RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 TLE6Q9H808 572 aa9.71□□□□□ -0.86
CLTCL1-208ENST00000615606 XPNPEP1Q9NQW7 623 aa9.71□□□□□ -0.86
CLTCL1-208ENST00000615606 ADAM28Q9UKQ2 775 aa9.71□□□□□ -0.86
CLTCL1-208ENST00000615606 OPLAHO14841 1288 aa9.71□□□□□ -0.86
CLTCL1-208ENST00000615606 SYN3O14994 580 aa9.71□□□□□ -0.86
CLTCL1-208ENST00000615606 DAB1O75553 588 aa9.71□□□□□ -0.86
CLTCL1-208ENST00000615606 PCDH8O95206 1070 aa9.71□□□□□ -0.86
CLTCL1-208ENST00000615606 SERPIND1P05546 499 aa9.71□□□□□ -0.86
CLTCL1-208ENST00000615606 GLI1P08151 1106 aa9.71□□□□□ -0.86
CLTCL1-208ENST00000615606 CYP2A6P11509 494 aaPredicted RBP9.71□□□□□ -0.86
CLTCL1-208ENST00000615606 LLGL2Q6P1M3 1020 aa9.71□□□□□ -0.86
CLTCL1-208ENST00000615606 PSRC1Q6PGN9 363 aaPredicted RBP9.71□□□□□ -0.86
CLTCL1-208ENST00000615606 SIAH1Q8IUQ4 282 aa9.71□□□□□ -0.86
CLTCL1-208ENST00000615606 SNX27Q96L92 541 aa9.71□□□□□ -0.86
CLTCL1-208ENST00000615606 TSEN34Q9BSV6 310 aaKnown RBP9.71□□□□□ -0.86
CLTCL1-208ENST00000615606 EIF2AQ9BY44 585 aaKnown RBP9.71□□□□□ -0.86
CLTCL1-208ENST00000615606 MRGBPQ9NV56 204 aa9.71□□□□□ -0.86
CLTCL1-208ENST00000615606 SHOC2Q9UQ13 582 aa9.71□□□□□ -0.86
CLTCL1-208ENST00000615606 AP5Z1O43299 807 aa9.7□□□□□ -0.86
CLTCL1-208ENST00000615606 GLP2RO95838 553 aa9.7□□□□□ -0.86
CLTCL1-208ENST00000615606 KCNA3P22001 575 aa9.7□□□□□ -0.86
CLTCL1-208ENST00000615606 POLR2LP62875 67 aaKnown RBP9.7□□□□□ -0.86
CLTCL1-208ENST00000615606 NOMO3P69849 1222 aa9.7□□□□□ -0.86
CLTCL1-208ENST00000615606 MRPS5P82675 430 aaKnown RBP9.7□□□□□ -0.86
CLTCL1-208ENST00000615606 FMO1Q01740 532 aa9.7□□□□□ -0.86
CLTCL1-208ENST00000615606 POU5F1Q01860 360 aaKnown RBP9.7□□□□□ -0.86
CLTCL1-208ENST00000615606 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.7□□□□□ -0.86
CLTCL1-208ENST00000615606 SERPINB12Q96P63 405 aa9.7□□□□□ -0.86
CLTCL1-208ENST00000615606 APOL2Q9BQE5 337 aa9.7□□□□□ -0.86
CLTCL1-208ENST00000615606 ADAM33Q9BZ11 813 aa9.7□□□□□ -0.86
CLTCL1-208ENST00000615606 CREBZFQ9NS37 354 aa9.7□□□□□ -0.86
CLTCL1-208ENST00000615606 ADAM21Q9UKJ8 722 aa9.7□□□□□ -0.86
CLTCL1-208ENST00000615606 ZNF510Q9Y2H8 683 aa9.7□□□□□ -0.86
CLTCL1-208ENST00000615606 TRIM49D1C9J1S8 452 aa9.7□□□□□ -0.86
CLTCL1-208ENST00000615606 KDELR1P24390 212 aa9.7□□□□□ -0.86
CLTCL1-208ENST00000615606 BCL2L1Q07817 233 aa9.7□□□□□ -0.86
CLTCL1-208ENST00000615606 SGCGQ13326 291 aa9.7□□□□□ -0.86
CLTCL1-208ENST00000615606 HIST2H2ACQ16777 129 aaPredicted RBP9.7□□□□□ -0.86
CLTCL1-208ENST00000615606 LDLRAD1Q5T700 205 aa9.7□□□□□ -0.86
CLTCL1-208ENST00000615606 MROH9Q5TGP6 573 aa9.7□□□□□ -0.86
CLTCL1-208ENST00000615606 HIST2H2AA3Q6FI13 130 aa9.7□□□□□ -0.86
CLTCL1-208ENST00000615606 TPGS1Q6ZTW0 290 aa9.7□□□□□ -0.86
CLTCL1-208ENST00000615606 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.7□□□□□ -0.86
CLTCL1-208ENST00000615606 C16orf59Q7L2K0 433 aa9.7□□□□□ -0.86
CLTCL1-208ENST00000615606 HOMEZQ8IX15 550 aa9.7□□□□□ -0.86
CLTCL1-208ENST00000615606 HJURPQ8NCD3 748 aaPredicted RBP9.7□□□□□ -0.86
CLTCL1-208ENST00000615606 DBF4BQ8NFT6 615 aa9.7□□□□□ -0.86
CLTCL1-208ENST00000615606 CASKIN2Q8WXE0 1202 aa9.7□□□□□ -0.86
CLTCL1-208ENST00000615606 MTBPQ96DY7 904 aa9.7□□□□□ -0.86
CLTCL1-208ENST00000615606 LRRC37BQ96QE4 947 aa9.7□□□□□ -0.86
CLTCL1-208ENST00000615606 GAS2L1Q99501 681 aaPredicted RBP9.7□□□□□ -0.86
CLTCL1-208ENST00000615606 NTPCRQ9BSD7 190 aaKnown RBP9.7□□□□□ -0.86
CLTCL1-208ENST00000615606 PABPC3Q9H361 631 aaKnown RBP9.7□□□□□ -0.86
CLTCL1-208ENST00000615606 FZD8Q9H461 694 aa9.7□□□□□ -0.86
CLTCL1-208ENST00000615606 CLCA2Q9UQC9 943 aa9.7□□□□□ -0.86
CLTCL1-208ENST00000615606 TBC1D3BA6NDS4 549 aa9.7□□□□□ -0.86
CLTCL1-208ENST00000615606 GJB6O95452 261 aa9.7□□□□□ -0.86
CLTCL1-208ENST00000615606 CLTBP09497 229 aa9.7□□□□□ -0.86
CLTCL1-208ENST00000615606 SERPINB8P50452 374 aa9.7□□□□□ -0.86
CLTCL1-208ENST00000615606 ABCE1P61221 599 aaKnown RBP9.7□□□□□ -0.86
CLTCL1-208ENST00000615606 TLE2Q04725 743 aa9.7□□□□□ -0.86
CLTCL1-208ENST00000615606 CAPRIN1Q14444 709 aaKnown RBP9.7□□□□□ -0.86
CLTCL1-208ENST00000615606 SLC29A2Q14542 456 aa9.7□□□□□ -0.86
CLTCL1-208ENST00000615606 PPP1R26Q5T8A7 1209 aaPredicted RBP9.7□□□□□ -0.86
CLTCL1-208ENST00000615606 SAPCD2Q86UD0 394 aa9.7□□□□□ -0.86
CLTCL1-208ENST00000615606 LRRC49Q8IUZ0 686 aa9.7□□□□□ -0.86
CLTCL1-208ENST00000615606 ZFP42Q96MM3 310 aa9.7□□□□□ -0.86
CLTCL1-208ENST00000615606 MYCBPQ99417 103 aaPredicted RBP9.7□□□□□ -0.86
CLTCL1-208ENST00000615606 LHX5Q9H2C1 402 aa9.7□□□□□ -0.86
CLTCL1-208ENST00000615606 GOLGA2P5Q9HBQ8 144 aa9.7□□□□□ -0.86
CLTCL1-208ENST00000615606 ALG13Q9NP73 1137 aaKnown RBP9.7□□□□□ -0.86
CLTCL1-208ENST00000615606 ZBTB22O15209 634 aa9.7□□□□□ -0.86
CLTCL1-208ENST00000615606 GYG2O15488 501 aa9.7□□□□□ -0.86
CLTCL1-208ENST00000615606 PYGMP11217 842 aa9.7□□□□□ -0.86
CLTCL1-208ENST00000615606 KRT4P19013 534 aa9.7□□□□□ -0.86
CLTCL1-208ENST00000615606 RFC1P35251 1148 aaPredicted RBP9.7□□□□□ -0.86
CLTCL1-208ENST00000615606 MMP13P45452 471 aa9.7□□□□□ -0.86
CLTCL1-208ENST00000615606 NPY2RP49146 381 aa9.7□□□□□ -0.86
CLTCL1-208ENST00000615606 DDR2Q16832 855 aa9.7□□□□□ -0.86
CLTCL1-208ENST00000615606 C15orf59Q2T9L4 293 aaPredicted RBP9.7□□□□□ -0.86
CLTCL1-208ENST00000615606 RAP1GAP2Q684P5 730 aa9.7□□□□□ -0.86
CLTCL1-208ENST00000615606 METTL3Q86U44 580 aaKnown RBP9.7□□□□□ -0.86
CLTCL1-208ENST00000615606 ZCCHC2Q9C0B9 1178 aaKnown RBP9.7□□□□□ -0.86
CLTCL1-208ENST00000615606 POLR1EQ9GZS1 481 aaKnown RBP9.7□□□□□ -0.86
CLTCL1-208ENST00000615606 TMEM161AQ9NX61 479 aa9.7□□□□□ -0.86
CLTCL1-208ENST00000615606 WWOXQ9NZC7 414 aa9.7□□□□□ -0.86
CLTCL1-208ENST00000615606 FAM153AQ9UHL3 310 aa9.7□□□□□ -0.86
CLTCL1-208ENST00000615606 CDY1Q9Y6F8 540 aa9.7□□□□□ -0.86
CLTCL1-208ENST00000615606 RNF103O00237 685 aa9.69□□□□□ -0.86
CLTCL1-208ENST00000615606 C4BPAP04003 597 aaKnown RBP9.69□□□□□ -0.86
CLTCL1-208ENST00000615606 CNTFP26441 200 aa9.69□□□□□ -0.86
CLTCL1-208ENST00000615606 MATKP42679 507 aa9.69□□□□□ -0.86
CLTCL1-208ENST00000615606 MAPK8P45983 427 aa9.69□□□□□ -0.86
CLTCL1-208ENST00000615606 SPDYAQ5MJ70 313 aa9.69□□□□□ -0.86
CLTCL1-208ENST00000615606 FUT10Q6P4F1 479 aa9.69□□□□□ -0.86
CLTCL1-208ENST00000615606 KCNT2Q6UVM3 1135 aa9.69□□□□□ -0.86
CLTCL1-208ENST00000615606 MYO1HQ8N1T3 1032 aa9.69□□□□□ -0.86
CLTCL1-208ENST00000615606 AGR3Q8TD06 166 aa9.69□□□□□ -0.86
CLTCL1-208ENST00000615606 BAP1Q92560 729 aa9.69□□□□□ -0.86
CLTCL1-208ENST00000615606 PPP1R16AQ96I34 528 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms