RNA–Protein interactions for RNA: ENST00000622645.4

TP53-227, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,653 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-227ENST00000622645 C4orf22Q6V702 233 aa12.36□□□□□ -0.43
TP53-227ENST00000622645 HFE2Q6ZVN8 426 aa12.36□□□□□ -0.43
TP53-227ENST00000622645 ARMC2Q8NEN0 867 aa12.36□□□□□ -0.43
TP53-227ENST00000622645 OXNAD1Q96HP4 312 aaPredicted RBP12.36□□□□□ -0.43
TP53-227ENST00000622645 HNRNPABQ99729 332 aaKnown RBP12.36□□□□□ -0.43
TP53-227ENST00000622645 SLC17A6Q9P2U8 582 aa12.36□□□□□ -0.43
TP53-227ENST00000622645 HEY2Q9UBP5 337 aa12.36□□□□□ -0.43
TP53-227ENST00000622645 PLLPQ9Y342 182 aa12.36□□□□□ -0.43
TP53-227ENST00000622645 DOCK3Q8IZD9 2030 aa12.36□□□□□ -0.43
TP53-227ENST00000622645 WDR27A2RRH5 827 aa12.35□□□□□ -0.43
TP53-227ENST00000622645 M0QYT0 321 aa12.35□□□□□ -0.43
TP53-227ENST00000622645 PTPN1P18031 435 aaKnown RBP12.35□□□□□ -0.43
TP53-227ENST00000622645 AFF1P51825 1210 aaKnown RBP12.35□□□□□ -0.43
TP53-227ENST00000622645 CTC1Q2NKJ3 1217 aa12.35□□□□□ -0.43
TP53-227ENST00000622645 NBPF20Q3BBV1 942 aa12.35□□□□□ -0.43
TP53-227ENST00000622645 LGSNQ5TDP6 509 aa12.35□□□□□ -0.43
TP53-227ENST00000622645 BSPRYQ5W0U4 402 aa12.35□□□□□ -0.43
TP53-227ENST00000622645 CASC4Q6P4E1 433 aa12.35□□□□□ -0.43
TP53-227ENST00000622645 COLGALT1Q8NBJ5 622 aa12.35□□□□□ -0.43
TP53-227ENST00000622645 ADAM32Q8TC27 787 aa12.35□□□□□ -0.43
TP53-227ENST00000622645 RNF139Q8WU17 664 aa12.35□□□□□ -0.43
TP53-227ENST00000622645 PRR11Q96HE9 360 aaPredicted RBP12.35□□□□□ -0.43
TP53-227ENST00000622645 TBC1D10AQ9BXI6 508 aa12.35□□□□□ -0.43
TP53-227ENST00000622645 FBXO6Q9NRD1 293 aaPredicted RBP12.35□□□□□ -0.43
TP53-227ENST00000622645 PCMTD2Q9NV79 361 aa12.35□□□□□ -0.43
TP53-227ENST00000622645 SEPT10Q9P0V9 454 aa12.35□□□□□ -0.43
TP53-227ENST00000622645 RALGAPA2Q2PPJ7 1873 aa12.35□□□□□ -0.43
TP53-227ENST00000622645 TRIP12Q14669 1992 aaPredicted RBP12.35□□□□□ -0.43
TP53-227ENST00000622645 MYO18AQ92614 2054 aaKnown RBP12.35□□□□□ -0.43
TP53-227ENST00000622645 A0A0A0MRY4 1105 aa12.35□□□□□ -0.43
TP53-227ENST00000622645 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.35□□□□□ -0.43
TP53-227ENST00000622645 UNCXA6NJT0 531 aa12.35□□□□□ -0.43
TP53-227ENST00000622645 FAM159BA6NKW6 160 aa12.35□□□□□ -0.43
TP53-227ENST00000622645 HAS3O00219 553 aa12.35□□□□□ -0.43
TP53-227ENST00000622645 DLDP09622 509 aaKnown RBP12.35□□□□□ -0.43
TP53-227ENST00000622645 RARBP10826 455 aa12.35□□□□□ -0.43
TP53-227ENST00000622645 NPR3P17342 541 aa12.35□□□□□ -0.43
TP53-227ENST00000622645 SERPINB3P29508 390 aa12.35□□□□□ -0.43
TP53-227ENST00000622645 ARFIP2P53365 341 aa12.35□□□□□ -0.43
TP53-227ENST00000622645 MAP3K7CLP57077 242 aa12.35□□□□□ -0.43
TP53-227ENST00000622645 SLC8A3P57103 927 aa12.35□□□□□ -0.43
TP53-227ENST00000622645 SESN2P58004 480 aaPredicted RBP12.35□□□□□ -0.43
TP53-227ENST00000622645 MDH1BQ5I0G3 518 aa12.35□□□□□ -0.43
TP53-227ENST00000622645 CLEC20AQ6ZU45 233 aa12.35□□□□□ -0.43
TP53-227ENST00000622645 CTU1Q7Z7A3 348 aaKnown RBP12.35□□□□□ -0.43
TP53-227ENST00000622645 RNF169Q8NCN4 708 aa12.35□□□□□ -0.43
TP53-227ENST00000622645 CCNYQ8ND76 341 aa12.35□□□□□ -0.43
TP53-227ENST00000622645 ZNF398Q8TD17 642 aa12.35□□□□□ -0.43
TP53-227ENST00000622645 P2RY11Q96G91 374 aa12.35□□□□□ -0.43
TP53-227ENST00000622645 SPATA13Q96N96 652 aa12.35□□□□□ -0.43
TP53-227ENST00000622645 MYCBPQ99417 103 aaPredicted RBP12.35□□□□□ -0.43
TP53-227ENST00000622645 ZNF395Q9H8N7 513 aaPredicted RBP12.35□□□□□ -0.43
TP53-227ENST00000622645 LRRC4Q9HBW1 653 aa12.35□□□□□ -0.43
TP53-227ENST00000622645 XAB2Q9HCS7 855 aaKnown RBP12.35□□□□□ -0.43
TP53-227ENST00000622645 FAM237BA0A1B0GVD1 139 aa12.34□□□□□ -0.43
TP53-227ENST00000622645 RNF103O00237 685 aa12.34□□□□□ -0.43
TP53-227ENST00000622645 KRT38O76015 456 aa12.34□□□□□ -0.43
TP53-227ENST00000622645 WARSP23381 471 aaKnown RBP12.34□□□□□ -0.43
TP53-227ENST00000622645 EPHB2P29323 1055 aa12.34□□□□□ -0.43
TP53-227ENST00000622645 CRYBB1P53674 252 aaPredicted RBP12.34□□□□□ -0.43
TP53-227ENST00000622645 MAP2K5Q13163 448 aa12.34□□□□□ -0.43
TP53-227ENST00000622645 MORN1Q5T089 497 aa12.34□□□□□ -0.43
TP53-227ENST00000622645 CES4AQ5XG92 561 aa12.34□□□□□ -0.43
TP53-227ENST00000622645 NDUFAF2Q8N183 169 aa12.34□□□□□ -0.43
TP53-227ENST00000622645 NME8Q8N427 588 aa12.34□□□□□ -0.43
TP53-227ENST00000622645 TOP6BLQ8N6T0 577 aa12.34□□□□□ -0.43
TP53-227ENST00000622645 DEPDC1BQ8WUY9 529 aa12.34□□□□□ -0.43
TP53-227ENST00000622645 RAB3IPQ96QF0 476 aaPredicted RBP12.34□□□□□ -0.43
TP53-227ENST00000622645 NPY6RQ99463 290 aa12.34□□□□□ -0.43
TP53-227ENST00000622645 MED10Q9BTT4 135 aa12.34□□□□□ -0.43
TP53-227ENST00000622645 TMEM120AQ9BXJ8 343 aa12.34□□□□□ -0.43
TP53-227ENST00000622645 PIGVQ9NUD9 493 aa12.34□□□□□ -0.43
TP53-227ENST00000622645 MCM8Q9UJA3 840 aa12.34□□□□□ -0.43
TP53-227ENST00000622645 PCDHA11Q9Y5I1 949 aa12.34□□□□□ -0.43
TP53-227ENST00000622645 TIMM13Q9Y5L4 95 aaPredicted RBP12.34□□□□□ -0.43
TP53-227ENST00000622645 CCDC195A0A1B0GUA6 201 aa12.34□□□□□ -0.43
TP53-227ENST00000622645 NRP1O14786 923 aa12.34□□□□□ -0.43
TP53-227ENST00000622645 TOMM70O94826 608 aa12.34□□□□□ -0.43
TP53-227ENST00000622645 ANP32DO95626 131 aa12.34□□□□□ -0.43
TP53-227ENST00000622645 CYP2B6P20813 491 aa12.34□□□□□ -0.43
TP53-227ENST00000622645 NOS2P35228 1153 aa12.34□□□□□ -0.43
TP53-227ENST00000622645 TKTL1P51854 596 aa12.34□□□□□ -0.43
TP53-227ENST00000622645 PARP6Q2NL67 630 aa12.34□□□□□ -0.43
TP53-227ENST00000622645 LONP2Q86WA8 852 aa12.34□□□□□ -0.43
TP53-227ENST00000622645 SIX6OS1Q8N1H7 587 aa12.34□□□□□ -0.43
TP53-227ENST00000622645 INPP5DQ92835 1189 aa12.34□□□□□ -0.43
TP53-227ENST00000622645 NT5C3BQ969T7 300 aa12.34□□□□□ -0.43
TP53-227ENST00000622645 PGLYRP2Q96PD5 576 aa12.34□□□□□ -0.43
TP53-227ENST00000622645 KCNK16Q96T55 309 aa12.34□□□□□ -0.43
TP53-227ENST00000622645 PRDM12Q9H4Q4 367 aa12.34□□□□□ -0.43
TP53-227ENST00000622645 MOCS1Q9NZB8 636 aa12.34□□□□□ -0.43
TP53-227ENST00000622645 FAM72CH0Y354 149 aa12.34□□□□□ -0.43
TP53-227ENST00000622645 DAB1O75553 588 aa12.34□□□□□ -0.43
TP53-227ENST00000622645 AMHP03971 560 aa12.34□□□□□ -0.43
TP53-227ENST00000622645 GSTA2P09210 222 aa12.34□□□□□ -0.43
TP53-227ENST00000622645 MYL2P10916 166 aa12.34□□□□□ -0.43
TP53-227ENST00000622645 BST1Q10588 318 aa12.34□□□□□ -0.43
TP53-227ENST00000622645 OLIG2Q13516 323 aa12.34□□□□□ -0.43
TP53-227ENST00000622645 FAM72AQ5TYM5 149 aa12.34□□□□□ -0.43
TP53-227ENST00000622645 FAM72DQ6L9T8 149 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms