RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 HECTD3Q5T447 861 aa5.48□□□□□ -1.53
SHMT1-211ENST00000618902 OTUD1Q5VV17 481 aaPredicted RBP5.48□□□□□ -1.53
SHMT1-211ENST00000618902 NAA35Q5VZE5 725 aa5.48□□□□□ -1.53
SHMT1-211ENST00000618902 TRNP1Q6NT89 227 aa5.48□□□□□ -1.53
SHMT1-211ENST00000618902 VITQ6UXI7 678 aa5.48□□□□□ -1.53
SHMT1-211ENST00000618902 FAM183BPQ6ZVS7 135 aa5.48□□□□□ -1.53
SHMT1-211ENST00000618902 BEND5Q7L4P6 421 aa5.48□□□□□ -1.53
SHMT1-211ENST00000618902 PHLDB2Q86SQ0 1253 aa5.48□□□□□ -1.53
SHMT1-211ENST00000618902 C11orf74Q86VG3 221 aa5.48□□□□□ -1.53
SHMT1-211ENST00000618902 XYLT1Q86Y38 959 aa5.48□□□□□ -1.53
SHMT1-211ENST00000618902 C1orf210Q8IVY1 113 aa5.48□□□□□ -1.53
SHMT1-211ENST00000618902 SCUBE3Q8IX30 993 aa5.48□□□□□ -1.53
SHMT1-211ENST00000618902 SPEM1Q8N4L4 309 aa5.48□□□□□ -1.53
SHMT1-211ENST00000618902 CPA6Q8N4T0 437 aa5.48□□□□□ -1.53
SHMT1-211ENST00000618902 ARL14EPQ8N8R7 260 aaPredicted RBP5.48□□□□□ -1.53
SHMT1-211ENST00000618902 EIF1ADQ8N9N8 165 aaKnown RBP5.48□□□□□ -1.53
SHMT1-211ENST00000618902 DTWD2Q8NBA8 298 aa5.48□□□□□ -1.53
SHMT1-211ENST00000618902 TRIM58Q8NG06 486 aa5.48□□□□□ -1.53
SHMT1-211ENST00000618902 SLC30A5Q8TAD4 765 aa5.48□□□□□ -1.53
SHMT1-211ENST00000618902 FAM71BQ8TC56 605 aa5.48□□□□□ -1.53
SHMT1-211ENST00000618902 STK32AQ8WU08 396 aa5.48□□□□□ -1.53
SHMT1-211ENST00000618902 OSCP1Q8WVF1 389 aa5.48□□□□□ -1.53
SHMT1-211ENST00000618902 CPA5Q8WXQ8 436 aa5.48□□□□□ -1.53
SHMT1-211ENST00000618902 EDEM1Q92611 657 aa5.48□□□□□ -1.53
SHMT1-211ENST00000618902 CHFRQ96EP1 664 aa5.48□□□□□ -1.53
SHMT1-211ENST00000618902 ZFYVE19Q96K21 471 aa5.48□□□□□ -1.53
SHMT1-211ENST00000618902 SPAG5Q96R06 1193 aa5.48□□□□□ -1.53
SHMT1-211ENST00000618902 AGPAT1Q99943 283 aa5.48□□□□□ -1.53
SHMT1-211ENST00000618902 FAM83CQ9BQN1 747 aa5.48□□□□□ -1.53
SHMT1-211ENST00000618902 FUT8Q9BYC5 575 aa5.48□□□□□ -1.53
SHMT1-211ENST00000618902 DCLK3Q9C098 648 aa5.48□□□□□ -1.53
SHMT1-211ENST00000618902 MIS12Q9H081 205 aa5.48□□□□□ -1.53
SHMT1-211ENST00000618902 TBC1D17Q9HA65 648 aa5.48□□□□□ -1.53
SHMT1-211ENST00000618902 TRPC7Q9HCX4 862 aa5.48□□□□□ -1.53
SHMT1-211ENST00000618902 LTB4R2Q9NPC1 389 aa5.48□□□□□ -1.53
SHMT1-211ENST00000618902 ST7Q9NRC1 585 aa5.48□□□□□ -1.53
SHMT1-211ENST00000618902 GKN1Q9NS71 199 aa5.48□□□□□ -1.53
SHMT1-211ENST00000618902 OLA1Q9NTK5 396 aaKnown RBP5.48□□□□□ -1.53
SHMT1-211ENST00000618902 SMPD4Q9NXE4 827 aa5.48□□□□□ -1.53
SHMT1-211ENST00000618902 DLGAP2Q9P1A6 1054 aa5.48□□□□□ -1.53
SHMT1-211ENST00000618902 ARHGAP20Q9P2F6 1191 aa5.48□□□□□ -1.53
SHMT1-211ENST00000618902 NAGPAQ9UK23 515 aa5.48□□□□□ -1.53
SHMT1-211ENST00000618902 NENFQ9UMX5 172 aa5.48□□□□□ -1.53
SHMT1-211ENST00000618902 JRKLQ9Y4A0 524 aa5.48□□□□□ -1.53
SHMT1-211ENST00000618902 SAR1BQ9Y6B6 198 aa5.48□□□□□ -1.53
SHMT1-211ENST00000618902 BZW2Q9Y6E2 419 aaKnown RBP5.48□□□□□ -1.53
SHMT1-211ENST00000618902 MYO18AQ92614 2054 aaKnown RBP5.47□□□□□ -1.53
SHMT1-211ENST00000618902 A0A0A0MRY4 1105 aa5.47□□□□□ -1.53
SHMT1-211ENST00000618902 SSU72P8A0A1W2PR75 194 aa5.47□□□□□ -1.53
SHMT1-211ENST00000618902 TCRBV5S1A1TA0A578 114 aa5.47□□□□□ -1.53
SHMT1-211ENST00000618902 KRBA1A5PL33 1030 aa5.47□□□□□ -1.53
SHMT1-211ENST00000618902 OTOL1A6NHN0 477 aaPredicted RBP5.47□□□□□ -1.53
SHMT1-211ENST00000618902 FAM170BA6NMN3 283 aa5.47□□□□□ -1.53
SHMT1-211ENST00000618902 CHURC1-FNTBB4DL54 471 aa5.47□□□□□ -1.53
SHMT1-211ENST00000618902 TRDMT1O14717 391 aaKnown RBP5.47□□□□□ -1.53
SHMT1-211ENST00000618902 LAMTOR5O43504 91 aa5.47□□□□□ -1.53
SHMT1-211ENST00000618902 MED7O43513 233 aa5.47□□□□□ -1.53
SHMT1-211ENST00000618902 TLR5O60602 858 aa5.47□□□□□ -1.53
SHMT1-211ENST00000618902 LRP3O75074 770 aa5.47□□□□□ -1.53
SHMT1-211ENST00000618902 GRAP2O75791 330 aa5.47□□□□□ -1.53
SHMT1-211ENST00000618902 LCA5LO95447 670 aa5.47□□□□□ -1.53
SHMT1-211ENST00000618902 LATS1O95835 1130 aa5.47□□□□□ -1.53
SHMT1-211ENST00000618902 ABL1P00519 1130 aa5.47□□□□□ -1.53
SHMT1-211ENST00000618902 KLKB1P03952 638 aa5.47□□□□□ -1.53
SHMT1-211ENST00000618902 CKMP06732 381 aa5.47□□□□□ -1.53
SHMT1-211ENST00000618902 RARGP13631 454 aa5.47□□□□□ -1.53
SHMT1-211ENST00000618902 ARSAP15289 507 aa5.47□□□□□ -1.53
SHMT1-211ENST00000618902 TCP1P17987 556 aaKnown RBP5.47□□□□□ -1.53
SHMT1-211ENST00000618902 TFE3P19532 575 aaPredicted RBP5.47□□□□□ -1.53
SHMT1-211ENST00000618902 MMP8P22894 467 aa5.47□□□□□ -1.53
SHMT1-211ENST00000618902 GDI1P31150 447 aa5.47□□□□□ -1.53
SHMT1-211ENST00000618902 CHKAP35790 457 aa5.47□□□□□ -1.53
SHMT1-211ENST00000618902 GABRB2P47870 512 aa5.47□□□□□ -1.53
SHMT1-211ENST00000618902 YWHAGP61981 247 aaKnown RBP eCLIP5.47□□□□□ -1.53
SHMT1-211ENST00000618902 COG7P83436 770 aa5.47□□□□□ -1.53
SHMT1-211ENST00000618902 NHLH1Q02575 133 aa5.47□□□□□ -1.53
SHMT1-211ENST00000618902 TNK2Q07912 1038 aa5.47□□□□□ -1.53
SHMT1-211ENST00000618902 SLC20A2Q08357 652 aa5.47□□□□□ -1.53
SHMT1-211ENST00000618902 KIF5AQ12840 1032 aa5.47□□□□□ -1.53
SHMT1-211ENST00000618902 IFI16Q16666 785 aaKnown RBP5.47□□□□□ -1.53
SHMT1-211ENST00000618902 LONRF2Q1L5Z9 754 aa5.47□□□□□ -1.53
SHMT1-211ENST00000618902 ASTE1Q2TB18 679 aaPredicted RBP5.47□□□□□ -1.53
SHMT1-211ENST00000618902 GAB4Q2WGN9 574 aa5.47□□□□□ -1.53
SHMT1-211ENST00000618902 RAB6CQ53S08 254 aa5.47□□□□□ -1.53
SHMT1-211ENST00000618902 BEND6Q5SZJ8 279 aaPredicted RBP5.47□□□□□ -1.53
SHMT1-211ENST00000618902 ARTNQ5T4W7 220 aa5.47□□□□□ -1.53
SHMT1-211ENST00000618902 SFMBT2Q5VUG0 894 aa5.47□□□□□ -1.53
SHMT1-211ENST00000618902 SYPL2Q5VXT5 272 aa5.47□□□□□ -1.53
SHMT1-211ENST00000618902 BSPRYQ5W0U4 402 aa5.47□□□□□ -1.53
SHMT1-211ENST00000618902 NAIF1Q69YI7 327 aaPredicted RBP5.47□□□□□ -1.53
SHMT1-211ENST00000618902 OLFML1Q6UWY5 402 aa5.47□□□□□ -1.53
SHMT1-211ENST00000618902 LEKR1Q6ZMV7 388 aa5.47□□□□□ -1.53
SHMT1-211ENST00000618902 MMS22LQ6ZRQ5 1243 aa5.47□□□□□ -1.53
SHMT1-211ENST00000618902 MON1BQ7L1V2 547 aa5.47□□□□□ -1.53
SHMT1-211ENST00000618902 ZNF572Q7Z3I7 529 aaPredicted RBP5.47□□□□□ -1.53
SHMT1-211ENST00000618902 CACNA2D4Q7Z3S7 1137 aa5.47□□□□□ -1.53
SHMT1-211ENST00000618902 TRMT11Q7Z4G4 463 aaKnown RBP5.47□□□□□ -1.53
SHMT1-211ENST00000618902 ZNF677Q86XU0 584 aa5.47□□□□□ -1.53
SHMT1-211ENST00000618902 ZNF687Q8N1G0 1237 aa5.47□□□□□ -1.53
SHMT1-211ENST00000618902 CAMKK1Q8N5S9 505 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 1631.8 ms