RNA–Protein interactions for RNA: ENST00000613795.4

CLCN3-211, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,874 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-211ENST00000613795 FEZF2Q8TBJ5 459 aa7.05□□□□□ -1.28
CLCN3-211ENST00000613795 HIST1H2AHQ96KK5 128 aa7.05□□□□□ -1.28
CLCN3-211ENST00000613795 HIST1H2AJQ99878 128 aa7.05□□□□□ -1.28
CLCN3-211ENST00000613795 H2AFJQ9BTM1 129 aa7.05□□□□□ -1.28
CLCN3-211ENST00000613795 NT5C1AQ9BXI3 368 aa7.05□□□□□ -1.28
CLCN3-211ENST00000613795 UGT2B28Q9BY64 529 aa7.05□□□□□ -1.28
CLCN3-211ENST00000613795 NUAK2Q9H093 628 aa7.05□□□□□ -1.28
CLCN3-211ENST00000613795 CASS4Q9NQ75 786 aa7.05□□□□□ -1.28
CLCN3-211ENST00000613795 ABCB10Q9NRK6 738 aa7.05□□□□□ -1.28
CLCN3-211ENST00000613795 RAPGEFL1Q9UHV5 662 aa7.05□□□□□ -1.28
CLCN3-211ENST00000613795 PCP4L1A6NKN8 68 aa7.05□□□□□ -1.28
CLCN3-211ENST00000613795 RARAP10276 462 aa7.05□□□□□ -1.28
CLCN3-211ENST00000613795 RBP3P10745 1247 aa7.05□□□□□ -1.28
CLCN3-211ENST00000613795 TSHRP16473 764 aa7.05□□□□□ -1.28
CLCN3-211ENST00000613795 ADORA2BP29275 332 aa7.05□□□□□ -1.28
CLCN3-211ENST00000613795 GRIK1P39086 918 aa7.05□□□□□ -1.28
CLCN3-211ENST00000613795 MPP3Q13368 585 aa7.05□□□□□ -1.28
CLCN3-211ENST00000613795 RRP1BQ14684 758 aaKnown RBP7.05□□□□□ -1.28
CLCN3-211ENST00000613795 ACAP1Q15027 740 aa7.05□□□□□ -1.28
CLCN3-211ENST00000613795 ARHGAP15Q53QZ3 475 aa7.05□□□□□ -1.28
CLCN3-211ENST00000613795 CDC42EP5Q6NZY7 148 aa7.05□□□□□ -1.28
CLCN3-211ENST00000613795 KYAT3Q6YP21 454 aaKnown RBP7.05□□□□□ -1.28
CLCN3-211ENST00000613795 ULK2Q8IYT8 1036 aa7.05□□□□□ -1.28
CLCN3-211ENST00000613795 EXD1Q8NHP7 514 aa7.05□□□□□ -1.28
CLCN3-211ENST00000613795 SPATA18Q8TC71 538 aa7.05□□□□□ -1.28
CLCN3-211ENST00000613795 RAET1EQ8TD07 263 aa7.05□□□□□ -1.28
CLCN3-211ENST00000613795 CDRT15Q96T59 188 aa7.05□□□□□ -1.28
CLCN3-211ENST00000613795 HDHD2Q9H0R4 259 aa7.05□□□□□ -1.28
CLCN3-211ENST00000613795 SERHL2Q9H4I8 314 aa7.05□□□□□ -1.28
CLCN3-211ENST00000613795 PCDH9Q9HC56 1237 aa7.05□□□□□ -1.28
CLCN3-211ENST00000613795 SERHLQ9NQF3 203 aa7.05□□□□□ -1.28
CLCN3-211ENST00000613795 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.05□□□□□ -1.28
CLCN3-211ENST00000613795 SALL1Q9NSC2 1324 aa7.05□□□□□ -1.28
CLCN3-211ENST00000613795 PREX1Q8TCU6 1659 aa7.05□□□□□ -1.28
CLCN3-211ENST00000613795 EFCAB10A6NFE3 127 aa7.04□□□□□ -1.28
CLCN3-211ENST00000613795 ZNF263O14978 683 aa7.04□□□□□ -1.28
CLCN3-211ENST00000613795 MPOP05164 745 aa7.04□□□□□ -1.28
CLCN3-211ENST00000613795 PAEPP09466 180 aa7.04□□□□□ -1.28
CLCN3-211ENST00000613795 SLC26A3P40879 764 aa7.04□□□□□ -1.28
CLCN3-211ENST00000613795 MTMR2Q13614 643 aa7.04□□□□□ -1.28
CLCN3-211ENST00000613795 NCOA4Q13772 614 aa7.04□□□□□ -1.28
CLCN3-211ENST00000613795 SNRNP35Q16560 246 aaKnown RBP7.04□□□□□ -1.28
CLCN3-211ENST00000613795 C15orf59Q2T9L4 293 aaPredicted RBP7.04□□□□□ -1.28
CLCN3-211ENST00000613795 TMEM26Q6ZUK4 368 aa7.04□□□□□ -1.28
CLCN3-211ENST00000613795 BNIPLQ7Z465 357 aa7.04□□□□□ -1.28
CLCN3-211ENST00000613795 MICALL2Q8IY33 904 aa7.04□□□□□ -1.28
CLCN3-211ENST00000613795 BHLHE22Q8NFJ8 381 aaPredicted RBP7.04□□□□□ -1.28
CLCN3-211ENST00000613795 PSMA8Q8TAA3 256 aa7.04□□□□□ -1.28
CLCN3-211ENST00000613795 S100A14Q9HCY8 104 aa7.04□□□□□ -1.28
CLCN3-211ENST00000613795 ENTPD7Q9NQZ7 604 aa7.04□□□□□ -1.28
CLCN3-211ENST00000613795 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.04□□□□□ -1.288e-6■□□□□ 8.7
CLCN3-211ENST00000613795 EHD3Q9NZN3 535 aa7.04□□□□□ -1.28
CLCN3-211ENST00000613795 FADS3Q9Y5Q0 445 aa7.04□□□□□ -1.28
CLCN3-211ENST00000613795 LRRIQ1Q96JM4 1722 aa7.04□□□□□ -1.28
CLCN3-211ENST00000613795 A0A1W2PRG6 482 aa7.04□□□□□ -1.28
CLCN3-211ENST00000613795 TRIM64CA6NLI5 447 aa7.04□□□□□ -1.28
CLCN3-211ENST00000613795 NOTOA8MTQ0 251 aa7.04□□□□□ -1.28
CLCN3-211ENST00000613795 TK2O00142 265 aa7.04□□□□□ -1.28
CLCN3-211ENST00000613795 DNM1LO00429 736 aa7.04□□□□□ -1.28
CLCN3-211ENST00000613795 ATP9BO43861 1147 aa7.04□□□□□ -1.28
CLCN3-211ENST00000613795 NDUFB10O96000 172 aa7.04□□□□□ -1.28
CLCN3-211ENST00000613795 IL6P05231 212 aa7.04□□□□□ -1.28
CLCN3-211ENST00000613795 ICAM1P05362 532 aa7.04□□□□□ -1.28
CLCN3-211ENST00000613795 TKTP29401 623 aaKnown RBP7.04□□□□□ -1.28
CLCN3-211ENST00000613795 RGS4P49798 205 aa7.04□□□□□ -1.28
CLCN3-211ENST00000613795 KPNA1P52294 538 aaPredicted RBP7.04□□□□□ -1.28
CLCN3-211ENST00000613795 IST1P53990 364 aa7.04□□□□□ -1.28
CLCN3-211ENST00000613795 NAB1Q13506 487 aa7.04□□□□□ -1.28
CLCN3-211ENST00000613795 ATF7IP2Q5U623 682 aa7.04□□□□□ -1.28
CLCN3-211ENST00000613795 GPR107Q5VW38 600 aa7.04□□□□□ -1.28
CLCN3-211ENST00000613795 USP49Q70CQ1 688 aa7.04□□□□□ -1.28
CLCN3-211ENST00000613795 WDR36Q8NI36 951 aaKnown RBP7.04□□□□□ -1.28
CLCN3-211ENST00000613795 EGFL8Q99944 293 aa7.04□□□□□ -1.28
CLCN3-211ENST00000613795 GPATCH1Q9BRR8 931 aaKnown RBP7.04□□□□□ -1.28
CLCN3-211ENST00000613795 TMEM106CQ9BVX2 250 aa7.04□□□□□ -1.28
CLCN3-211ENST00000613795 NIF3L1Q9GZT8 377 aa7.04□□□□□ -1.28
CLCN3-211ENST00000613795 DNAJC5Q9H3Z4 198 aa7.04□□□□□ -1.28
CLCN3-211ENST00000613795 MARCH7Q9H992 704 aa7.04□□□□□ -1.28
CLCN3-211ENST00000613795 AP3M1Q9Y2T2 418 aa7.04□□□□□ -1.28
CLCN3-211ENST00000613795 SH3BP1Q9Y3L3 701 aa7.04□□□□□ -1.28
CLCN3-211ENST00000613795 CNTNAP5Q8WYK1 1306 aa7.04□□□□□ -1.28
CLCN3-211ENST00000613795 LRRC10BA6NIK2 292 aa7.04□□□□□ -1.28
CLCN3-211ENST00000613795 EEF2KO00418 725 aaKnown RBP7.04□□□□□ -1.28
CLCN3-211ENST00000613795 UBDO15205 165 aa7.04□□□□□ -1.28
CLCN3-211ENST00000613795 NMT2O60551 498 aa7.04□□□□□ -1.28
CLCN3-211ENST00000613795 CST8O60676 142 aa7.04□□□□□ -1.28
CLCN3-211ENST00000613795 SERPINA6P08185 405 aa7.04□□□□□ -1.28
CLCN3-211ENST00000613795 NR3C2P08235 984 aa7.04□□□□□ -1.28
CLCN3-211ENST00000613795 GPD1P21695 349 aa7.04□□□□□ -1.28
CLCN3-211ENST00000613795 HK2P52789 917 aa7.04□□□□□ -1.28
CLCN3-211ENST00000613795 MRPS22P82650 360 aaKnown RBP7.04□□□□□ -1.28
CLCN3-211ENST00000613795 AGAP9Q5VTM2 703 aa7.04□□□□□ -1.28
CLCN3-211ENST00000613795 PALB2Q86YC2 1186 aa7.04□□□□□ -1.28
CLCN3-211ENST00000613795 KBTBD2Q8IY47 623 aa7.04□□□□□ -1.28
CLCN3-211ENST00000613795 LRRC17Q8N6Y2 441 aa7.04□□□□□ -1.28
CLCN3-211ENST00000613795 ATP6V0D2Q8N8Y2 350 aa7.04□□□□□ -1.28
CLCN3-211ENST00000613795 POP5Q969H6 163 aaKnown RBP7.04□□□□□ -1.28
CLCN3-211ENST00000613795 NSMCE2Q96MF7 247 aa7.04□□□□□ -1.28
CLCN3-211ENST00000613795 KRT84Q9NSB2 600 aa7.04□□□□□ -1.28
CLCN3-211ENST00000613795 KLHL11Q9NVR0 708 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms