RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 FOLH1Q04609 750 aa23.05■■□□□ 1.28
SHANK2-220ENST00000608988 TBL3Q12788 808 aaKnown RBP23.05■■□□□ 1.28
SHANK2-220ENST00000608988 DLG1Q12959 904 aa23.05■■□□□ 1.28
SHANK2-220ENST00000608988 MXD4Q14582 209 aaPredicted RBP23.05■■□□□ 1.28
SHANK2-220ENST00000608988 PCLAFQ15004 111 aa23.05■■□□□ 1.28
SHANK2-220ENST00000608988 HSP90AA5PQ58FG0 334 aa23.05■■□□□ 1.28
SHANK2-220ENST00000608988 SYCP2LQ5T4T6 812 aa23.05■■□□□ 1.28
SHANK2-220ENST00000608988 AFG1LQ8WV93 481 aa23.05■■□□□ 1.28
SHANK2-220ENST00000608988 HIC2Q96JB3 615 aa23.05■■□□□ 1.28
SHANK2-220ENST00000608988 UBE2OQ9C0C9 1292 aaKnown RBP23.05■■□□□ 1.28
SHANK2-220ENST00000608988 VRTNQ9H8Y1 702 aa23.05■■□□□ 1.28
SHANK2-220ENST00000608988 ADAMTS5Q9UNA0 930 aa23.05■■□□□ 1.28
SHANK2-220ENST00000608988 CDY2AQ9Y6F7 541 aa23.05■■□□□ 1.28
SHANK2-220ENST00000608988 CDY1Q9Y6F8 540 aa23.05■■□□□ 1.28
SHANK2-220ENST00000608988 H3BNX3 289 aa23.04■■□□□ 1.28
SHANK2-220ENST00000608988 ZNF195O14628 629 aa23.04■■□□□ 1.28
SHANK2-220ENST00000608988 MX2P20592 715 aa23.04■■□□□ 1.28
SHANK2-220ENST00000608988 ABCE1P61221 599 aaKnown RBP23.04■■□□□ 1.28
SHANK2-220ENST00000608988 RPL10AP62906 217 aaKnown RBP23.04■■□□□ 1.28
SHANK2-220ENST00000608988 MTMR2Q13614 643 aa23.04■■□□□ 1.28
SHANK2-220ENST00000608988 FAXCQ5TGI0 409 aa23.04■■□□□ 1.28
SHANK2-220ENST00000608988 ZFP1Q6P2D0 407 aa23.04■■□□□ 1.28
SHANK2-220ENST00000608988 TSHZ1Q6ZSZ6 1077 aa23.04■■□□□ 1.28
SHANK2-220ENST00000608988 DEFB107AQ8IZN7 70 aa23.04■■□□□ 1.28
SHANK2-220ENST00000608988 PCDH19Q8TAB3 1148 aa23.04■■□□□ 1.28
SHANK2-220ENST00000608988 STON2Q8WXE9 905 aa23.04■■□□□ 1.28
SHANK2-220ENST00000608988 FAM167AQ96KS9 214 aa23.04■■□□□ 1.28
SHANK2-220ENST00000608988 PRICKLE1Q96MT3 831 aaPredicted RBP23.04■■□□□ 1.28
SHANK2-220ENST00000608988 SORT1Q99523 831 aa23.04■■□□□ 1.28
SHANK2-220ENST00000608988 SERPINI1Q99574 410 aa23.04■■□□□ 1.28
SHANK2-220ENST00000608988 NAT9Q9BTE0 207 aa23.04■■□□□ 1.28
SHANK2-220ENST00000608988 SUDS3Q9H7L9 328 aaPredicted RBP23.04■■□□□ 1.28
SHANK2-220ENST00000608988 ACAD9Q9H845 621 aa23.04■■□□□ 1.28
SHANK2-220ENST00000608988 CIDEBQ9UHD4 219 aa23.04■■□□□ 1.28
SHANK2-220ENST00000608988 FER1L6Q2WGJ9 1857 aa23.03■■□□□ 1.28
SHANK2-220ENST00000608988 C15orf38-AP3S2A0A0A6YYH1 394 aa23.03■■□□□ 1.28
SHANK2-220ENST00000608988 STRNO43815 780 aa23.03■■□□□ 1.28
SHANK2-220ENST00000608988 LYPLA1O75608 230 aaPredicted RBP23.03■■□□□ 1.28
SHANK2-220ENST00000608988 SNAPC2Q13487 334 aa23.03■■□□□ 1.28
SHANK2-220ENST00000608988 STXBP2Q15833 593 aa23.03■■□□□ 1.28
SHANK2-220ENST00000608988 CCDC153Q494R4 210 aa23.03■■□□□ 1.28
SHANK2-220ENST00000608988 MAVSQ7Z434 540 aa23.03■■□□□ 1.28
SHANK2-220ENST00000608988 ARPINQ7Z6K5 226 aa23.03■■□□□ 1.28
SHANK2-220ENST00000608988 POU5F2Q8N7G0 328 aa23.03■■□□□ 1.28
SHANK2-220ENST00000608988 PRPF31Q8WWY3 499 aaKnown RBP23.03■■□□□ 1.28
SHANK2-220ENST00000608988 IRGQQ8WZA9 623 aa23.03■■□□□ 1.28
SHANK2-220ENST00000608988 VPS33BQ9H267 617 aa23.03■■□□□ 1.28
SHANK2-220ENST00000608988 XPNPEP3Q9NQH7 507 aa23.03■■□□□ 1.28
SHANK2-220ENST00000608988 MORF4L1Q9UBU8 362 aa23.03■■□□□ 1.28
SHANK2-220ENST00000608988 VPS28Q9UK41 221 aa23.03■■□□□ 1.28
SHANK2-220ENST00000608988 HEY1Q9Y5J3 304 aa23.03■■□□□ 1.28
SHANK2-220ENST00000608988 H2AFYO75367 372 aaKnown RBP23.02■■□□□ 1.28
SHANK2-220ENST00000608988 TMCC1O94876 653 aa23.02■■□□□ 1.28
SHANK2-220ENST00000608988 ASLP04424 464 aa23.02■■□□□ 1.28
SHANK2-220ENST00000608988 COX4I1P13073 169 aa23.02■■□□□ 1.28
SHANK2-220ENST00000608988 RAP1GAPP47736 663 aa23.02■■□□□ 1.28
SHANK2-220ENST00000608988 HSPA13P48723 471 aa23.02■■□□□ 1.28
SHANK2-220ENST00000608988 PDE1CQ14123 709 aaPredicted RBP23.02■■□□□ 1.28
SHANK2-220ENST00000608988 STILQ15468 1287 aa23.02■■□□□ 1.28
SHANK2-220ENST00000608988 PACS1Q6VY07 963 aa23.02■■□□□ 1.28
SHANK2-220ENST00000608988 HACE1Q8IYU2 909 aa23.02■■□□□ 1.28
SHANK2-220ENST00000608988 PQLC1Q8N2U9 271 aa23.02■■□□□ 1.28
SHANK2-220ENST00000608988 TFB1MQ8WVM0 346 aaKnown RBP23.02■■□□□ 1.28
SHANK2-220ENST00000608988 QKIQ96PU8 341 aaKnown RBP eCLIP23.02■■□□□ 1.28
SHANK2-220ENST00000608988 MRPS26Q9BYN8 205 aaKnown RBP23.02■■□□□ 1.28
SHANK2-220ENST00000608988 ELOVL4Q9GZR5 314 aa23.02■■□□□ 1.28
SHANK2-220ENST00000608988 EIF2B3Q9NR50 452 aaKnown RBP23.02■■□□□ 1.28
SHANK2-220ENST00000608988 SLC22A2O15244 555 aa23.02■■□□□ 1.28
SHANK2-220ENST00000608988 RAD17O75943 681 aa23.02■■□□□ 1.28
SHANK2-220ENST00000608988 PDE5AO76074 875 aa23.02■■□□□ 1.28
SHANK2-220ENST00000608988 SMIM18P0DKX4 95 aa23.02■■□□□ 1.28
SHANK2-220ENST00000608988 GARSP41250 739 aaKnown RBP23.02■■□□□ 1.28
SHANK2-220ENST00000608988 ALDH1A3P47895 512 aa23.02■■□□□ 1.28
SHANK2-220ENST00000608988 NUMBP49757 651 aa23.02■■□□□ 1.28
SHANK2-220ENST00000608988 SP2Q02086 613 aa23.02■■□□□ 1.28
SHANK2-220ENST00000608988 B3GNT6Q6ZMB0 384 aa23.02■■□□□ 1.28
SHANK2-220ENST00000608988 KRT27Q7Z3Y8 459 aa23.02■■□□□ 1.28
SHANK2-220ENST00000608988 AHI1Q8N157 1196 aa23.02■■□□□ 1.28
SHANK2-220ENST00000608988 ITFG2Q969R8 447 aa23.02■■□□□ 1.28
SHANK2-220ENST00000608988 PRDM16Q9HAZ2 1276 aa23.02■■□□□ 1.28
SHANK2-220ENST00000608988 PTPRHQ9HD43 1115 aa23.02■■□□□ 1.28
SHANK2-220ENST00000608988 ADAM28Q9UKQ2 775 aa23.02■■□□□ 1.28
SHANK2-220ENST00000608988 PHIPQ8WWQ0 1821 aa23.01■■□□□ 1.27
SHANK2-220ENST00000608988 TMEM114B3SHH9 223 aa23.01■■□□□ 1.27
SHANK2-220ENST00000608988 TPP1O14773 563 aa23.01■■□□□ 1.27
SHANK2-220ENST00000608988 METTL18O95568 372 aa23.01■■□□□ 1.27
SHANK2-220ENST00000608988 ALDOAP04075 364 aaKnown RBP23.01■■□□□ 1.27
SHANK2-220ENST00000608988 RALBP11234 206 aa23.01■■□□□ 1.27
SHANK2-220ENST00000608988 HK2P52789 917 aa23.01■■□□□ 1.27
SHANK2-220ENST00000608988 TBC1D25Q3MII6 688 aa23.01■■□□□ 1.27
SHANK2-220ENST00000608988 OR6B2Q6IFH4 312 aa23.01■■□□□ 1.27
SHANK2-220ENST00000608988 ZNF526Q8TF50 670 aaPredicted RBP23.01■■□□□ 1.27
SHANK2-220ENST00000608988 GBA2Q9HCG7 927 aaPredicted RBP23.01■■□□□ 1.27
SHANK2-220ENST00000608988 COPG2Q9UBF2 871 aa23.01■■□□□ 1.27
SHANK2-220ENST00000608988 STK39Q9UEW8 545 aa23.01■■□□□ 1.27
SHANK2-220ENST00000608988 ZNF214Q9UL59 606 aaPredicted RBP23.01■■□□□ 1.27
SHANK2-220ENST00000608988 PCDHB12Q9Y5F1 795 aa23.01■■□□□ 1.27
SHANK2-220ENST00000608988 ERFP50548 548 aa23■■□□□ 1.27
SHANK2-220ENST00000608988 HIRAP54198 1017 aaPredicted RBP23■■□□□ 1.27
SHANK2-220ENST00000608988 ADRM1Q16186 407 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms