RNA–Protein interactions for RNA: ENST00000606066.1

CTSA-211, Transcript of cathepsin A, humanhuman

TSL 5

Gene CTSA, Length 603 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-211ENST00000606066 FAM3CQ92520 227 aa14.84□□□□□ -0.03
CTSA-211ENST00000606066 RNF34Q969K3 372 aa14.84□□□□□ -0.03
CTSA-211ENST00000606066 PGAP3Q96FM1 320 aaPredicted RBP14.84□□□□□ -0.03
CTSA-211ENST00000606066 SLC39A13Q96H72 371 aa14.84□□□□□ -0.03
CTSA-211ENST00000606066 NPY6RQ99463 290 aa14.84□□□□□ -0.03
CTSA-211ENST00000606066 DDX50Q9BQ39 737 aaKnown RBP14.84□□□□□ -0.03
CTSA-211ENST00000606066 ISCUQ9H1K1 167 aa14.84□□□□□ -0.03
CTSA-211ENST00000606066 SPHK2Q9NRA0 654 aa14.84□□□□□ -0.03
CTSA-211ENST00000606066 PARVAQ9NVD7 372 aa14.84□□□□□ -0.03
CTSA-211ENST00000606066 IMPACTQ9P2X3 320 aa14.84□□□□□ -0.03
CTSA-211ENST00000606066 MYO16Q9Y6X6 1858 aa14.84□□□□□ -0.03
CTSA-211ENST00000606066 ANAPC1Q9H1A4 1944 aa14.84□□□□□ -0.03
CTSA-211ENST00000606066 A0A087X0T9 212 aa14.83□□□□□ -0.04
CTSA-211ENST00000606066 KANSL1LA0AUZ9 987 aa14.83□□□□□ -0.04
CTSA-211ENST00000606066 GOLGA6L3A6NEY3 463 aa14.83□□□□□ -0.04
CTSA-211ENST00000606066 CYBBP04839 570 aa14.83□□□□□ -0.04
CTSA-211ENST00000606066 CYP17A1P05093 508 aa14.83□□□□□ -0.04
CTSA-211ENST00000606066 FAM228BP0C875 321 aa14.83□□□□□ -0.04
CTSA-211ENST00000606066 PDGFRAP16234 1089 aa14.83□□□□□ -0.04
CTSA-211ENST00000606066 ABCB4P21439 1286 aa14.83□□□□□ -0.04
CTSA-211ENST00000606066 CTHP32929 405 aa14.83□□□□□ -0.04
CTSA-211ENST00000606066 GJA4P35212 333 aa14.83□□□□□ -0.04
CTSA-211ENST00000606066 FLT3P36888 993 aa14.83□□□□□ -0.04
CTSA-211ENST00000606066 SULT1E1P49888 294 aa14.83□□□□□ -0.04
CTSA-211ENST00000606066 NME3Q13232 169 aa14.83□□□□□ -0.04
CTSA-211ENST00000606066 EIF4EBP2Q13542 120 aaPredicted RBP14.83□□□□□ -0.04
CTSA-211ENST00000606066 ANGPT1Q15389 498 aa14.83□□□□□ -0.04
CTSA-211ENST00000606066 SLC18A3Q16572 532 aa14.83□□□□□ -0.04
CTSA-211ENST00000606066 CCDC122Q5T0U0 273 aa14.83□□□□□ -0.04
CTSA-211ENST00000606066 ALKBH5Q6P6C2 394 aaKnown RBP14.83□□□□□ -0.04
CTSA-211ENST00000606066 DCUN1D2Q6PH85 259 aa14.83□□□□□ -0.04
CTSA-211ENST00000606066 RHBDF2Q6PJF5 856 aa14.83□□□□□ -0.04
CTSA-211ENST00000606066 TC2NQ8N9U0 490 aa14.83□□□□□ -0.04
CTSA-211ENST00000606066 NT5C3BQ969T7 300 aa14.83□□□□□ -0.04
CTSA-211ENST00000606066 FCRL2Q96LA5 508 aaPredicted RBP14.83□□□□□ -0.04
CTSA-211ENST00000606066 IRX2Q9BZI1 471 aaPredicted RBP14.83□□□□□ -0.04
CTSA-211ENST00000606066 NHEJ1Q9H9Q4 299 aaPredicted RBP14.83□□□□□ -0.04
CTSA-211ENST00000606066 MRPL47Q9HD33 250 aaKnown RBP14.83□□□□□ -0.04
CTSA-211ENST00000606066 STOML2Q9UJZ1 356 aa14.83□□□□□ -0.04
CTSA-211ENST00000606066 SCINQ9Y6U3 715 aa14.83□□□□□ -0.04
CTSA-211ENST00000606066 SYNJ2BP-COX16A0A087WUM0 186 aa14.82□□□□□ -0.04
CTSA-211ENST00000606066 OTOL1A6NHN0 477 aaPredicted RBP14.82□□□□□ -0.04
CTSA-211ENST00000606066 C2CD4BA6NLJ0 364 aa14.82□□□□□ -0.04
CTSA-211ENST00000606066 NCAM2O15394 837 aa14.82□□□□□ -0.04
CTSA-211ENST00000606066 ACSL4O60488 711 aa14.82□□□□□ -0.04
CTSA-211ENST00000606066 ADH5P11766 374 aa14.82□□□□□ -0.04
CTSA-211ENST00000606066 RFC1P35251 1148 aaPredicted RBP14.82□□□□□ -0.04
CTSA-211ENST00000606066 ID4P47928 161 aa14.82□□□□□ -0.04
CTSA-211ENST00000606066 SOX9P48436 509 aa14.82□□□□□ -0.04
CTSA-211ENST00000606066 DEUP1Q05D60 604 aa14.82□□□□□ -0.04
CTSA-211ENST00000606066 PPP2R5DQ14738 602 aa14.82□□□□□ -0.04
CTSA-211ENST00000606066 ANO4Q32M45 955 aa14.82□□□□□ -0.04
CTSA-211ENST00000606066 PREPLQ4J6C6 727 aaPredicted RBP14.82□□□□□ -0.04
CTSA-211ENST00000606066 ZC3H12AQ5D1E8 599 aaKnown RBP14.82□□□□□ -0.04
CTSA-211ENST00000606066 LY6G5CQ5SRR4 150 aa14.82□□□□□ -0.04
CTSA-211ENST00000606066 ADGRF1Q5T601 910 aa14.82□□□□□ -0.04
CTSA-211ENST00000606066 PLEKHA7Q6IQ23 1121 aa14.82□□□□□ -0.04
CTSA-211ENST00000606066 TMEM25Q86YD3 366 aa14.82□□□□□ -0.04
CTSA-211ENST00000606066 FAM217AQ8IXS0 508 aa14.82□□□□□ -0.04
CTSA-211ENST00000606066 CPXM2Q8N436 756 aa14.82□□□□□ -0.04
CTSA-211ENST00000606066 EMC1Q8N766 993 aa14.82□□□□□ -0.04
CTSA-211ENST00000606066 ATP6V0D2Q8N8Y2 350 aa14.82□□□□□ -0.04
CTSA-211ENST00000606066 RXFP2Q8WXD0 754 aa14.82□□□□□ -0.04
CTSA-211ENST00000606066 ZNF653Q96CK0 615 aa14.82□□□□□ -0.04
CTSA-211ENST00000606066 BTN2A3PQ96KV6 586 aa14.82□□□□□ -0.04
CTSA-211ENST00000606066 XPO6Q96QU8 1125 aaKnown RBP14.82□□□□□ -0.04
CTSA-211ENST00000606066 PANX2Q96RD6 677 aa14.82□□□□□ -0.04
CTSA-211ENST00000606066 WDCPQ9H6R7 721 aa14.82□□□□□ -0.04
CTSA-211ENST00000606066 TBC1D17Q9HA65 648 aa14.82□□□□□ -0.04
CTSA-211ENST00000606066 MARK1Q9P0L2 795 aa14.82□□□□□ -0.04
CTSA-211ENST00000606066 COX16Q9P0S2 106 aa14.82□□□□□ -0.04
CTSA-211ENST00000606066 CNOT8Q9UFF9 292 aaKnown RBP14.82□□□□□ -0.04
CTSA-211ENST00000606066 KMT2EQ8IZD2 1858 aa14.82□□□□□ -0.04
CTSA-211ENST00000606066 FRYLO94915 3013 aa14.81□□□□□ -0.04
CTSA-211ENST00000606066 TCRBV5S1A1TA0A578 114 aa14.81□□□□□ -0.04
CTSA-211ENST00000606066 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.81□□□□□ -0.04
CTSA-211ENST00000606066 HOXC11O43248 304 aaPredicted RBP14.81□□□□□ -0.04
CTSA-211ENST00000606066 GPD1P21695 349 aa14.81□□□□□ -0.04
CTSA-211ENST00000606066 RDXP35241 583 aaKnown RBP14.81□□□□□ -0.04
CTSA-211ENST00000606066 EIF2DP41214 584 aaKnown RBP14.81□□□□□ -0.04
CTSA-211ENST00000606066 PTPN9P43378 593 aa14.81□□□□□ -0.04
CTSA-211ENST00000606066 PITX1P78337 314 aaPredicted RBP14.81□□□□□ -0.04
CTSA-211ENST00000606066 GFPT1Q06210 699 aaPredicted RBP14.81□□□□□ -0.04
CTSA-211ENST00000606066 MAMLD1Q13495 774 aa14.81□□□□□ -0.04
CTSA-211ENST00000606066 ASTE1Q2TB18 679 aaPredicted RBP14.81□□□□□ -0.04
CTSA-211ENST00000606066 BRMS1LQ5PSV4 323 aa14.81□□□□□ -0.04
CTSA-211ENST00000606066 PPP1R15BQ5SWA1 713 aa14.81□□□□□ -0.04
CTSA-211ENST00000606066 ACBD5Q5T8D3 534 aaPredicted RBP14.81□□□□□ -0.04
CTSA-211ENST00000606066 TPGS1Q6ZTW0 290 aa14.81□□□□□ -0.04
CTSA-211ENST00000606066 STRADAQ7RTN6 431 aa14.81□□□□□ -0.04
CTSA-211ENST00000606066 JOSD2Q8TAC2 188 aa14.81□□□□□ -0.04
CTSA-211ENST00000606066 CFAP57Q96MR6 1250 aa14.81□□□□□ -0.04
CTSA-211ENST00000606066 MCEEQ96PE7 176 aa14.81□□□□□ -0.04
CTSA-211ENST00000606066 TBCBQ99426 244 aa14.81□□□□□ -0.04
CTSA-211ENST00000606066 CHP1Q99653 195 aa14.81□□□□□ -0.04
CTSA-211ENST00000606066 P2RY13Q9BPV8 354 aa14.81□□□□□ -0.04
CTSA-211ENST00000606066 BBS2Q9BXC9 721 aa14.81□□□□□ -0.04
CTSA-211ENST00000606066 OSBPL6Q9BZF3 934 aa14.81□□□□□ -0.04
CTSA-211ENST00000606066 MYO10Q9HD67 2058 aa14.81□□□□□ -0.04
CTSA-211ENST00000606066 TYW5A2RUC4 315 aaKnown RBP14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms