RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 COL2A1P02458 1487 aaPredicted RBP14.54□□□□□ -0.08
LDB3-209ENST00000623056 TCP10L2B9ZVM9 353 aa14.54□□□□□ -0.08
LDB3-209ENST00000623056 ZBTB14O43829 449 aa14.54□□□□□ -0.08
LDB3-209ENST00000623056 TRMUO75648 421 aaKnown RBP14.54□□□□□ -0.08
LDB3-209ENST00000623056 PIGRP01833 764 aa14.54□□□□□ -0.08
LDB3-209ENST00000623056 EDN1P05305 212 aa14.54□□□□□ -0.08
LDB3-209ENST00000623056 RBL1P28749 1068 aa14.54□□□□□ -0.08
LDB3-209ENST00000623056 TGFB2P61812 414 aa14.54□□□□□ -0.08
LDB3-209ENST00000623056 PRKCEQ02156 737 aa14.54□□□□□ -0.08
LDB3-209ENST00000623056 TFDP2Q14188 446 aa14.54□□□□□ -0.08
LDB3-209ENST00000623056 ADGRE1Q14246 886 aa14.54□□□□□ -0.08
LDB3-209ENST00000623056 USP41Q3LFD5 358 aa14.54□□□□□ -0.08
LDB3-209ENST00000623056 TSHZ1Q6ZSZ6 1077 aa14.54□□□□□ -0.08
LDB3-209ENST00000623056 DDI1Q8WTU0 396 aa14.54□□□□□ -0.08
LDB3-209ENST00000623056 TMEM143Q96AN5 459 aa14.54□□□□□ -0.08
LDB3-209ENST00000623056 RMDN3Q96TC7 470 aa14.54□□□□□ -0.08
LDB3-209ENST00000623056 PDCD2LQ9BRP1 358 aa14.54□□□□□ -0.08
LDB3-209ENST00000623056 RTKNQ9BST9 563 aa14.54□□□□□ -0.08
LDB3-209ENST00000623056 MTMR12Q9C0I1 747 aa14.54□□□□□ -0.08
LDB3-209ENST00000623056 STK39Q9UEW8 545 aa14.54□□□□□ -0.08
LDB3-209ENST00000623056 FBXO40Q9UH90 709 aa14.54□□□□□ -0.08
LDB3-209ENST00000623056 ADGRA2Q96PE1 1338 aa14.53□□□□□ -0.08
LDB3-209ENST00000623056 H3BSA7 217 aa14.53□□□□□ -0.08
LDB3-209ENST00000623056 GLRA3O75311 464 aa14.53□□□□□ -0.08
LDB3-209ENST00000623056 ENDOD1O94919 500 aa14.53□□□□□ -0.08
LDB3-209ENST00000623056 ALDOAP04075 364 aaKnown RBP14.53□□□□□ -0.08
LDB3-209ENST00000623056 ERBB2P04626 1255 aa14.53□□□□□ -0.08
LDB3-209ENST00000623056 FAM163BP0C2L3 166 aa14.53□□□□□ -0.08
LDB3-209ENST00000623056 FAM58BPP0C7Q3 252 aa14.53□□□□□ -0.08
LDB3-209ENST00000623056 MAGEA3P43357 314 aa14.53□□□□□ -0.08
LDB3-209ENST00000623056 SFSWAPQ12872 951 aaKnown RBP14.53□□□□□ -0.08
LDB3-209ENST00000623056 PDE1CQ14123 709 aaPredicted RBP14.53□□□□□ -0.08
LDB3-209ENST00000623056 FAM47CQ5HY64 1035 aa14.53□□□□□ -0.08
LDB3-209ENST00000623056 C6orf52Q5T4I8 152 aa14.53□□□□□ -0.08
LDB3-209ENST00000623056 ZNF534Q76KX8 674 aa14.53□□□□□ -0.08
LDB3-209ENST00000623056 TICAM1Q8IUC6 712 aa14.53□□□□□ -0.08
LDB3-209ENST00000623056 MAML3Q96JK9 1138 aa14.53□□□□□ -0.08
LDB3-209ENST00000623056 PHF12Q96QT6 1004 aa14.53□□□□□ -0.08
LDB3-209ENST00000623056 RAVER2Q9HCJ3 691 aaKnown RBP14.53□□□□□ -0.08
LDB3-209ENST00000623056 BTBD7Q9P203 1132 aa14.53□□□□□ -0.08
LDB3-209ENST00000623056 SLC17A6Q9P2U8 582 aa14.53□□□□□ -0.08
LDB3-209ENST00000623056 RIMS3Q9UJD0 308 aa14.53□□□□□ -0.08
LDB3-209ENST00000623056 GNEQ9Y223 722 aaKnown RBP14.53□□□□□ -0.08
LDB3-209ENST00000623056 K7ERI5 159 aa14.53□□□□□ -0.08
LDB3-209ENST00000623056 TPP1O14773 563 aa14.53□□□□□ -0.08
LDB3-209ENST00000623056 MAGEB3O15480 346 aa14.53□□□□□ -0.08
LDB3-209ENST00000623056 ZBED1O96006 694 aa14.53□□□□□ -0.08
LDB3-209ENST00000623056 CD19P15391 556 aa14.53□□□□□ -0.08
LDB3-209ENST00000623056 GRK2P25098 689 aa14.53□□□□□ -0.08
LDB3-209ENST00000623056 NR1H2P55055 460 aa14.53□□□□□ -0.08
LDB3-209ENST00000623056 ABCE1P61221 599 aaKnown RBP14.53□□□□□ -0.08
LDB3-209ENST00000623056 MRPS22P82650 360 aaKnown RBP14.53□□□□□ -0.08
LDB3-209ENST00000623056 SP4Q02446 784 aa14.53□□□□□ -0.08
LDB3-209ENST00000623056 KLF10Q13118 480 aa14.53□□□□□ -0.08
LDB3-209ENST00000623056 EMC2Q15006 297 aa14.53□□□□□ -0.08
LDB3-209ENST00000623056 MTERF2Q49AM1 385 aa14.53□□□□□ -0.08
LDB3-209ENST00000623056 FSCBQ5H9T9 825 aa14.53□□□□□ -0.08
LDB3-209ENST00000623056 NUP93Q8N1F7 819 aa14.53□□□□□ -0.08
LDB3-209ENST00000623056 PLD5Q8N7P1 536 aa14.53□□□□□ -0.08
LDB3-209ENST00000623056 SLC4A11Q8NBS3 891 aa14.53□□□□□ -0.08
LDB3-209ENST00000623056 MCUQ8NE86 351 aa14.53□□□□□ -0.08
LDB3-209ENST00000623056 CATSPER1Q8NEC5 780 aa14.53□□□□□ -0.08
LDB3-209ENST00000623056 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.53□□□□□ -0.08
LDB3-209ENST00000623056 LRRN4Q8WUT4 740 aa14.53□□□□□ -0.08
LDB3-209ENST00000623056 PXMP2Q9NR77 195 aa14.53□□□□□ -0.08
LDB3-209ENST00000623056 PCDHA11Q9Y5I1 949 aa14.53□□□□□ -0.08
LDB3-209ENST00000623056 CEPT1Q9Y6K0 416 aa14.53□□□□□ -0.08
LDB3-209ENST00000623056 LRRIQ4A6NIV6 560 aa14.52□□□□□ -0.08
LDB3-209ENST00000623056 E9PBE3 544 aa14.52□□□□□ -0.08
LDB3-209ENST00000623056 KLHL41O60662 606 aa14.52□□□□□ -0.08
LDB3-209ENST00000623056 MAP3K6O95382 1288 aa14.52□□□□□ -0.08
LDB3-209ENST00000623056 PRKCGP05129 697 aa14.52□□□□□ -0.08
LDB3-209ENST00000623056 HNRNPCP07910 306 aaKnown RBP eCLIP14.52□□□□□ -0.08
LDB3-209ENST00000623056 CDH2P19022 906 aaPredicted RBP14.52□□□□□ -0.08
LDB3-209ENST00000623056 CNTFP26441 200 aa14.52□□□□□ -0.08
LDB3-209ENST00000623056 ADORA2AP29274 412 aa14.52□□□□□ -0.08
LDB3-209ENST00000623056 CDKL1Q00532 357 aa14.52□□□□□ -0.08
LDB3-209ENST00000623056 CREB5Q02930 508 aa14.52□□□□□ -0.08
LDB3-209ENST00000623056 RAB6CQ53S08 254 aa14.52□□□□□ -0.08
LDB3-209ENST00000623056 SH3PXD2AQ5TCZ1 1133 aa14.52□□□□□ -0.08
LDB3-209ENST00000623056 CYP4V2Q6ZWL3 525 aaPredicted RBP14.52□□□□□ -0.08
LDB3-209ENST00000623056 ZNF554Q86TJ5 538 aa14.52□□□□□ -0.08
LDB3-209ENST00000623056 UNC5BQ8IZJ1 945 aa14.52□□□□□ -0.08
LDB3-209ENST00000623056 TTLL6Q8N841 843 aa14.52□□□□□ -0.08
LDB3-209ENST00000623056 ADCY4Q8NFM4 1077 aa14.52□□□□□ -0.08
LDB3-209ENST00000623056 ACMSDQ8TDX5 336 aa14.52□□□□□ -0.08
LDB3-209ENST00000623056 SNRNP27Q8WVK2 155 aaKnown RBP14.52□□□□□ -0.08
LDB3-209ENST00000623056 PPP1R14BQ96C90 147 aa14.52□□□□□ -0.08
LDB3-209ENST00000623056 RAB6CQ9H0N0 254 aa14.52□□□□□ -0.08
LDB3-209ENST00000623056 MAN1C1Q9NR34 630 aa14.52□□□□□ -0.08
LDB3-209ENST00000623056 THEGQ9P2T0 379 aa14.52□□□□□ -0.08
LDB3-209ENST00000623056 BLOC1S6Q9UL45 172 aa14.52□□□□□ -0.08
LDB3-209ENST00000623056 PCDHGA4Q9Y5G9 962 aa14.52□□□□□ -0.08
LDB3-209ENST00000623056 HEY1Q9Y5J3 304 aa14.52□□□□□ -0.08
LDB3-209ENST00000623056 UTRNP46939 3433 aa14.52□□□□□ -0.08
LDB3-209ENST00000623056 TNFSF9P41273 254 aa14.52□□□□□ -0.09
LDB3-209ENST00000623056 HARS2P49590 506 aaKnown RBP14.52□□□□□ -0.09
LDB3-209ENST00000623056 PPIDQ08752 370 aaKnown RBP14.52□□□□□ -0.09
LDB3-209ENST00000623056 SH3D19Q5HYK7 790 aa14.52□□□□□ -0.09
LDB3-209ENST00000623056 AMIGO2Q86SJ2 522 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms