RNA–Protein interactions for RNA: ENST00000630543.2

NRXN1-233, Transcript of neurexin 1, human

TSL 5 BASIC

Gene NRXN1, Length 4,500 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRXN1-233	ENST00000630543	DCLK2	Q8N568	766 aa		13.71	□□□□□ -0.21
NRXN1-233	ENST00000630543	SLC35F5	Q8WV83	523 aa		13.71	□□□□□ -0.21
NRXN1-233	ENST00000630543	CPSF2	Q9P2I0	782 aa	Known RBP	13.71	□□□□□ -0.21
NRXN1-233	ENST00000630543	NENF	Q9UMX5	172 aa		13.71	□□□□□ -0.21
NRXN1-233	ENST00000630543	PIR	O00625	290 aa		13.71	□□□□□ -0.22
NRXN1-233	ENST00000630543	PTGES	O14684	152 aa		13.71	□□□□□ -0.22
NRXN1-233	ENST00000630543	ENDOD1	O94919	500 aa		13.71	□□□□□ -0.22
NRXN1-233	ENST00000630543	DNAJC3	Q13217	504 aa		13.71	□□□□□ -0.22
NRXN1-233	ENST00000630543	BTG3	Q14201	252 aa	Predicted RBP	13.71	□□□□□ -0.22
NRXN1-233	ENST00000630543	ZDHHC14	Q8IZN3	488 aa		13.71	□□□□□ -0.22
NRXN1-233	ENST00000630543	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	13.71	□□□□□ -0.22
NRXN1-233	ENST00000630543	HAUS2	Q9NVX0	235 aa		13.71	□□□□□ -0.22
NRXN1-233	ENST00000630543	PSD3	Q9NYI0	1048 aa		13.71	□□□□□ -0.22
NRXN1-233	ENST00000630543	G3BP2	Q9UN86	482 aa	Known RBP	13.71	□□□□□ -0.22
NRXN1-233	ENST00000630543		A0A0U1RQF3	1178 aa		13.71	□□□□□ -0.22
NRXN1-233	ENST00000630543	CKB	P12277	381 aa		13.71	□□□□□ -0.22
NRXN1-233	ENST00000630543	YWHAQ	P27348	245 aa		13.71	□□□□□ -0.22
NRXN1-233	ENST00000630543	ARHGAP17	Q68EM7	881 aa		13.71	□□□□□ -0.22
NRXN1-233	ENST00000630543	TRIM68	Q6AZZ1	485 aa		13.71	□□□□□ -0.22
NRXN1-233	ENST00000630543	LVRN	Q6Q4G3	990 aa		13.71	□□□□□ -0.22
NRXN1-233	ENST00000630543	LRRC6	Q86X45	466 aa		13.71	□□□□□ -0.22
NRXN1-233	ENST00000630543	RNF135	Q8IUD6	432 aa		13.71	□□□□□ -0.22
NRXN1-233	ENST00000630543	PPP4R1	Q8TF05	950 aa		13.71	□□□□□ -0.22
NRXN1-233	ENST00000630543	PEBP4	Q96S96	227 aa		13.71	□□□□□ -0.22
NRXN1-233	ENST00000630543	MAGEB5	Q9BZ81	275 aa		13.71	□□□□□ -0.22
NRXN1-233	ENST00000630543	ETNK2	Q9NVF9	386 aa		13.71	□□□□□ -0.22
NRXN1-233	ENST00000630543	BEST1	O76090	585 aa		13.7	□□□□□ -0.22
NRXN1-233	ENST00000630543	WARS	P23381	471 aa	Known RBP	13.7	□□□□□ -0.22
NRXN1-233	ENST00000630543	GCK	P35557	465 aa		13.7	□□□□□ -0.22
NRXN1-233	ENST00000630543	ZNF252P-AS1	Q0IIN9	211 aa		13.7	□□□□□ -0.22
NRXN1-233	ENST00000630543	AUH	Q13825	339 aa	Known RBP	13.7	□□□□□ -0.22
NRXN1-233	ENST00000630543	SLC45A4	Q5BKX6	768 aa		13.7	□□□□□ -0.22
NRXN1-233	ENST00000630543	C6orf163	Q5TEZ5	329 aa		13.7	□□□□□ -0.22
NRXN1-233	ENST00000630543	OLFML1	Q6UWY5	402 aa		13.7	□□□□□ -0.22
NRXN1-233	ENST00000630543	SLAIN1	Q8ND83	568 aa		13.7	□□□□□ -0.22
NRXN1-233	ENST00000630543	PCDH19	Q8TAB3	1148 aa		13.7	□□□□□ -0.22
NRXN1-233	ENST00000630543	AGR3	Q8TD06	166 aa		13.7	□□□□□ -0.22
NRXN1-233	ENST00000630543	EXT2	Q93063	718 aa		13.7	□□□□□ -0.22
NRXN1-233	ENST00000630543	CNGB3	Q9NQW8	809 aa		13.7	□□□□□ -0.22
NRXN1-233	ENST00000630543	CNTN6	Q9UQ52	1028 aa		13.7	□□□□□ -0.22
NRXN1-233	ENST00000630543	SSX2IP	Q9Y2D8	614 aa		13.7	□□□□□ -0.22
NRXN1-233	ENST00000630543	PSMB4	P28070	264 aa		13.7	□□□□□ -0.22
NRXN1-233	ENST00000630543	HDAC4	P56524	1084 aa		13.7	□□□□□ -0.22
NRXN1-233	ENST00000630543	TBX4	P57082	545 aa		13.7	□□□□□ -0.22
NRXN1-233	ENST00000630543	POU5F1	Q01860	360 aa	Known RBP	13.7	□□□□□ -0.22
NRXN1-233	ENST00000630543	HIC1	Q14526	733 aa		13.7	□□□□□ -0.22
NRXN1-233	ENST00000630543	INTS6L	Q5JSJ4	861 aa	Known RBP	13.7	□□□□□ -0.22
NRXN1-233	ENST00000630543	UBXN11	Q5T124	520 aa		13.7	□□□□□ -0.22
NRXN1-233	ENST00000630543	RFX8	Q6ZV50	586 aa		13.7	□□□□□ -0.22
NRXN1-233	ENST00000630543	MCU	Q8NE86	351 aa		13.7	□□□□□ -0.22
NRXN1-233	ENST00000630543	ZNF296	Q8WUU4	475 aa	Predicted RBP	13.7	□□□□□ -0.22
NRXN1-233	ENST00000630543	ZNF670	Q9BS34	389 aa		13.7	□□□□□ -0.22
NRXN1-233	ENST00000630543	SLC4A5	Q9BY07	1137 aa		13.7	□□□□□ -0.22
NRXN1-233	ENST00000630543	C20orf96	Q9NUD7	363 aa	Predicted RBP	13.7	□□□□□ -0.22
NRXN1-233	ENST00000630543	WDR27	A2RRH5	827 aa		13.7	□□□□□ -0.22
NRXN1-233	ENST00000630543	GOLGA8T	H3BQL2	631 aa		13.7	□□□□□ -0.22
NRXN1-233	ENST00000630543	HOXA2	O43364	376 aa		13.7	□□□□□ -0.22
NRXN1-233	ENST00000630543	DAB1	O75553	588 aa		13.7	□□□□□ -0.22
NRXN1-233	ENST00000630543	RPL17	P18621	184 aa	Known RBP	13.7	□□□□□ -0.22
NRXN1-233	ENST00000630543	GATM	P50440	423 aa		13.7	□□□□□ -0.22
NRXN1-233	ENST00000630543	PITX1	P78337	314 aa	Predicted RBP	13.7	□□□□□ -0.22
NRXN1-233	ENST00000630543	RCN2	Q14257	317 aa		13.7	□□□□□ -0.22
NRXN1-233	ENST00000630543	CRYBG2	Q8N1P7	616 aa		13.7	□□□□□ -0.22
NRXN1-233	ENST00000630543	TMEM174	Q8WUU8	243 aa		13.7	□□□□□ -0.22
NRXN1-233	ENST00000630543	RSPH1	Q8WYR4	309 aa		13.7	□□□□□ -0.22
NRXN1-233	ENST00000630543	RMDN1	Q96DB5	314 aa		13.7	□□□□□ -0.22
NRXN1-233	ENST00000630543	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	13.7	□□□□□ -0.22
NRXN1-233	ENST00000630543	MGAT1	P26572	445 aa		13.69	□□□□□ -0.22
NRXN1-233	ENST00000630543	CYP2C18	P33260	490 aa		13.69	□□□□□ -0.22
NRXN1-233	ENST00000630543	SLC25A11	Q02978	314 aa	Known RBP	13.69	□□□□□ -0.22
NRXN1-233	ENST00000630543	DUSP4	Q13115	394 aa		13.69	□□□□□ -0.22
NRXN1-233	ENST00000630543	NOMO1	Q15155	1222 aa		13.69	□□□□□ -0.22
NRXN1-233	ENST00000630543	GCNA	Q96QF7	691 aa		13.69	□□□□□ -0.22
NRXN1-233	ENST00000630543	CCDC68	Q9H2F9	335 aa		13.69	□□□□□ -0.22
NRXN1-233	ENST00000630543	ZDHHC18	Q9NUE0	388 aa		13.69	□□□□□ -0.22
NRXN1-233	ENST00000630543	MPP6	Q9NZW5	540 aa		13.69	□□□□□ -0.22
NRXN1-233	ENST00000630543		A0A1W2PQ45	241 aa	Predicted RBP	13.69	□□□□□ -0.22
NRXN1-233	ENST00000630543		A0A1W2PQY0	241 aa		13.69	□□□□□ -0.22
NRXN1-233	ENST00000630543	MOXD2P	A6NHM9	499 aa		13.69	□□□□□ -0.22
NRXN1-233	ENST00000630543	ADRA1B	P35368	520 aa		13.69	□□□□□ -0.22
NRXN1-233	ENST00000630543	SLC5A3	P53794	718 aa		13.69	□□□□□ -0.22
NRXN1-233	ENST00000630543	EFTUD2	Q15029	972 aa	Known RBP eCLIP	13.69	□□□□□ -0.22
NRXN1-233	ENST00000630543	CYP1B1	Q16678	543 aa		13.69	□□□□□ -0.22
NRXN1-233	ENST00000630543	ANKRD20A2	Q5SQ80	823 aa		13.69	□□□□□ -0.22
NRXN1-233	ENST00000630543	ANKRD20A1	Q5TYW2	823 aa		13.69	□□□□□ -0.22
NRXN1-233	ENST00000630543	NXN	Q6DKJ4	435 aa		13.69	□□□□□ -0.22
NRXN1-233	ENST00000630543	TMEM110	Q86TL2	294 aa		13.69	□□□□□ -0.22
NRXN1-233	ENST00000630543	NDUFAF2	Q8N183	169 aa		13.69	□□□□□ -0.22
NRXN1-233	ENST00000630543	C12orf50	Q8NA57	414 aa	Predicted RBP	13.69	□□□□□ -0.22
NRXN1-233	ENST00000630543	XAB2	Q9HCS7	855 aa	Known RBP	13.69	□□□□□ -0.22
NRXN1-233	ENST00000630543	MARCO	Q9UEW3	520 aa	Predicted RBP	13.69	□□□□□ -0.22
NRXN1-233	ENST00000630543		H7C4K7	107 aa		13.69	□□□□□ -0.22
NRXN1-233	ENST00000630543	MFSD11	O43934	449 aa		13.69	□□□□□ -0.22
NRXN1-233	ENST00000630543	PML	P29590	882 aa		13.69	□□□□□ -0.22
NRXN1-233	ENST00000630543	HARS2	P49590	506 aa	Known RBP	13.69	□□□□□ -0.22
NRXN1-233	ENST00000630543	ZNF280B	Q86YH2	543 aa		13.69	□□□□□ -0.22
NRXN1-233	ENST00000630543	USP6NL	Q92738	828 aa		13.69	□□□□□ -0.22
NRXN1-233	ENST00000630543	TMEM209	Q96SK2	561 aa		13.69	□□□□□ -0.22
NRXN1-233	ENST00000630543	CRTAC1	Q9NQ79	661 aa		13.69	□□□□□ -0.22
NRXN1-233	ENST00000630543	DONSON	Q9NYP3	566 aa		13.69	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms