RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 GPR152Q8TDT2 470 aa15.91■□□□□ 0.14
CLN6-219ENST00000637329 GIPC2Q8TF65 315 aa15.91■□□□□ 0.14
CLN6-219ENST00000637329 HDAC7Q8WUI4 952 aa15.91■□□□□ 0.14
CLN6-219ENST00000637329 CASP10Q92851 521 aa15.91■□□□□ 0.14
CLN6-219ENST00000637329 PSMG2Q969U7 264 aa15.91■□□□□ 0.14
CLN6-219ENST00000637329 HAPLN3Q96S86 360 aa15.91■□□□□ 0.14
CLN6-219ENST00000637329 EPAS1Q99814 870 aa15.91■□□□□ 0.14
CLN6-219ENST00000637329 OSBPL2Q9H1P3 480 aa15.91■□□□□ 0.14
CLN6-219ENST00000637329 FAM114A2Q9NRY5 505 aa15.91■□□□□ 0.14
CLN6-219ENST00000637329 DRG1Q9Y295 367 aaKnown RBP15.91■□□□□ 0.14
CLN6-219ENST00000637329 CLUHO75153 1309 aa15.91■□□□□ 0.14
CLN6-219ENST00000637329 TTC28Q96AY4 2481 aa15.9■□□□□ 0.14
CLN6-219ENST00000637329 ZNF638Q14966 1978 aaKnown RBP15.9■□□□□ 0.14
CLN6-219ENST00000637329 LPXNO60711 386 aa15.9■□□□□ 0.14
CLN6-219ENST00000637329 CXCL14O95715 111 aa15.9■□□□□ 0.14
CLN6-219ENST00000637329 ITGAVP06756 1048 aa15.9■□□□□ 0.14
CLN6-219ENST00000637329 HMGA1P17096 107 aaKnown RBP15.9■□□□□ 0.14
CLN6-219ENST00000637329 NR2C2P49116 596 aa15.9■□□□□ 0.14
CLN6-219ENST00000637329 DRG2P55039 364 aaKnown RBP15.9■□□□□ 0.14
CLN6-219ENST00000637329 DYNLT1P63172 113 aa15.9■□□□□ 0.14
CLN6-219ENST00000637329 SMAD3P84022 425 aaKnown RBP15.9■□□□□ 0.14
CLN6-219ENST00000637329 SLC7A5Q01650 507 aa15.9■□□□□ 0.14
CLN6-219ENST00000637329 OTUD4Q01804 1114 aaKnown RBP15.9■□□□□ 0.14
CLN6-219ENST00000637329 NRG1Q02297 640 aaPredicted RBP15.9■□□□□ 0.14
CLN6-219ENST00000637329 GUCY2DQ02846 1103 aa15.9■□□□□ 0.14
CLN6-219ENST00000637329 RING1Q06587 406 aa15.9■□□□□ 0.14
CLN6-219ENST00000637329 MMRN1Q13201 1228 aa15.9■□□□□ 0.14
CLN6-219ENST00000637329 PTK6Q13882 451 aa15.9■□□□□ 0.14
CLN6-219ENST00000637329 LLGL1Q15334 1064 aa15.9■□□□□ 0.14
CLN6-219ENST00000637329 OASLQ15646 514 aaKnown RBP15.9■□□□□ 0.14
CLN6-219ENST00000637329 TRIP4Q15650 581 aaPredicted RBP15.9■□□□□ 0.14
CLN6-219ENST00000637329 C9orf50Q5SZB4 431 aa15.9■□□□□ 0.14
CLN6-219ENST00000637329 PQLC3Q8N755 202 aa15.9■□□□□ 0.14
CLN6-219ENST00000637329 PLD5Q8N7P1 536 aa15.9■□□□□ 0.14
CLN6-219ENST00000637329 PCDH19Q8TAB3 1148 aa15.9■□□□□ 0.14
CLN6-219ENST00000637329 ACTL9Q8TC94 416 aa15.9■□□□□ 0.14
CLN6-219ENST00000637329 SPPL3Q8TCT6 385 aa15.9■□□□□ 0.14
CLN6-219ENST00000637329 POF1BQ8WVV4 589 aa15.9■□□□□ 0.14
CLN6-219ENST00000637329 P3H4Q92791 437 aa15.9■□□□□ 0.14
CLN6-219ENST00000637329 RNF34Q969K3 372 aa15.9■□□□□ 0.14
CLN6-219ENST00000637329 KLHL5Q96PQ7 755 aa15.9■□□□□ 0.14
CLN6-219ENST00000637329 TGS1Q96RS0 853 aaKnown RBP15.9■□□□□ 0.14
CLN6-219ENST00000637329 ERP44Q9BS26 406 aa15.9■□□□□ 0.14
CLN6-219ENST00000637329 TKTL2Q9H0I9 626 aa15.9■□□□□ 0.14
CLN6-219ENST00000637329 EPB41L5Q9HCM4 733 aa15.9■□□□□ 0.14
CLN6-219ENST00000637329 RAPGEFL1Q9UHV5 662 aa15.9■□□□□ 0.14
CLN6-219ENST00000637329 C2orf71A6NGG8 1288 aa15.89■□□□□ 0.13
CLN6-219ENST00000637329 EEF2KO00418 725 aaKnown RBP15.89■□□□□ 0.13
CLN6-219ENST00000637329 NDC80O14777 642 aa15.89■□□□□ 0.13
CLN6-219ENST00000637329 TGM5O43548 720 aa15.89■□□□□ 0.13
CLN6-219ENST00000637329 TLR5O60602 858 aa15.89■□□□□ 0.13
CLN6-219ENST00000637329 GLUD1P00367 558 aa15.89■□□□□ 0.13
CLN6-219ENST00000637329 HOXD11P31277 338 aaPredicted RBP15.89■□□□□ 0.13
CLN6-219ENST00000637329 CA8P35219 290 aa15.89■□□□□ 0.13
CLN6-219ENST00000637329 PGFP49763 221 aa15.89■□□□□ 0.13
CLN6-219ENST00000637329 TWF1Q12792 350 aa15.89■□□□□ 0.13
CLN6-219ENST00000637329 DPYSQ14117 519 aa15.89■□□□□ 0.13
CLN6-219ENST00000637329 PPP1R7Q15435 360 aa15.89■□□□□ 0.13
CLN6-219ENST00000637329 TAF12Q16514 161 aa15.89■□□□□ 0.13
CLN6-219ENST00000637329 DUPD1Q68J44 220 aa15.89■□□□□ 0.13
CLN6-219ENST00000637329 LILRA6Q6PI73 481 aa15.89■□□□□ 0.13
CLN6-219ENST00000637329 RFX8Q6ZV50 586 aa15.89■□□□□ 0.13
CLN6-219ENST00000637329 BZW1Q7L1Q6 419 aaKnown RBP15.89■□□□□ 0.13
CLN6-219ENST00000637329 MRPL43Q8N983 215 aaKnown RBP15.89■□□□□ 0.13
CLN6-219ENST00000637329 SLC39A13Q96H72 371 aa15.89■□□□□ 0.13
CLN6-219ENST00000637329 CCDC114Q96M63 670 aa15.89■□□□□ 0.13
CLN6-219ENST00000637329 C17orf80Q9BSJ5 609 aa15.89■□□□□ 0.13
CLN6-219ENST00000637329 ARFGAP3Q9NP61 516 aa15.89■□□□□ 0.13
CLN6-219ENST00000637329 ARHGEF4Q9NR80 690 aa15.89■□□□□ 0.13
CLN6-219ENST00000637329 TRPM5Q9NZQ8 1165 aa15.89■□□□□ 0.13
CLN6-219ENST00000637329 CWC15Q9P013 229 aaKnown RBP15.89■□□□□ 0.13
CLN6-219ENST00000637329 DNPEPQ9ULA0 475 aa15.89■□□□□ 0.13
CLN6-219ENST00000637329 MAGED2Q9UNF1 606 aaPredicted RBP15.89■□□□□ 0.13
CLN6-219ENST00000637329 HBS1LQ9Y450 684 aaKnown RBP15.89■□□□□ 0.13
CLN6-219ENST00000637329 RAD54BQ9Y620 910 aa15.89■□□□□ 0.13
CLN6-219ENST00000637329 CFAP69A5D8W1 941 aa15.88■□□□□ 0.13
CLN6-219ENST00000637329 MSI1O43347 362 aaKnown RBP15.88■□□□□ 0.13
CLN6-219ENST00000637329 IGLV3-27P01718 113 aa15.88■□□□□ 0.13
CLN6-219ENST00000637329 APOEP02649 317 aa15.88■□□□□ 0.13
CLN6-219ENST00000637329 CA3P07451 260 aa15.88■□□□□ 0.13
CLN6-219ENST00000637329 GOT1P17174 413 aa15.88■□□□□ 0.13
CLN6-219ENST00000637329 HOXC13P31276 330 aa15.88■□□□□ 0.13
CLN6-219ENST00000637329 CLCN6P51797 869 aa15.88■□□□□ 0.13
CLN6-219ENST00000637329 TBX4P57082 545 aa15.88■□□□□ 0.13
CLN6-219ENST00000637329 TPI1P60174 286 aa15.88■□□□□ 0.13
CLN6-219ENST00000637329 ERVK-21P61565 698 aa15.88■□□□□ 0.13
CLN6-219ENST00000637329 XRCC4Q13426 336 aa15.88■□□□□ 0.13
CLN6-219ENST00000637329 SNX1Q13596 522 aa15.88■□□□□ 0.13
CLN6-219ENST00000637329 SHHQ15465 462 aa15.88■□□□□ 0.13
CLN6-219ENST00000637329 C10orf120Q5SQS8 335 aa15.88■□□□□ 0.13
CLN6-219ENST00000637329 PLPP4Q5VZY2 271 aa15.88■□□□□ 0.13
CLN6-219ENST00000637329 TMCO3Q6UWJ1 677 aa15.88■□□□□ 0.13
CLN6-219ENST00000637329 CCNI2Q6ZMN8 369 aaPredicted RBP15.88■□□□□ 0.13
CLN6-219ENST00000637329 PYROXD2Q8N2H3 581 aa15.88■□□□□ 0.13
CLN6-219ENST00000637329 ALLCQ8N6M5 410 aa15.88■□□□□ 0.13
CLN6-219ENST00000637329 CCDC89Q8N998 374 aa15.88■□□□□ 0.13
CLN6-219ENST00000637329 HAUS1Q96CS2 278 aa15.88■□□□□ 0.13
CLN6-219ENST00000637329 ZNF512Q96ME7 567 aaPredicted RBP15.88■□□□□ 0.13
CLN6-219ENST00000637329 TRIM51Q9BSJ1 452 aa15.88■□□□□ 0.13
CLN6-219ENST00000637329 ALG13Q9NP73 1137 aaKnown RBP15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms