RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 LMO3Q8TAP4 145 aa18.69■□□□□ 0.58
PNKP-225ENST00000636214 CEP76Q8TAP6 659 aa18.69■□□□□ 0.58
PNKP-225ENST00000636214 FAM149B1Q96BN6 582 aa18.69■□□□□ 0.58
PNKP-225ENST00000636214 TMA16Q96EY4 203 aaKnown RBP18.69■□□□□ 0.58
PNKP-225ENST00000636214 TRIM62Q9BVG3 475 aa18.69■□□□□ 0.58
PNKP-225ENST00000636214 MIS12Q9H081 205 aa18.69■□□□□ 0.58
PNKP-225ENST00000636214 ELOVL2Q9NXB9 296 aa18.69■□□□□ 0.58
PNKP-225ENST00000636214 KIAA1468Q9P260 1216 aa18.69■□□□□ 0.58
PNKP-225ENST00000636214 THAP10Q9P2Z0 257 aaPredicted RBP18.69■□□□□ 0.58
PNKP-225ENST00000636214 RWDD2AQ9UIY3 292 aa18.69■□□□□ 0.58
PNKP-225ENST00000636214 ATXN2Q99700 1313 aaKnown RBP18.69■□□□□ 0.58
PNKP-225ENST00000636214 IGHV1OR15-9A0A0B4J2B8 117 aa18.68■□□□□ 0.58
PNKP-225ENST00000636214 WASH3PC4AMC7 463 aa18.68■□□□□ 0.58
PNKP-225ENST00000636214 RNF225M0QZC1 329 aaPredicted RBP18.68■□□□□ 0.58
PNKP-225ENST00000636214 TIMM44O43615 452 aa18.68■□□□□ 0.58
PNKP-225ENST00000636214 ITPKAP23677 461 aa18.68■□□□□ 0.58
PNKP-225ENST00000636214 ACADSBP45954 432 aa18.68■□□□□ 0.58
PNKP-225ENST00000636214 ZNF33AQ06730 810 aa18.68■□□□□ 0.58
PNKP-225ENST00000636214 DUOXA1Q1HG43 343 aa18.68■□□□□ 0.58
PNKP-225ENST00000636214 UAP1L1Q3KQV9 507 aa18.68■□□□□ 0.58
PNKP-225ENST00000636214 MSANTD2Q6P1R3 559 aa18.68■□□□□ 0.58
PNKP-225ENST00000636214 SERPINA13PQ6UXR4 307 aa18.68■□□□□ 0.58
PNKP-225ENST00000636214 ENOSF1Q7L5Y1 443 aa18.68■□□□□ 0.58
PNKP-225ENST00000636214 CCDC117Q8IWD4 279 aaPredicted RBP18.68■□□□□ 0.58
PNKP-225ENST00000636214 DEFB119Q8N690 84 aa18.68■□□□□ 0.58
PNKP-225ENST00000636214 WFIKKN2Q8TEU8 576 aa18.68■□□□□ 0.58
PNKP-225ENST00000636214 PIWIL1Q96J94 861 aaKnown RBP18.68■□□□□ 0.58
PNKP-225ENST00000636214 SERPINB11Q96P15 392 aa18.68■□□□□ 0.58
PNKP-225ENST00000636214 DDX50Q9BQ39 737 aaKnown RBP18.68■□□□□ 0.58
PNKP-225ENST00000636214 UBE2TQ9NPD8 197 aaPredicted RBP18.68■□□□□ 0.58
PNKP-225ENST00000636214 CHMP5Q9NZZ3 219 aa18.68■□□□□ 0.58
PNKP-225ENST00000636214 EPHX1P07099 455 aa18.67■□□□□ 0.58
PNKP-225ENST00000636214 ACADMP11310 421 aa18.67■□□□□ 0.58
PNKP-225ENST00000636214 NCAM1P13591 858 aa18.67■□□□□ 0.58
PNKP-225ENST00000636214 IL12RB1P42701 662 aa18.67■□□□□ 0.58
PNKP-225ENST00000636214 NOVA1P51513 510 aaKnown RBP18.67■□□□□ 0.58
PNKP-225ENST00000636214 TBX4P57082 545 aa18.67■□□□□ 0.58
PNKP-225ENST00000636214 IRX4P78413 519 aa18.67■□□□□ 0.58
PNKP-225ENST00000636214 ZNF234Q14588 700 aa18.67■□□□□ 0.58
PNKP-225ENST00000636214 FNDC3BQ53EP0 1204 aaKnown RBP18.67■□□□□ 0.58
PNKP-225ENST00000636214 SYCP2LQ5T4T6 812 aa18.67■□□□□ 0.58
PNKP-225ENST00000636214 RGL4Q8IZJ4 473 aa18.67■□□□□ 0.58
PNKP-225ENST00000636214 ZNF557Q8N988 423 aaPredicted RBP18.67■□□□□ 0.58
PNKP-225ENST00000636214 FOXJ1Q92949 421 aa18.67■□□□□ 0.58
PNKP-225ENST00000636214 MRGPRX1Q96LB2 322 aa18.67■□□□□ 0.58
PNKP-225ENST00000636214 PRDM16Q9HAZ2 1276 aa18.67■□□□□ 0.58
PNKP-225ENST00000636214 PLA2G4CQ9UP65 541 aa18.67■□□□□ 0.58
PNKP-225ENST00000636214 ASCC3Q8N3C0 2202 aaKnown RBP18.66■□□□□ 0.58
PNKP-225ENST00000636214 TNRC6BQ9UPQ9 1833 aaKnown RBP18.66■□□□□ 0.58
PNKP-225ENST00000636214 CAPN9O14815 690 aa18.66■□□□□ 0.58
PNKP-225ENST00000636214 TM4SF5O14894 197 aa18.66■□□□□ 0.58
PNKP-225ENST00000636214 IRAK2O43187 625 aa18.66■□□□□ 0.58
PNKP-225ENST00000636214 THAP12O43422 761 aa18.66■□□□□ 0.58
PNKP-225ENST00000636214 LETM1O95202 739 aaPredicted RBP18.66■□□□□ 0.58
PNKP-225ENST00000636214 KCNK5O95279 499 aa18.66■□□□□ 0.58
PNKP-225ENST00000636214 HOXD9P28356 352 aaPredicted RBP18.66■□□□□ 0.58
PNKP-225ENST00000636214 GNA15P30679 374 aa18.66■□□□□ 0.58
PNKP-225ENST00000636214 USP8P40818 1118 aa18.66■□□□□ 0.58
PNKP-225ENST00000636214 MAPK8P45983 427 aa18.66■□□□□ 0.58
PNKP-225ENST00000636214 MTIF2P46199 727 aaKnown RBP18.66■□□□□ 0.58
PNKP-225ENST00000636214 GFPT1Q06210 699 aaPredicted RBP18.66■□□□□ 0.58
PNKP-225ENST00000636214 FUT11Q495W5 492 aa18.66■□□□□ 0.58
PNKP-225ENST00000636214 PSAPL1Q6NUJ1 521 aa18.66■□□□□ 0.58
PNKP-225ENST00000636214 AHI1Q8N157 1196 aa18.66■□□□□ 0.58
PNKP-225ENST00000636214 CLEC4CQ8WTT0 213 aa18.66■□□□□ 0.58
PNKP-225ENST00000636214 PRCCQ92733 491 aaPredicted RBP18.66■□□□□ 0.58
PNKP-225ENST00000636214 SIPA1Q96FS4 1042 aa18.66■□□□□ 0.58
PNKP-225ENST00000636214 HSPA12BQ96MM6 686 aa18.66■□□□□ 0.58
PNKP-225ENST00000636214 ZSWIM1Q9BR11 485 aa18.66■□□□□ 0.58
PNKP-225ENST00000636214 CRACR2AQ9BSW2 395 aa18.66■□□□□ 0.58
PNKP-225ENST00000636214 SUSD2Q9UGT4 822 aa18.66■□□□□ 0.58
PNKP-225ENST00000636214 PILRBQ9UKJ0 227 aa18.66■□□□□ 0.58
PNKP-225ENST00000636214 CACNA1BQ00975 2339 aa18.66■□□□□ 0.58
PNKP-225ENST00000636214 CHD8Q9HCK8 2581 aa18.65■□□□□ 0.58
PNKP-225ENST00000636214 MEI4A8MW99 385 aa18.65■□□□□ 0.58
PNKP-225ENST00000636214 CALCAP01258 141 aa18.65■□□□□ 0.58
PNKP-225ENST00000636214 GNSP15586 552 aa18.65■□□□□ 0.58
PNKP-225ENST00000636214 CD6P30203 668 aa18.65■□□□□ 0.58
PNKP-225ENST00000636214 RING1Q06587 406 aa18.65■□□□□ 0.58
PNKP-225ENST00000636214 WDR45BQ5MNZ6 344 aa18.65■□□□□ 0.58
PNKP-225ENST00000636214 SLC23A3Q6PIS1 610 aa18.65■□□□□ 0.58
PNKP-225ENST00000636214 GBP6Q6ZN66 633 aa18.65■□□□□ 0.58
PNKP-225ENST00000636214 CHST9Q7L1S5 443 aa18.65■□□□□ 0.58
PNKP-225ENST00000636214 HDDC3Q8N4P3 179 aa18.65■□□□□ 0.58
PNKP-225ENST00000636214 P2RY11Q96G91 374 aa18.65■□□□□ 0.58
PNKP-225ENST00000636214 KREMEN1Q96MU8 473 aa18.65■□□□□ 0.58
PNKP-225ENST00000636214 GTPBP2Q9BX10 602 aaKnown RBP18.65■□□□□ 0.58
PNKP-225ENST00000636214 IRX2Q9BZI1 471 aaPredicted RBP18.65■□□□□ 0.58
PNKP-225ENST00000636214 SLC6A17Q9H1V8 727 aa18.65■□□□□ 0.58
PNKP-225ENST00000636214 TMEM74BQ9NUR3 256 aa18.65■□□□□ 0.58
PNKP-225ENST00000636214 GGA2Q9UJY4 613 aa18.65■□□□□ 0.58
PNKP-225ENST00000636214 STOML2Q9UJZ1 356 aa18.65■□□□□ 0.58
PNKP-225ENST00000636214 CLEC4EQ9ULY5 219 aa18.65■□□□□ 0.58
PNKP-225ENST00000636214 SLC6A14Q9UN76 642 aa18.65■□□□□ 0.58
PNKP-225ENST00000636214 EPG5Q9HCE0 2579 aa18.64■□□□□ 0.57
PNKP-225ENST00000636214 ACSL4O60488 711 aa18.64■□□□□ 0.57
PNKP-225ENST00000636214 TBL1XO60907 577 aa18.64■□□□□ 0.57
PNKP-225ENST00000636214 APOEP02649 317 aa18.64■□□□□ 0.57
PNKP-225ENST00000636214 ATP5BP06576 529 aaKnown RBP18.64■□□□□ 0.57
PNKP-225ENST00000636214 PABPC1P11940 636 aaKnown RBP18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms