RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 KRT81Q14533 505 aa17.04■□□□□ 0.32
CNOT3-208ENST00000613073 RNASEH2BQ5TBB1 312 aaKnown RBP17.04■□□□□ 0.32
CNOT3-208ENST00000613073 UNC93AQ86WB7 457 aa17.04■□□□□ 0.32
CNOT3-208ENST00000613073 TTC13Q8NBP0 860 aa17.04■□□□□ 0.32
CNOT3-208ENST00000613073 SOCS4Q8WXH5 440 aa17.04■□□□□ 0.32
CNOT3-208ENST00000613073 FAM124BQ9H5Z6 455 aaPredicted RBP17.04■□□□□ 0.32
CNOT3-208ENST00000613073 USP1O94782 785 aa17.04■□□□□ 0.32
CNOT3-208ENST00000613073 FAM163BP0C2L3 166 aa17.04■□□□□ 0.32
CNOT3-208ENST00000613073 RARBP10826 455 aa17.04■□□□□ 0.32
CNOT3-208ENST00000613073 ACAT1P24752 427 aaKnown RBP17.04■□□□□ 0.32
CNOT3-208ENST00000613073 AFF1P51825 1210 aaKnown RBP17.04■□□□□ 0.32
CNOT3-208ENST00000613073 DPYSL3Q14195 570 aa17.04■□□□□ 0.32
CNOT3-208ENST00000613073 ANKRD22Q5VYY1 191 aa17.04■□□□□ 0.32
CNOT3-208ENST00000613073 ZBED8Q8IZ13 594 aa17.04■□□□□ 0.32
CNOT3-208ENST00000613073 WNT8BQ93098 351 aa17.04■□□□□ 0.32
CNOT3-208ENST00000613073 PLEKHG4BQ96PX9 1271 aa17.04■□□□□ 0.32
CNOT3-208ENST00000613073 BTBD10Q9BSF8 475 aa17.04■□□□□ 0.32
CNOT3-208ENST00000613073 MAGEB5Q9BZ81 275 aa17.04■□□□□ 0.32
CNOT3-208ENST00000613073 FAM192AQ9GZU8 254 aa17.04■□□□□ 0.32
CNOT3-208ENST00000613073 RSAD1Q9HA92 442 aa17.04■□□□□ 0.32
CNOT3-208ENST00000613073 APOC4-APOC2K7ER74 178 aa17.03■□□□□ 0.32
CNOT3-208ENST00000613073 CCDC22O60826 627 aa17.03■□□□□ 0.32
CNOT3-208ENST00000613073 PFDN1O60925 122 aa17.03■□□□□ 0.32
CNOT3-208ENST00000613073 ATP6V1G1O75348 118 aa17.03■□□□□ 0.32
CNOT3-208ENST00000613073 APOC2P02655 101 aa17.03■□□□□ 0.32
CNOT3-208ENST00000613073 LILRA4P59901 499 aa17.03■□□□□ 0.32
CNOT3-208ENST00000613073 ZBTB16Q05516 673 aa17.03■□□□□ 0.32
CNOT3-208ENST00000613073 IRF5Q13568 498 aa17.03■□□□□ 0.32
CNOT3-208ENST00000613073 CA9Q16790 459 aa17.03■□□□□ 0.32
CNOT3-208ENST00000613073 LRRC36Q1X8D7 754 aa17.03■□□□□ 0.32
CNOT3-208ENST00000613073 CTC1Q2NKJ3 1217 aa17.03■□□□□ 0.32
CNOT3-208ENST00000613073 PPP6R3Q5H9R7 873 aaPredicted RBP17.03■□□□□ 0.32
CNOT3-208ENST00000613073 ISLR2Q6UXK2 745 aa17.03■□□□□ 0.32
CNOT3-208ENST00000613073 RINLQ6ZS11 566 aa17.03■□□□□ 0.32
CNOT3-208ENST00000613073 NDRG1Q92597 394 aaKnown RBP17.03■□□□□ 0.32
CNOT3-208ENST00000613073 AZIN2Q96A70 460 aa17.03■□□□□ 0.32
CNOT3-208ENST00000613073 ZNF560Q96MR9 790 aa17.03■□□□□ 0.32
CNOT3-208ENST00000613073 TTC1Q99614 292 aa17.03■□□□□ 0.32
CNOT3-208ENST00000613073 HEY2Q9UBP5 337 aa17.03■□□□□ 0.32
CNOT3-208ENST00000613073 CDY2AQ9Y6F7 541 aa17.03■□□□□ 0.32
CNOT3-208ENST00000613073 TRAFD1O14545 582 aaPredicted RBP17.03■□□□□ 0.32
CNOT3-208ENST00000613073 MCF2LO15068 1137 aa17.03■□□□□ 0.32
CNOT3-208ENST00000613073 HUS1O60921 280 aa17.03■□□□□ 0.32
CNOT3-208ENST00000613073 HAUS5O94927 633 aa17.03■□□□□ 0.32
CNOT3-208ENST00000613073 IMPDH2P12268 514 aa17.03■□□□□ 0.32
CNOT3-208ENST00000613073 KCNE1P15382 129 aa17.03■□□□□ 0.32
CNOT3-208ENST00000613073 RPL22P35268 128 aaKnown RBP17.03■□□□□ 0.32
CNOT3-208ENST00000613073 MORF4L2Q15014 288 aa17.03■□□□□ 0.32
CNOT3-208ENST00000613073 LIN52Q52LA3 116 aa17.03■□□□□ 0.32
CNOT3-208ENST00000613073 ANKMY2Q8IV38 441 aa17.03■□□□□ 0.32
CNOT3-208ENST00000613073 ADGRF2Q8IZF7 708 aa17.03■□□□□ 0.32
CNOT3-208ENST00000613073 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.03■□□□□ 0.32
CNOT3-208ENST00000613073 NMD3Q96D46 503 aaKnown RBP17.03■□□□□ 0.32
CNOT3-208ENST00000613073 DNAJC1Q96KC8 554 aaKnown RBP17.03■□□□□ 0.32
CNOT3-208ENST00000613073 CCDC77Q9BR77 488 aa17.03■□□□□ 0.32
CNOT3-208ENST00000613073 Q9Y3F1 56 aa17.03■□□□□ 0.32
CNOT3-208ENST00000613073 HEY1Q9Y5J3 304 aa17.03■□□□□ 0.32
CNOT3-208ENST00000613073 CLDN5O00501 218 aa17.02■□□□□ 0.32
CNOT3-208ENST00000613073 PTGESO14684 152 aa17.02■□□□□ 0.32
CNOT3-208ENST00000613073 OPHN1O60890 802 aa17.02■□□□□ 0.32
CNOT3-208ENST00000613073 FAM200BP0CF97 657 aa17.02■□□□□ 0.32
CNOT3-208ENST00000613073 BST2Q10589 180 aaKnown RBP17.02■□□□□ 0.32
CNOT3-208ENST00000613073 PDIA2Q13087 525 aaKnown RBP17.02■□□□□ 0.32
CNOT3-208ENST00000613073 DARS2Q6PI48 645 aaKnown RBP17.02■□□□□ 0.32
CNOT3-208ENST00000613073 LVRNQ6Q4G3 990 aa17.02■□□□□ 0.32
CNOT3-208ENST00000613073 CEP128Q6ZU80 1094 aa17.02■□□□□ 0.32
CNOT3-208ENST00000613073 TRABD2AQ86V40 505 aa17.02■□□□□ 0.32
CNOT3-208ENST00000613073 RIBC1Q8N443 379 aaPredicted RBP17.02■□□□□ 0.32
CNOT3-208ENST00000613073 ANKRD52Q8NB46 1076 aa17.02■□□□□ 0.32
CNOT3-208ENST00000613073 LPPQ93052 612 aa17.02■□□□□ 0.32
CNOT3-208ENST00000613073 HIC2Q96JB3 615 aa17.02■□□□□ 0.32
CNOT3-208ENST00000613073 FAM161BQ96MY7 647 aa17.02■□□□□ 0.32
CNOT3-208ENST00000613073 LGALS13Q9UHV8 139 aa17.02■□□□□ 0.32
CNOT3-208ENST00000613073 GABRQQ9UN88 632 aa17.02■□□□□ 0.32
CNOT3-208ENST00000613073 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.02■□□□□ 0.32
CNOT3-208ENST00000613073 A0A1W2PPM1 405 aa17.02■□□□□ 0.31
CNOT3-208ENST00000613073 TCRBV7S3A2A0A539 114 aa17.02■□□□□ 0.31
CNOT3-208ENST00000613073 XPOTO43592 962 aaKnown RBP17.02■□□□□ 0.31
CNOT3-208ENST00000613073 COQ9O75208 318 aa17.02■□□□□ 0.31
CNOT3-208ENST00000613073 TKTP29401 623 aaKnown RBP17.02■□□□□ 0.31
CNOT3-208ENST00000613073 TRIM32Q13049 653 aa17.02■□□□□ 0.31
CNOT3-208ENST00000613073 PDK4Q16654 411 aa17.02■□□□□ 0.31
CNOT3-208ENST00000613073 XKR4Q5GH76 650 aa17.02■□□□□ 0.31
CNOT3-208ENST00000613073 MDH1BQ5I0G3 518 aa17.02■□□□□ 0.31
CNOT3-208ENST00000613073 ARHGAP17Q68EM7 881 aa17.02■□□□□ 0.31
CNOT3-208ENST00000613073 GDF6Q6KF10 455 aaPredicted RBP17.02■□□□□ 0.31
CNOT3-208ENST00000613073 TTC7BQ86TV6 843 aa17.02■□□□□ 0.31
CNOT3-208ENST00000613073 OSTM1Q86WC4 334 aa17.02■□□□□ 0.31
CNOT3-208ENST00000613073 NME8Q8N427 588 aa17.02■□□□□ 0.31
CNOT3-208ENST00000613073 MAML1Q92585 1016 aa17.02■□□□□ 0.31
CNOT3-208ENST00000613073 SMC6Q96SB8 1091 aa17.02■□□□□ 0.31
CNOT3-208ENST00000613073 SNRNP25Q9BV90 132 aaKnown RBP17.02■□□□□ 0.31
CNOT3-208ENST00000613073 TLE6Q9H808 572 aa17.02■□□□□ 0.31
CNOT3-208ENST00000613073 VPS37BQ9H9H4 285 aa17.02■□□□□ 0.31
CNOT3-208ENST00000613073 ARMCX1Q9P291 453 aa17.02■□□□□ 0.31
CNOT3-208ENST00000613073 STX18Q9P2W9 335 aaKnown RBP17.02■□□□□ 0.31
CNOT3-208ENST00000613073 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.01■□□□□ 0.31
CNOT3-208ENST00000613073 DUSP11O75319 330 aaKnown RBP17.01■□□□□ 0.31
CNOT3-208ENST00000613073 IL4RP24394 825 aa17.01■□□□□ 0.31
CNOT3-208ENST00000613073 HDAC4P56524 1084 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms