAD2L1	Q13257	205 aa	Predicted RBP	10.89	□□□□□ -0.67
ARHGEF9-233	ENST00000637520	SGF29	Q96ES7	293 aa		10.89	□□□□□ -0.67
ARHGEF9-233	ENST00000637520	SERAC1	Q96JX3	654 aa		10.89	□□□□□ -0.67
ARHGEF9-233	ENST00000637520	BBS2	Q9BXC9	721 aa		10.89	□□□□□ -0.67
ARHGEF9-233	ENST00000637520	ASB7	Q9H672	318 aa		10.89	□□□□□ -0.67
ARHGEF9-233	ENST00000637520	TBC1D23	Q9NUY8	699 aa		10.89	□□□□□ -0.67
ARHGEF9-233	ENST00000637520	ALG6	Q9Y672	507 aa		10.89	□□□□□ -0.67
ARHGEF9-233	ENST00000637520	NCF1B	A6NI72	391 aa	Predicted RBP	10.89	□□□□□ -0.67
ARHGEF9-233	ENST00000637520	NCF1C	A8MVU1	366 aa	Predicted RBP	10.89	□□□□□ -0.67
ARHGEF9-233	ENST00000637520	TMEM114	B3SHH9	223 aa		10.89	□□□□□ -0.67
ARHGEF9-233	ENST00000637520	GSTM1	P09488	218 aa		10.89	□□□□□ -0.67
ARHGEF9-233	ENST00000637520	NCF1	P14598	390 aa	Predicted RBP	10.89	□□□□□ -0.67
ARHGEF9-233	ENST00000637520	CCR1	P32246	355 aa		10.89	□□□□□ -0.67
ARHGEF9-233	ENST00000637520	SOX6	P35712	828 aa		10.89	□□□□□ -0.67
ARHGEF9-233	ENST00000637520	COIL	P38432	576 aa	Predicted RBP	10.89	□□□□□ -0.67
ARHGEF9-233	ENST00000637520	CTCF	P49711	727 aa	Predicted RBP	10.89	□□□□□ -0.67
ARHGEF9-233	ENST00000637520	PURA	Q00577	322 aa	Known RBP	10.89	□□□□□ -0.67
ARHGEF9-233	ENST00000637520	THTPA	Q9BU02	230 aa		10.89	□□□□□ -0.67
ARHGEF9-233	ENST00000637520	TRIM49D1	C9J1S8	452 aa		10.89	□□□□□ -0.67
ARHGEF9-233	ENST00000637520	SLCO1B7	G3V0H7	640 aa		10.89	□□□□□ -0.67
ARHGEF9-233	ENST00000637520	LSM8	O95777	96 aa	Known RBP	10.89	□□□□□ -0.67
ARHGEF9-233	ENST00000637520	OR56A5	P0C7T3	313 aa		10.89	□□□□□ -0.67
ARHGEF9-233	ENST00000637520	CTSE	P14091	401 aa		10.89	□□□□□ -0.67
ARHGEF9-233	ENST00000637520	TCN1	P20061	433 aa	Predicted RBP	10.89	□□□□□ -0.67
ARHGEF9-233	ENST00000637520	SOX11	P35716	441 aa		10.89	□□□□□ -0.67
ARHGEF9-233	ENST00000637520	DMTN	Q08495	405 aa		10.89	□□□□□ -0.67
ARHGEF9-233	ENST00000637520	SLC22A9	Q8IVM8	553 aa		10.89	□□□□□ -0.67
ARHGEF9-233	ENST00000637520	SLAIN1	Q8ND83	568 aa		10.89	□□□□□ -0.67
ARHGEF9-233	ENST00000637520	ST13P5	Q8NFI4	369 aa	Predicted RBP	10.89	□□□□□ -0.67
ARHGEF9-233	ENST00000637520	FAM172A	Q8WUF8	416 aa		10.89	□□□□□ -0.67
ARHGEF9-233	ENST00000637520	USP7	Q93009	1102 aa		10.89	□□□□□ -0.67
ARHGEF9-233	ENST00000637520	CPB2	Q96IY4	423 aa		10.89	□□□□□ -0.67
ARHGEF9-233	ENST00000637520	MTMR12	Q9C0I1	747 aa		10.89	□□□□□ -0.67
ARHGEF9-233	ENST00000637520	IGFLR1	Q9H665	355 aa		10.89	□□□□□ -0.67
ARHGEF9-233	ENST00000637520	CYP7B1	O75881	506 aa		10.88	□□□□□ -0.67
ARHGEF9-233	ENST00000637520	DGKI	O75912	1065 aa		10.88	□□□□□ -0.67
ARHGEF9-233	ENST00000637520	ENDOD1	O94919	500 aa		10.88	□□□□□ -0.67
ARHGEF9-233	ENST00000637520	STAU1	O95793	577 aa	Known RBP	10.88	□□□□□ -0.67
ARHGEF9-233	ENST00000637520	ATP5B	P06576	529 aa	Known RBP	10.88	□□□□□ -0.67
ARHGEF9-233	ENST00000637520	ST13	P50502	369 aa	Known RBP	10.88	□□□□□ -0.67
ARHGEF9-233	ENST00000637520	TBX4	P57082	545 aa		10.88	□□□□□ -0.67
ARHGEF9-233	ENST00000637520	PLPPR4	Q7Z2D5	763 aa		10.88	□□□□□ -0.67
ARHGEF9-233	ENST00000637520	CBWD2	Q8IUF1	395 aa		10.88	□□□□□ -0.67
ARHGEF9-233	ENST00000637520	RGL4	Q8IZJ4	473 aa		10.88	□□□□□ -0.67
ARHGEF9-233	ENST00000637520	YIPF3	Q9GZM5	350 aa		10.88	□□□□□ -0.67
ARHGEF9-233	ENST00000637520	NEK6	Q9HC98	313 aa		10.88	□□□□□ -0.67
ARHGEF9-233	ENST00000637520	NT5M	Q9NPB1	228 aa		10.88	□□□□□ -0.67
ARHGEF9-233	ENST00000637520	CNTNAP2	Q9UHC6	1331 aa		10.88	□□□□□ -0.67
ARHGEF9-233	ENST00000637520	TM9SF1	O15321	606 aa		10.88	□□□□□ -0.67
ARHGEF9-233	ENST00000637520	HS6ST1	O60243	411 aa		10.88	□□□□□ -0.67
ARHGEF9-233	ENST00000637520	GUCY1B2	O75343	617 aa		10.88	□□□□□ -0.67
ARHGEF9-233	ENST00000637520	PGK1	P00558	417 aa		10.88	□□□□□ -0.67
ARHGEF9-233	ENST00000637520	ENO2	P09104	434 aa	Predicted RBP	10.88	□□□□□ -0.67
ARHGEF9-233	ENST00000637520	RXRG	P48443	463 aa		10.88	□□□□□ -0.67
ARHGEF9-233	ENST00000637520	CCNG1	P51959	295 aa		10.88	□□□□□ -0.67
ARHGEF9-233	ENST00000637520	ACOX1	Q15067	660 aa		10.88	□□□□□ -0.67
ARHGEF9-233	ENST00000637520	CCDC149	Q6ZUS6	474 aa		10.88	□□□□□ -0.67
ARHGEF9-233	ENST00000637520	SPACA7	Q96KW9	195 aa		10.88	□□□□□ -0.67
ARHGEF9-233	ENST00000637520	SYT15	Q9BQS2	421 aa		10.88	□□□□□ -0.67
ARHGEF9-233	ENST00000637520	EPN3	Q9H201	632 aa		10.88	□□□□□ -0.67
ARHGEF9-233	ENST00000637520	DIABLO	Q9NR28	239 aa		10.88	□□□□□ -0.67
ARHGEF9-233	ENST00000637520	IARS2	Q9NSE4	1012 aa	Known RBP	10.88	□□□□□ -0.67
ARHGEF9-233	ENST00000637520	SAE1	Q9UBE0	346 aa	Predicted RBP	10.88	□□□□□ -0.67
ARHGEF9-233	ENST00000637520	FAM220BP	B1ANY3	271 aa		10.88	□□□□□ -0.67
ARHGEF9-233	ENST00000637520		B2RBV5	119 aa		10.88	□□□□□ -0.67
ARHGEF9-233	ENST00000637520	SERPINF2	P08697	491 aa		10.88	□□□□□ -0.67
ARHGEF9-233	ENST00000637520	POLR2L	P62875	67 aa	Known RBP	10.88	□□□□□ -0.67
ARHGEF9-233	ENST00000637520	MMRN1	Q13201	1228 aa		10.88	□□□□□ -0.67
ARHGEF9-233	ENST00000637520	FBXO47	Q5MNV8	452 aa		10.88	□□□□□ -0.67
ARHGEF9-233	ENST00000637520	LPCAT1	Q8NF37	534 aa		10.88	□□□□□ -0.67
ARHGEF9-233	ENST00000637520	SUSD6	Q92537	303 aa		10.88	□□□□□ -0.67
ARHGEF9-233	ENST00000637520	TMEM237	Q96Q45	408 aa		10.88	□□□□□ -0.67
ARHGEF9-233	ENST00000637520	ACTR8	Q9H981	624 aa		10.88	□□□□□ -0.67
ARHGEF9-233	ENST00000637520	POLG2	Q9UHN1	485 aa		10.88	□□□□□ -0.67
ARHGEF9-233	ENST00000637520	ATP6V1H	Q9UI12	483 aa		10.88	□□□□□ -0.67
ARHGEF9-233	ENST00000637520	AP4E1	Q9UPM8	1137 aa		10.88	□□□□□ -0.67
ARHGEF9-233	ENST00000637520	MAGEB16	A2A368	324 aa		10.88	□□□□□ -0.67
ARHGEF9-233	ENST00000637520	THRA	P10827	490 aa		10.88	□□□□□ -0.67
ARHGEF9-233	ENST00000637520	TKTL1	P51854	596 aa		10.88	□□□□□ -0.67
ARHGEF9-233	ENST00000637520	COPA	P53621	1224 aa		10.88	□□□□□ -0.67
ARHGEF9-233	ENST00000637520	TRIP10	Q15642	601 aa		10.88	□□□□□ -0.67
ARHGEF9-233	ENST00000637520	FUT11	Q495W5	492 aa		10.88	□□□□□ -0.67
ARHGEF9-233	ENST00000637520	ATP6AP1L	Q52LC2	224 aa		10.88	□□□□□ -0.67
ARHGEF9-233	ENST00000637520	NOL9	Q5SY16	702 aa	Known RBP	10.88	□□□□□ -0.67
ARHGEF9-233	ENST00000637520	MAGEC3	Q8TD91	643 aa		10.88	□□□□□ -0.67
ARHGEF9-233	ENST00000637520	DTNBP1	Q96EV8	351 aa		10.88	□□□□□ -0.67
ARHGEF9-233	ENST00000637520	NSL1	Q96IY1	281 aa		10.88	□□□□□ -0.67
ARHGEF9-233	ENST00000637520	PDGFD	Q9GZP0	370 aa	Predicted RBP	10.88	□□□□□ -0.67
ARHGEF9-233	ENST00000637520	PARVB	Q9HBI1	364 aa		10.88	□□□□□ -0.67
ARHGEF9-233	ENST00000637520		V9GYQ6	96 aa		10.88	□□□□□ -0.67
ARHGEF9-233	ENST00000637520	PHF20L1	A8MW92	1017 aa		10.87	□□□□□ -0.67
ARHGEF9-233	ENST00000637520	MEIS2	O14770	477 aa		10.87	□□□□□ -0.67
ARHGEF9-233	ENST00000637520	ZNF7	P17097	686 aa	Predicted RBP	10.87	□□□□□ -0.67
ARHGEF9-233	ENST00000637520	POLR2E	P19388	210 aa	Known RBP	10.87	□□□□□ -0.67
ARHGEF9-233	ENST00000637520	RANBP1	P43487	201 aa		10.87	□□□□□ -0.67
ARHGEF9-233	ENST00000637520	THOP1	P52888	689 aa		10.87	□□□□□ -0.67
ARHGEF9-233	ENST00000637520	CYP24A1	Q07973	514 aa		10.87	□□□□□ -0.67
ARHGEF9-233	ENST00000637520	CCDC81	Q6ZN84	652 aa		10.87	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms