RNA–Protein interactions for RNA: ENST00000612509.4

SEMA3B-211, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-211ENST00000612509 MPPE1Q53F39 396 aa18.79■□□□□ 0.6
SEMA3B-211ENST00000612509 C2CD6Q53TS8 623 aa18.79■□□□□ 0.6
SEMA3B-211ENST00000612509 FAM133BQ5BKY9 247 aaKnown RBP18.79■□□□□ 0.6
SEMA3B-211ENST00000612509 FAM102AQ5T9C2 384 aaPredicted RBP18.79■□□□□ 0.6
SEMA3B-211ENST00000612509 SYT13Q7L8C5 426 aa18.79■□□□□ 0.6
SEMA3B-211ENST00000612509 DDI1Q8WTU0 396 aa18.79■□□□□ 0.6
SEMA3B-211ENST00000612509 FBXO10Q9UK96 956 aa18.79■□□□□ 0.6
SEMA3B-211ENST00000612509 MYO6Q9UM54 1294 aa18.79■□□□□ 0.6
SEMA3B-211ENST00000612509 MYO15AQ9UKN7 3530 aa18.78■□□□□ 0.6
SEMA3B-211ENST00000612509 TSPAN3O60637 253 aa18.78■□□□□ 0.6
SEMA3B-211ENST00000612509 LILRB5O75023 590 aa18.78■□□□□ 0.6
SEMA3B-211ENST00000612509 MOCS2O96007 188 aaPredicted RBP18.78■□□□□ 0.6
SEMA3B-211ENST00000612509 CISD3P0C7P0 127 aa18.78■□□□□ 0.6
SEMA3B-211ENST00000612509 FERP16591 822 aa18.78■□□□□ 0.6
SEMA3B-211ENST00000612509 HOXD9P28356 352 aaPredicted RBP18.78■□□□□ 0.6
SEMA3B-211ENST00000612509 SLC6A4P31645 630 aa18.78■□□□□ 0.6
SEMA3B-211ENST00000612509 MRE11P49959 708 aa18.78■□□□□ 0.6
SEMA3B-211ENST00000612509 SGSHP51688 502 aa18.78■□□□□ 0.6
SEMA3B-211ENST00000612509 EIF4EBP2Q13542 120 aaPredicted RBP18.78■□□□□ 0.6
SEMA3B-211ENST00000612509 HSF5Q4G112 596 aaPredicted RBP18.78■□□□□ 0.6
SEMA3B-211ENST00000612509 OTUD1Q5VV17 481 aaPredicted RBP18.78■□□□□ 0.6
SEMA3B-211ENST00000612509 NADSYN1Q6IA69 706 aa18.78■□□□□ 0.6
SEMA3B-211ENST00000612509 MMS22LQ6ZRQ5 1243 aa18.78■□□□□ 0.6
SEMA3B-211ENST00000612509 NUDT18Q6ZVK8 323 aa18.78■□□□□ 0.6
SEMA3B-211ENST00000612509 ALLCQ8N6M5 410 aa18.78■□□□□ 0.6
SEMA3B-211ENST00000612509 ATRIPQ8WXE1 791 aa18.78■□□□□ 0.6
SEMA3B-211ENST00000612509 NKD2Q969F2 451 aaPredicted RBP18.78■□□□□ 0.6
SEMA3B-211ENST00000612509 AZIN2Q96A70 460 aa18.78■□□□□ 0.6
SEMA3B-211ENST00000612509 PRICKLE1Q96MT3 831 aaPredicted RBP18.78■□□□□ 0.6
SEMA3B-211ENST00000612509 HHIPQ96QV1 700 aa18.78■□□□□ 0.6
SEMA3B-211ENST00000612509 PCDHB18PQ96TA0 734 aa18.78■□□□□ 0.6
SEMA3B-211ENST00000612509 TTYH3Q9C0H2 523 aa18.78■□□□□ 0.6
SEMA3B-211ENST00000612509 DDIT4Q9NX09 232 aa18.78■□□□□ 0.6
SEMA3B-211ENST00000612509 MMP17Q9ULZ9 603 aa18.78■□□□□ 0.6
SEMA3B-211ENST00000612509 SYNJ2BP-COX16A0A087WUM0 186 aa18.77■□□□□ 0.6
SEMA3B-211ENST00000612509 GOLGA6L7A0A1B0GV03 622 aa18.77■□□□□ 0.6
SEMA3B-211ENST00000612509 LRRC53A6NM62 1247 aa18.77■□□□□ 0.6
SEMA3B-211ENST00000612509 KLF8O95600 359 aaPredicted RBP18.77■□□□□ 0.6
SEMA3B-211ENST00000612509 CCDC172P0C7W6 258 aa18.77■□□□□ 0.6
SEMA3B-211ENST00000612509 UNGP13051 313 aaPredicted RBP18.77■□□□□ 0.6
SEMA3B-211ENST00000612509 MMP8P22894 467 aa18.77■□□□□ 0.6
SEMA3B-211ENST00000612509 HOXA6P31267 233 aa18.77■□□□□ 0.6
SEMA3B-211ENST00000612509 NOS2P35228 1153 aa18.77■□□□□ 0.6
SEMA3B-211ENST00000612509 MATKP42679 507 aa18.77■□□□□ 0.6
SEMA3B-211ENST00000612509 FNTBP49356 437 aa18.77■□□□□ 0.6
SEMA3B-211ENST00000612509 UBASH3AP57075 661 aa18.77■□□□□ 0.6
SEMA3B-211ENST00000612509 CENPCQ03188 943 aa18.77■□□□□ 0.6
SEMA3B-211ENST00000612509 ZC3H12AQ5D1E8 599 aaKnown RBP18.77■□□□□ 0.6
SEMA3B-211ENST00000612509 EMC10Q5UCC4 262 aa18.77■□□□□ 0.6
SEMA3B-211ENST00000612509 HEATR6Q6AI08 1181 aaKnown RBP18.77■□□□□ 0.6
SEMA3B-211ENST00000612509 RFWD3Q6PCD5 774 aa18.77■□□□□ 0.6
SEMA3B-211ENST00000612509 LRSAM1Q6UWE0 723 aa18.77■□□□□ 0.6
SEMA3B-211ENST00000612509 CCDC33Q8N5R6 958 aa18.77■□□□□ 0.6
SEMA3B-211ENST00000612509 ZNF513Q8N8E2 541 aaPredicted RBP18.77■□□□□ 0.6
SEMA3B-211ENST00000612509 IL17RCQ8NAC3 791 aa18.77■□□□□ 0.6
SEMA3B-211ENST00000612509 TXNDC5Q8NBS9 432 aaKnown RBP18.77■□□□□ 0.6
SEMA3B-211ENST00000612509 C11orf70Q9BRQ4 267 aa18.77■□□□□ 0.6
SEMA3B-211ENST00000612509 NUCKS1Q9H1E3 243 aaKnown RBP18.77■□□□□ 0.6
SEMA3B-211ENST00000612509 TSPY26PQ9H489 355 aa18.77■□□□□ 0.6
SEMA3B-211ENST00000612509 ZDHHC4Q9NPG8 344 aa18.77■□□□□ 0.6
SEMA3B-211ENST00000612509 SEPT11Q9NVA2 429 aaKnown RBP18.77■□□□□ 0.6
SEMA3B-211ENST00000612509 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.77■□□□□ 0.63e-6■□□□□ 10
SEMA3B-211ENST00000612509 COX16Q9P0S2 106 aa18.77■□□□□ 0.6
SEMA3B-211ENST00000612509 XPO7Q9UIA9 1087 aaKnown RBP18.77■□□□□ 0.6
SEMA3B-211ENST00000612509 CLEC4EQ9ULY5 219 aa18.77■□□□□ 0.6
SEMA3B-211ENST00000612509 STAP1Q9ULZ2 295 aa18.77■□□□□ 0.6
SEMA3B-211ENST00000612509 SLC27A6Q9Y2P4 619 aa18.77■□□□□ 0.6
SEMA3B-211ENST00000612509 PRR23AA6NEV1 266 aa18.76■□□□□ 0.59
SEMA3B-211ENST00000612509 PRRT4C9JH25 899 aa18.76■□□□□ 0.59
SEMA3B-211ENST00000612509 GOLGA8SH3BPF8 625 aa18.76■□□□□ 0.59
SEMA3B-211ENST00000612509 GBP1P32455 592 aa18.76■□□□□ 0.59
SEMA3B-211ENST00000612509 PBX1P40424 430 aa18.76■□□□□ 0.59
SEMA3B-211ENST00000612509 NSFP46459 744 aaKnown RBP18.76■□□□□ 0.59
SEMA3B-211ENST00000612509 CLEC16AQ2KHT3 1053 aa18.76■□□□□ 0.59
SEMA3B-211ENST00000612509 PIK3R6Q5UE93 754 aa18.76■□□□□ 0.59
SEMA3B-211ENST00000612509 TRMT11Q7Z4G4 463 aaKnown RBP18.76■□□□□ 0.59
SEMA3B-211ENST00000612509 ANKS1BQ7Z6G8 1248 aa18.76■□□□□ 0.59
SEMA3B-211ENST00000612509 ALYREFQ86V81 257 aaKnown RBP18.76■□□□□ 0.59
SEMA3B-211ENST00000612509 LONP2Q86WA8 852 aa18.76■□□□□ 0.59
SEMA3B-211ENST00000612509 SLC30A5Q8TAD4 765 aa18.76■□□□□ 0.59
SEMA3B-211ENST00000612509 KCNV2Q8TDN2 545 aa18.76■□□□□ 0.59
SEMA3B-211ENST00000612509 AGPAT1Q99943 283 aa18.76■□□□□ 0.59
SEMA3B-211ENST00000612509 DDX50Q9BQ39 737 aaKnown RBP18.76■□□□□ 0.59
SEMA3B-211ENST00000612509 IRX2Q9BZI1 471 aaPredicted RBP18.76■□□□□ 0.59
SEMA3B-211ENST00000612509 SEMA4AQ9H3S1 761 aa18.76■□□□□ 0.59
SEMA3B-211ENST00000612509 RRN3Q9NYV6 651 aa18.76■□□□□ 0.59
SEMA3B-211ENST00000612509 HCN2Q9UL51 889 aa18.76■□□□□ 0.59
SEMA3B-211ENST00000612509 STARD13Q9Y3M8 1113 aa18.76■□□□□ 0.59
SEMA3B-211ENST00000612509 MYO18AQ92614 2054 aaKnown RBP18.76■□□□□ 0.59
SEMA3B-211ENST00000612509 DMDP11532 3685 aa18.76■□□□□ 0.59
SEMA3B-211ENST00000612509 SGK1O00141 431 aa18.75■□□□□ 0.59
SEMA3B-211ENST00000612509 APBB3O95704 486 aa18.75■□□□□ 0.59
SEMA3B-211ENST00000612509 HOXD11P31277 338 aaPredicted RBP18.75■□□□□ 0.59
SEMA3B-211ENST00000612509 CCR1P32246 355 aa18.75■□□□□ 0.59
SEMA3B-211ENST00000612509 FLT3P36888 993 aa18.75■□□□□ 0.59
SEMA3B-211ENST00000612509 PXNP49023 591 aaPredicted RBP18.75■□□□□ 0.59
SEMA3B-211ENST00000612509 SULT1E1P49888 294 aa18.75■□□□□ 0.59
SEMA3B-211ENST00000612509 RNASE9P60153 205 aaKnown RBP18.75■□□□□ 0.59
SEMA3B-211ENST00000612509 ASIC2Q16515 512 aa18.75■□□□□ 0.59
SEMA3B-211ENST00000612509 GEN1Q17RS7 908 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms