RNA–Protein interactions for RNA: ENST00000617209.1

SRGAP2C-205, Transcript of SLIT-ROBO Rho GTPase activating protein 2C, humanhuman

TSL 5

Gene SRGAP2C, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2C-205ENST00000617209 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.1■□□□□ 0.17
SRGAP2C-205ENST00000617209 PLK2Q9NYY3 685 aa16.1■□□□□ 0.17
SRGAP2C-205ENST00000617209 NOCTQ9UK39 431 aaKnown RBP16.1■□□□□ 0.17
SRGAP2C-205ENST00000617209 ANTXRLA6NF34 631 aa16.09■□□□□ 0.17
SRGAP2C-205ENST00000617209 GFPT2O94808 682 aa16.09■□□□□ 0.17
SRGAP2C-205ENST00000617209 TRUB2O95900 331 aaKnown RBP16.09■□□□□ 0.17
SRGAP2C-205ENST00000617209 ERBB2P04626 1255 aa16.09■□□□□ 0.17
SRGAP2C-205ENST00000617209 MMEP08473 750 aa16.09■□□□□ 0.17
SRGAP2C-205ENST00000617209 TIE1P35590 1138 aa16.09■□□□□ 0.17
SRGAP2C-205ENST00000617209 DGKEP52429 567 aa16.09■□□□□ 0.17
SRGAP2C-205ENST00000617209 SEC13P55735 322 aa16.09■□□□□ 0.17
SRGAP2C-205ENST00000617209 CDK17Q00537 523 aa16.09■□□□□ 0.17
SRGAP2C-205ENST00000617209 CRY1Q16526 586 aa16.09■□□□□ 0.17
SRGAP2C-205ENST00000617209 FILIP1LQ4L180 1135 aa16.09■□□□□ 0.17
SRGAP2C-205ENST00000617209 DCAF6Q58WW2 860 aa16.09■□□□□ 0.17
SRGAP2C-205ENST00000617209 EOGTQ5NDL2 527 aa16.09■□□□□ 0.17
SRGAP2C-205ENST00000617209 C10orf76Q5T2E6 689 aa16.09■□□□□ 0.17
SRGAP2C-205ENST00000617209 RNF43Q68DV7 783 aa16.09■□□□□ 0.17
SRGAP2C-205ENST00000617209 OR6B2Q6IFH4 312 aa16.09■□□□□ 0.17
SRGAP2C-205ENST00000617209 FAM183BPQ6ZVS7 135 aa16.09■□□□□ 0.17
SRGAP2C-205ENST00000617209 ERICH1Q86X53 443 aa16.09■□□□□ 0.17
SRGAP2C-205ENST00000617209 ALLCQ8N6M5 410 aa16.09■□□□□ 0.17
SRGAP2C-205ENST00000617209 DDI1Q8WTU0 396 aa16.09■□□□□ 0.17
SRGAP2C-205ENST00000617209 DDX50Q9BQ39 737 aaKnown RBP16.09■□□□□ 0.17
SRGAP2C-205ENST00000617209 SYNCQ9H7C4 482 aa16.09■□□□□ 0.17
SRGAP2C-205ENST00000617209 RRN3Q9NYV6 651 aa16.09■□□□□ 0.17
SRGAP2C-205ENST00000617209 HCN2Q9UL51 889 aa16.09■□□□□ 0.17
SRGAP2C-205ENST00000617209 MYO6Q9UM54 1294 aa16.09■□□□□ 0.17
SRGAP2C-205ENST00000617209 SPAG17Q6Q759 2223 aa16.09■□□□□ 0.17
SRGAP2C-205ENST00000617209 GPR179Q6PRD1 2367 aa16.08■□□□□ 0.17
SRGAP2C-205ENST00000617209 A0A1B0GTH6 734 aa16.08■□□□□ 0.16
SRGAP2C-205ENST00000617209 A0A1W2PQC6 194 aa16.08■□□□□ 0.16
SRGAP2C-205ENST00000617209 PRRT4C9JH25 899 aa16.08■□□□□ 0.16
SRGAP2C-205ENST00000617209 TEX33O43247 280 aa16.08■□□□□ 0.16
SRGAP2C-205ENST00000617209 HRO43593 1189 aa16.08■□□□□ 0.16
SRGAP2C-205ENST00000617209 APBB3O95704 486 aa16.08■□□□□ 0.16
SRGAP2C-205ENST00000617209 CYP1A1P04798 512 aaPredicted RBP16.08■□□□□ 0.16
SRGAP2C-205ENST00000617209 SLC2A3P11169 496 aa16.08■□□□□ 0.16
SRGAP2C-205ENST00000617209 HNRNPLP14866 589 aaKnown RBP eCLIP16.08■□□□□ 0.16
SRGAP2C-205ENST00000617209 CHRNB2P17787 502 aa16.08■□□□□ 0.16
SRGAP2C-205ENST00000617209 GBP1P32455 592 aa16.08■□□□□ 0.16
SRGAP2C-205ENST00000617209 NOS2P35228 1153 aa16.08■□□□□ 0.16
SRGAP2C-205ENST00000617209 NOMO3P69849 1222 aa16.08■□□□□ 0.16
SRGAP2C-205ENST00000617209 MTA1Q13330 715 aa16.08■□□□□ 0.16
SRGAP2C-205ENST00000617209 E2F5Q15329 346 aa16.08■□□□□ 0.16
SRGAP2C-205ENST00000617209 FAM133BQ5BKY9 247 aaKnown RBP16.08■□□□□ 0.16
SRGAP2C-205ENST00000617209 PIK3R6Q5UE93 754 aa16.08■□□□□ 0.16
SRGAP2C-205ENST00000617209 TAF3Q5VWG9 929 aa16.08■□□□□ 0.16
SRGAP2C-205ENST00000617209 TRIM72Q6ZMU5 477 aa16.08■□□□□ 0.16
SRGAP2C-205ENST00000617209 ARCQ7LC44 396 aa16.08■□□□□ 0.16
SRGAP2C-205ENST00000617209 TAC4Q86UU9 113 aa16.08■□□□□ 0.16
SRGAP2C-205ENST00000617209 RASSF3Q86WH2 238 aa16.08■□□□□ 0.16
SRGAP2C-205ENST00000617209 DEFB106AQ8N104 65 aa16.08■□□□□ 0.16
SRGAP2C-205ENST00000617209 ZNF513Q8N8E2 541 aaPredicted RBP16.08■□□□□ 0.16
SRGAP2C-205ENST00000617209 TXNDC5Q8NBS9 432 aaKnown RBP16.08■□□□□ 0.16
SRGAP2C-205ENST00000617209 MSANTD4Q8NCY6 345 aa16.08■□□□□ 0.16
SRGAP2C-205ENST00000617209 BHMTQ93088 406 aa16.08■□□□□ 0.16
SRGAP2C-205ENST00000617209 CBX8Q9HC52 389 aa16.08■□□□□ 0.16
SRGAP2C-205ENST00000617209 FRYLO94915 3013 aa16.08■□□□□ 0.16
SRGAP2C-205ENST00000617209 SGK1O00141 431 aa16.07■□□□□ 0.16
SRGAP2C-205ENST00000617209 NPC1O15118 1278 aa16.07■□□□□ 0.16
SRGAP2C-205ENST00000617209 TIMM44O43615 452 aa16.07■□□□□ 0.16
SRGAP2C-205ENST00000617209 KLF8O95600 359 aaPredicted RBP16.07■□□□□ 0.16
SRGAP2C-205ENST00000617209 HOXD9P28356 352 aaPredicted RBP16.07■□□□□ 0.16
SRGAP2C-205ENST00000617209 NTSR1P30989 418 aa16.07■□□□□ 0.16
SRGAP2C-205ENST00000617209 HOXC13P31276 330 aa16.07■□□□□ 0.16
SRGAP2C-205ENST00000617209 MATKP42679 507 aa16.07■□□□□ 0.16
SRGAP2C-205ENST00000617209 FMO1Q01740 532 aa16.07■□□□□ 0.16
SRGAP2C-205ENST00000617209 NR1I3Q14994 352 aa16.07■□□□□ 0.16
SRGAP2C-205ENST00000617209 EIF4HQ15056 248 aaKnown RBP16.07■□□□□ 0.16
SRGAP2C-205ENST00000617209 HEATR6Q6AI08 1181 aaKnown RBP16.07■□□□□ 0.16
SRGAP2C-205ENST00000617209 KIAA0907Q7Z7F0 614 aaPredicted RBP16.07■□□□□ 0.16
SRGAP2C-205ENST00000617209 CCDC33Q8N5R6 958 aa16.07■□□□□ 0.16
SRGAP2C-205ENST00000617209 ZNF557Q8N988 423 aaPredicted RBP16.07■□□□□ 0.16
SRGAP2C-205ENST00000617209 ADAM32Q8TC27 787 aa16.07■□□□□ 0.16
SRGAP2C-205ENST00000617209 RUBCNQ92622 972 aa16.07■□□□□ 0.16
SRGAP2C-205ENST00000617209 NT5C3BQ969T7 300 aa16.07■□□□□ 0.16
SRGAP2C-205ENST00000617209 BTN2A3PQ96KV6 586 aa16.07■□□□□ 0.16
SRGAP2C-205ENST00000617209 POLR3BQ9NW08 1133 aaPredicted RBP16.07■□□□□ 0.16
SRGAP2C-205ENST00000617209 SLC12A6Q9UHW9 1150 aa16.07■□□□□ 0.16
SRGAP2C-205ENST00000617209 KCNU1A8MYU2 1149 aa16.06■□□□□ 0.16
SRGAP2C-205ENST00000617209 AXIN1O15169 862 aa16.06■□□□□ 0.16
SRGAP2C-205ENST00000617209 TSPAN3O60637 253 aa16.06■□□□□ 0.16
SRGAP2C-205ENST00000617209 ADAM23O75077 832 aa16.06■□□□□ 0.16
SRGAP2C-205ENST00000617209 DAB1O75553 588 aa16.06■□□□□ 0.16
SRGAP2C-205ENST00000617209 APOEP02649 317 aa16.06■□□□□ 0.16
SRGAP2C-205ENST00000617209 CCDC172P0C7W6 258 aa16.06■□□□□ 0.16
SRGAP2C-205ENST00000617209 MMP8P22894 467 aa16.06■□□□□ 0.16
SRGAP2C-205ENST00000617209 SLC6A4P31645 630 aa16.06■□□□□ 0.16
SRGAP2C-205ENST00000617209 TPM4P67936 248 aa16.06■□□□□ 0.16
SRGAP2C-205ENST00000617209 PITX1P78337 314 aaPredicted RBP16.06■□□□□ 0.16
SRGAP2C-205ENST00000617209 GEN1Q17RS7 908 aa16.06■□□□□ 0.16
SRGAP2C-205ENST00000617209 ZSCAN23Q3MJ62 389 aa16.06■□□□□ 0.16
SRGAP2C-205ENST00000617209 ZC3H12AQ5D1E8 599 aaKnown RBP16.06■□□□□ 0.16
SRGAP2C-205ENST00000617209 NADSYN1Q6IA69 706 aa16.06■□□□□ 0.16
SRGAP2C-205ENST00000617209 SDE2Q6IQ49 451 aa16.06■□□□□ 0.16
SRGAP2C-205ENST00000617209 TMEM92Q6UXU6 159 aa16.06■□□□□ 0.16
SRGAP2C-205ENST00000617209 CACNA2D4Q7Z3S7 1137 aa16.06■□□□□ 0.16
SRGAP2C-205ENST00000617209 XYLT1Q86Y38 959 aa16.06■□□□□ 0.16
SRGAP2C-205ENST00000617209 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms